RNA–Protein interactions for RNA: ENST00000502987.5

SNCA-207, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 731 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-207ENST00000502987 KCNQ2O43526 872 aa15.03■□□□□ -0
SNCA-207ENST00000502987 USP54Q70EL1 1684 aa15.03■□□□□ -0
SNCA-207ENST00000502987 TESK2Q96S53 571 aa15.02■□□□□ -0
SNCA-207ENST00000502987 RGPD3A6NKT7 1758 aaPredicted RBP15.01□□□□□ -0.01
SNCA-207ENST00000502987 RGPD4Q7Z3J3 1758 aa15.01□□□□□ -0.01
SNCA-207ENST00000502987 AMPHP49418 695 aa15.01□□□□□ -0.01
SNCA-207ENST00000502987 TMF1P82094 1093 aa15.01□□□□□ -0.01
SNCA-207ENST00000502987 TXNRD1Q16881 649 aa15.01□□□□□ -0.01
SNCA-207ENST00000502987 IP6K1Q92551 441 aa15.01□□□□□ -0.01
SNCA-207ENST00000502987 TNS2Q63HR2 1409 aa15□□□□□ -0.01
SNCA-207ENST00000502987 NINLQ9Y2I6 1382 aa15□□□□□ -0.01
SNCA-207ENST00000502987 PROM2Q8N271 834 aa15□□□□□ -0.01
SNCA-207ENST00000502987 STK32BQ9NY57 414 aa15□□□□□ -0.01
SNCA-207ENST00000502987 BCL9O00512 1426 aa15□□□□□ -0.01
SNCA-207ENST00000502987 DDX54Q8TDD1 881 aaKnown RBP14.99□□□□□ -0.01
SNCA-207ENST00000502987 ANO8Q9HCE9 1232 aaPredicted RBP14.99□□□□□ -0.01
SNCA-207ENST00000502987 FBLN1P23142 703 aa14.98□□□□□ -0.01
SNCA-207ENST00000502987 ZBTB7AO95365 584 aa14.97□□□□□ -0.01
SNCA-207ENST00000502987 PCGF6Q9BYE7 350 aa14.97□□□□□ -0.01
SNCA-207ENST00000502987 USP47Q96K76 1375 aa14.97□□□□□ -0.01
SNCA-207ENST00000502987 HOXC9P31274 260 aa14.96□□□□□ -0.01
SNCA-207ENST00000502987 SLC15A2Q16348 729 aa14.96□□□□□ -0.01
SNCA-207ENST00000502987 CDCA8Q53HL2 280 aa14.96□□□□□ -0.01
SNCA-207ENST00000502987 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.01
SNCA-207ENST00000502987 MAP3K19Q56UN5 1328 aa14.95□□□□□ -0.02
SNCA-207ENST00000502987 SYTL4Q96C24 671 aaPredicted RBP14.95□□□□□ -0.02
SNCA-207ENST00000502987 PDGFDQ9GZP0 370 aaPredicted RBP14.95□□□□□ -0.02
SNCA-207ENST00000502987 NHSQ6T4R5 1651 aa14.95□□□□□ -0.02
SNCA-207ENST00000502987 ANKRD36BQ8N2N9 1353 aa14.95□□□□□ -0.02
SNCA-207ENST00000502987 FAM208AQ9UK61 1670 aaKnown RBP14.94□□□□□ -0.02
SNCA-207ENST00000502987 RGPD2P0DJD1 1756 aa14.94□□□□□ -0.02
SNCA-207ENST00000502987 RRS1Q15050 365 aaKnown RBP14.94□□□□□ -0.02
SNCA-207ENST00000502987 BTAF1O14981 1849 aa14.94□□□□□ -0.02
SNCA-207ENST00000502987 FYB1O15117 783 aa14.93□□□□□ -0.02
SNCA-207ENST00000502987 CHADLQ6NUI6 762 aa14.92□□□□□ -0.02
SNCA-207ENST00000502987 ZCRB1Q8TBF4 217 aaKnown RBP14.92□□□□□ -0.02
SNCA-207ENST00000502987 POLR3GLQ9BT43 218 aa14.92□□□□□ -0.02
SNCA-207ENST00000502987 CASZ1Q86V15 1759 aa14.91□□□□□ -0.02
SNCA-207ENST00000502987 PRIM1P49642 420 aaKnown RBP14.9□□□□□ -0.02
SNCA-207ENST00000502987 USHBP1Q8N6Y0 703 aa14.9□□□□□ -0.02
SNCA-207ENST00000502987 RAPGEF4Q8WZA2 1011 aa14.9□□□□□ -0.02
SNCA-207ENST00000502987 SMG6Q86US8 1419 aaKnown RBP14.9□□□□□ -0.02
SNCA-207ENST00000502987 KIF20BQ96Q89 1820 aa14.89□□□□□ -0.03
SNCA-207ENST00000502987 YY1P25490 414 aa14.89□□□□□ -0.03
SNCA-207ENST00000502987 NBPF6Q5VWK0 638 aa14.89□□□□□ -0.03
SNCA-207ENST00000502987 NBPF4Q96M43 638 aa14.89□□□□□ -0.03
SNCA-207ENST00000502987 PPM1GO15355 546 aaPredicted RBP14.88□□□□□ -0.03
SNCA-207ENST00000502987 MTFR1LQ9H019 292 aa14.88□□□□□ -0.03
SNCA-207ENST00000502987 TIMELESSQ9UNS1 1208 aa14.88□□□□□ -0.03
SNCA-207ENST00000502987 RTL1A6NKG5 1358 aa14.87□□□□□ -0.03
SNCA-207ENST00000502987 C19orf67A6NJJ6 358 aa14.87□□□□□ -0.03
SNCA-207ENST00000502987 TATP17735 454 aaPredicted RBP14.87□□□□□ -0.03
SNCA-207ENST00000502987 LRRC4BQ9NT99 713 aa14.87□□□□□ -0.03
SNCA-207ENST00000502987 PRR29P0C7W0 189 aa14.86□□□□□ -0.03
SNCA-207ENST00000502987 PTGER2P43116 358 aa14.86□□□□□ -0.03
SNCA-207ENST00000502987 HSP90AB2PQ58FF8 381 aa14.86□□□□□ -0.03
SNCA-207ENST00000502987 MYOM1P52179 1685 aa14.85□□□□□ -0.03
SNCA-207ENST00000502987 KCNQ4P56696 695 aa14.85□□□□□ -0.03
SNCA-207ENST00000502987 ZNF827Q17R98 1081 aa14.85□□□□□ -0.03
SNCA-207ENST00000502987 SLC27A3Q5K4L6 730 aa14.85□□□□□ -0.03
SNCA-207ENST00000502987 TFCP2L1Q9NZI6 479 aa14.85□□□□□ -0.03
SNCA-207ENST00000502987 DOT1LQ8TEK3 1739 aa14.85□□□□□ -0.03
SNCA-207ENST00000502987 MEGF6O75095 1541 aa14.84□□□□□ -0.03
SNCA-207ENST00000502987 CARD14Q9BXL6 1004 aa14.84□□□□□ -0.03
SNCA-207ENST00000502987 FHDC1Q9C0D6 1143 aaPredicted RBP14.84□□□□□ -0.03
SNCA-207ENST00000502987 CGNL1Q0VF96 1302 aa14.84□□□□□ -0.03
SNCA-207ENST00000502987 NSD3Q9BZ95 1437 aa14.83□□□□□ -0.03
SNCA-207ENST00000502987 KLHL34Q8N239 644 aa14.83□□□□□ -0.04
SNCA-207ENST00000502987 ARXQ96QS3 562 aa14.83□□□□□ -0.04
SNCA-207ENST00000502987 INSRP06213 1382 aa14.83□□□□□ -0.04
SNCA-207ENST00000502987 FLT4P35916 1363 aa14.83□□□□□ -0.04
SNCA-207ENST00000502987 SYT17Q9BSW7 474 aa14.82□□□□□ -0.04
SNCA-207ENST00000502987 CCNL1Q9UK58 526 aaPredicted RBP14.82□□□□□ -0.04
SNCA-207ENST00000502987 EMILIN1Q9Y6C2 1016 aa14.82□□□□□ -0.04
SNCA-207ENST00000502987 SHANK3Q9BYB0 1731 aa14.82□□□□□ -0.04
SNCA-207ENST00000502987 CLSPNQ9HAW4 1339 aa14.82□□□□□ -0.04
SNCA-207ENST00000502987 MAP2P11137 1827 aaKnown RBP14.81□□□□□ -0.04
SNCA-207ENST00000502987 POLD1P28340 1107 aa14.81□□□□□ -0.04
SNCA-207ENST00000502987 CCER1Q8TC90 406 aaPredicted RBP14.81□□□□□ -0.04
SNCA-207ENST00000502987 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
SNCA-207ENST00000502987 TNNT2P45379 298 aaPredicted RBP14.8□□□□□ -0.04
SNCA-207ENST00000502987 MPRIPQ6WCQ1 1025 aa14.8□□□□□ -0.04
SNCA-207ENST00000502987 SLC16A10Q8TF71 515 aa14.8□□□□□ -0.04
SNCA-207ENST00000502987 PCDH11XQ9BZA7 1347 aa14.8□□□□□ -0.04
SNCA-207ENST00000502987 PCDH11YQ9BZA8 1340 aa14.8□□□□□ -0.04
SNCA-207ENST00000502987 KIF24Q5T7B8 1368 aa14.79□□□□□ -0.04
SNCA-207ENST00000502987 LY75O60449 1722 aa14.78□□□□□ -0.04
SNCA-207ENST00000502987 EIF4G2P78344 907 aaKnown RBP eCLIP14.78□□□□□ -0.04
SNCA-207ENST00000502987 SGIP1Q9BQI5 828 aa14.78□□□□□ -0.04
SNCA-207ENST00000502987 NSD2O96028 1365 aa14.77□□□□□ -0.04
SNCA-207ENST00000502987 PNPLA7Q6ZV29 1317 aa14.77□□□□□ -0.04
SNCA-207ENST00000502987 SPG7Q9UQ90 795 aa14.77□□□□□ -0.05
SNCA-207ENST00000502987 TUBGCP6Q96RT7 1819 aa14.76□□□□□ -0.05
SNCA-207ENST00000502987 QSER1Q2KHR3 1735 aa14.76□□□□□ -0.05
SNCA-207ENST00000502987 GPR162Q16538 588 aa14.76□□□□□ -0.05
SNCA-207ENST00000502987 PELP1Q8IZL8 1130 aaKnown RBP14.76□□□□□ -0.05
SNCA-207ENST00000502987 WASHC2AQ641Q2 1341 aa14.75□□□□□ -0.05
SNCA-207ENST00000502987 CYP27B1O15528 508 aa14.75□□□□□ -0.05
SNCA-207ENST00000502987 HSPA5P11021 654 aaKnown RBP14.75□□□□□ -0.05
SNCA-207ENST00000502987 HMGB2P26583 209 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms