RNA–Protein interactions for RNA: ENST00000502734.1

COPB2-202, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 680 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-202ENST00000502734 RTL1A6NKG5 1358 aa12.49□□□□□ -0.41
COPB2-202ENST00000502734 CGNL1Q0VF96 1302 aa12.49□□□□□ -0.41
COPB2-202ENST00000502734 USHBP1Q8N6Y0 703 aa12.49□□□□□ -0.41
COPB2-202ENST00000502734 POLR3GLQ9BT43 218 aa12.49□□□□□ -0.41
COPB2-202ENST00000502734 WNK3Q9BYP7 1800 aa12.48□□□□□ -0.41
COPB2-202ENST00000502734 TATP17735 454 aaPredicted RBP12.48□□□□□ -0.41
COPB2-202ENST00000502734 EIF4G2P78344 907 aaKnown RBP eCLIP12.48□□□□□ -0.41
COPB2-202ENST00000502734 SLC27A3Q5K4L6 730 aa12.48□□□□□ -0.41
COPB2-202ENST00000502734 CCER1Q8TC90 406 aaPredicted RBP12.48□□□□□ -0.41
COPB2-202ENST00000502734 LRRC4BQ9NT99 713 aa12.48□□□□□ -0.41
COPB2-202ENST00000502734 INSRP06213 1382 aa12.47□□□□□ -0.41
COPB2-202ENST00000502734 PPM1GO15355 546 aaPredicted RBP12.47□□□□□ -0.41
COPB2-202ENST00000502734 PTGER2P43116 358 aa12.47□□□□□ -0.41
COPB2-202ENST00000502734 MTFR1LQ9H019 292 aa12.47□□□□□ -0.41
COPB2-202ENST00000502734 RGPD3A6NKT7 1758 aaPredicted RBP12.47□□□□□ -0.41
COPB2-202ENST00000502734 RGPD4Q7Z3J3 1758 aa12.47□□□□□ -0.41
COPB2-202ENST00000502734 KIF24Q5T7B8 1368 aa12.46□□□□□ -0.41
COPB2-202ENST00000502734 RNF39Q9H2S5 420 aa12.46□□□□□ -0.41
COPB2-202ENST00000502734 EMILIN1Q9Y6C2 1016 aa12.46□□□□□ -0.41
COPB2-202ENST00000502734 SMG6Q86US8 1419 aaKnown RBP12.45□□□□□ -0.42
COPB2-202ENST00000502734 NSD3Q9BZ95 1437 aa12.45□□□□□ -0.42
COPB2-202ENST00000502734 FLT4P35916 1363 aa12.45□□□□□ -0.42
COPB2-202ENST00000502734 HSPA5P11021 654 aaKnown RBP12.45□□□□□ -0.42
COPB2-202ENST00000502734 AKT1S1Q96B36 256 aa12.45□□□□□ -0.42
COPB2-202ENST00000502734 WASHC2AQ641Q2 1341 aa12.44□□□□□ -0.42
COPB2-202ENST00000502734 ZNF827Q17R98 1081 aa12.44□□□□□ -0.42
COPB2-202ENST00000502734 KCNQ4P56696 695 aa12.43□□□□□ -0.42
COPB2-202ENST00000502734 SLC16A10Q8TF71 515 aa12.43□□□□□ -0.42
COPB2-202ENST00000502734 PANK3Q9H999 370 aa12.43□□□□□ -0.42
COPB2-202ENST00000502734 POLKQ9UBT6 870 aa12.43□□□□□ -0.42
COPB2-202ENST00000502734 MEGF6O75095 1541 aa12.42□□□□□ -0.42
COPB2-202ENST00000502734 NHSQ6T4R5 1651 aa12.42□□□□□ -0.42
COPB2-202ENST00000502734 CACNB1Q02641 598 aaPredicted RBP12.42□□□□□ -0.42
COPB2-202ENST00000502734 SGIP1Q9BQI5 828 aa12.42□□□□□ -0.42
COPB2-202ENST00000502734 SYT17Q9BSW7 474 aa12.42□□□□□ -0.42
COPB2-202ENST00000502734 TFCP2L1Q9NZI6 479 aa12.42□□□□□ -0.42
COPB2-202ENST00000502734 PCDH11XQ9BZA7 1347 aa12.41□□□□□ -0.42
COPB2-202ENST00000502734 PCDH11YQ9BZA8 1340 aa12.41□□□□□ -0.42
COPB2-202ENST00000502734 CYP27B1O15528 508 aa12.41□□□□□ -0.42
COPB2-202ENST00000502734 HMGB2P26583 209 aaKnown RBP12.41□□□□□ -0.42
COPB2-202ENST00000502734 TNNT2P45379 298 aaPredicted RBP12.41□□□□□ -0.42
COPB2-202ENST00000502734 ARXQ96QS3 562 aa12.41□□□□□ -0.42
COPB2-202ENST00000502734 EYA1Q99502 592 aa12.41□□□□□ -0.42
COPB2-202ENST00000502734 FHDC1Q9C0D6 1143 aaPredicted RBP12.41□□□□□ -0.42
COPB2-202ENST00000502734 CCNL1Q9UK58 526 aaPredicted RBP12.41□□□□□ -0.42
COPB2-202ENST00000502734 SPG7Q9UQ90 795 aa12.41□□□□□ -0.42
COPB2-202ENST00000502734 FAM208AQ9UK61 1670 aaKnown RBP12.41□□□□□ -0.42
COPB2-202ENST00000502734 YY1P25490 414 aa12.4□□□□□ -0.42
COPB2-202ENST00000502734 MPRIPQ6WCQ1 1025 aa12.4□□□□□ -0.42
COPB2-202ENST00000502734 BTAF1O14981 1849 aa12.39□□□□□ -0.43
COPB2-202ENST00000502734 NKX1-1Q15270 411 aaPredicted RBP12.39□□□□□ -0.43
COPB2-202ENST00000502734 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.39□□□□□ -0.432e-14■■■■□ 21.7
COPB2-202ENST00000502734 NSD2O96028 1365 aa12.39□□□□□ -0.43
COPB2-202ENST00000502734 PNPLA7Q6ZV29 1317 aa12.38□□□□□ -0.43
COPB2-202ENST00000502734 RGPD2P0DJD1 1756 aa12.38□□□□□ -0.43
COPB2-202ENST00000502734 CASZ1Q86V15 1759 aa12.38□□□□□ -0.43
COPB2-202ENST00000502734 POLD1P28340 1107 aa12.38□□□□□ -0.43
COPB2-202ENST00000502734 C1QBPQ07021 282 aaKnown RBP12.38□□□□□ -0.43
COPB2-202ENST00000502734 SMARCC1Q92922 1105 aaPredicted RBP12.38□□□□□ -0.43
COPB2-202ENST00000502734 EIF4A2Q14240 407 aaKnown RBP12.37□□□□□ -0.43
COPB2-202ENST00000502734 MORC1Q86VD1 984 aa12.36□□□□□ -0.43
COPB2-202ENST00000502734 IFNL2Q8IZJ0 200 aa12.36□□□□□ -0.43
COPB2-202ENST00000502734 PIGBQ92521 554 aa12.36□□□□□ -0.43
COPB2-202ENST00000502734 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
COPB2-202ENST00000502734 KIF20BQ96Q89 1820 aa12.35□□□□□ -0.43
COPB2-202ENST00000502734 COL23A1Q86Y22 540 aaPredicted RBP12.35□□□□□ -0.43
COPB2-202ENST00000502734 FLAD1Q8NFF5 587 aa12.35□□□□□ -0.43
COPB2-202ENST00000502734 PHKG2P15735 406 aa12.34□□□□□ -0.43
COPB2-202ENST00000502734 MYOM1P52179 1685 aa12.34□□□□□ -0.43
COPB2-202ENST00000502734 PAPPAQ13219 1627 aa12.33□□□□□ -0.43
COPB2-202ENST00000502734 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
COPB2-202ENST00000502734 PLEKHO1Q53GL0 409 aaPredicted RBP12.33□□□□□ -0.44
COPB2-202ENST00000502734 TMOD3Q9NYL9 352 aa12.33□□□□□ -0.44
COPB2-202ENST00000502734 NCAPD2Q15021 1401 aa12.33□□□□□ -0.44
COPB2-202ENST00000502734 MAP2P11137 1827 aaKnown RBP12.32□□□□□ -0.44
COPB2-202ENST00000502734 MAP3K5Q99683 1374 aa12.32□□□□□ -0.44
COPB2-202ENST00000502734 KLHL34Q8N239 644 aa12.32□□□□□ -0.44
COPB2-202ENST00000502734 SHANK3Q9BYB0 1731 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
COPB2-202ENST00000502734 SIK1P57059 783 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 GPR162Q16538 588 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 AMOTQ4VCS5 1084 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 AK7Q96M32 723 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 ASAP1Q9ULH1 1129 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 IGSF1Q8N6C5 1336 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 UTRNP46939 3433 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 DOT1LQ8TEK3 1739 aa12.31□□□□□ -0.44
COPB2-202ENST00000502734 ERVV-2B6SEH9 535 aa12.3□□□□□ -0.44
COPB2-202ENST00000502734 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
COPB2-202ENST00000502734 AMER1Q5JTC6 1135 aaPredicted RBP12.29□□□□□ -0.44
COPB2-202ENST00000502734 MSL1Q68DK7 614 aa12.29□□□□□ -0.44
COPB2-202ENST00000502734 DCAF5Q96JK2 942 aa12.29□□□□□ -0.44
COPB2-202ENST00000502734 ATG3Q9NT62 314 aa12.29□□□□□ -0.44
COPB2-202ENST00000502734 KIF7Q2M1P5 1343 aa12.29□□□□□ -0.44
COPB2-202ENST00000502734 LY75O60449 1722 aa12.28□□□□□ -0.44
COPB2-202ENST00000502734 ZNF530Q6P9A1 599 aaPredicted RBP12.28□□□□□ -0.44
COPB2-202ENST00000502734 PLEKHG2Q9H7P9 1386 aa12.28□□□□□ -0.44
COPB2-202ENST00000502734 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.27□□□□□ -0.45
COPB2-202ENST00000502734 PER1O15534 1290 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms