RNA–Protein interactions for RNA: ENST00000501412.2

RAP1B-213, Transcript of RAP1B, member of RAS oncogene family, human

TSL 2

Gene RAP1B, Length 1,488 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAP1B-213	ENST00000501412	RIPK4	P57078	832 aa		29.28	■■■□□ 2.28
RAP1B-213	ENST00000501412	UNC5CL	Q8IV45	518 aa		29.28	■■■□□ 2.28
RAP1B-213	ENST00000501412	WWC1	Q8IX03	1113 aa		29.27	■■■□□ 2.28
RAP1B-213	ENST00000501412	PKD1L3	Q7Z443	1732 aa		29.26	■■■□□ 2.27
RAP1B-213	ENST00000501412	OVOS2	A0A0G2JMS6	1433 aa		29.26	■■■□□ 2.27
RAP1B-213	ENST00000501412	PARP4	Q9UKK3	1724 aa	Known RBP	29.26	■■■□□ 2.27
RAP1B-213	ENST00000501412	GAS2L2	Q8NHY3	880 aa		29.25	■■■□□ 2.27
RAP1B-213	ENST00000501412	RAPGEF4	Q8WZA2	1011 aa		29.25	■■■□□ 2.27
RAP1B-213	ENST00000501412	DISP2	A7MBM2	1401 aa		29.24	■■■□□ 2.27
RAP1B-213	ENST00000501412	SPATA31A1	Q5TZJ5	1347 aa		29.24	■■■□□ 2.27
RAP1B-213	ENST00000501412	WNK3	Q9BYP7	1800 aa		29.23	■■■□□ 2.27
RAP1B-213	ENST00000501412	SPATA31A5	Q5VU36	1347 aa		29.23	■■■□□ 2.27
RAP1B-213	ENST00000501412	SPATA31A7	Q8IWB4	1347 aa		29.23	■■■□□ 2.27
RAP1B-213	ENST00000501412	TAT	P17735	454 aa	Predicted RBP	29.23	■■■□□ 2.27
RAP1B-213	ENST00000501412	AMOT	Q4VCS5	1084 aa		29.23	■■■□□ 2.27
RAP1B-213	ENST00000501412	PLEKHO1	Q53GL0	409 aa	Predicted RBP	29.22	■■■□□ 2.27
RAP1B-213	ENST00000501412	ZNF772	Q68DY9	489 aa	Predicted RBP	29.22	■■■□□ 2.27
RAP1B-213	ENST00000501412	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	29.22	■■■□□ 2.27
RAP1B-213	ENST00000501412	VPS72	Q15906	364 aa		29.21	■■■□□ 2.27
RAP1B-213	ENST00000501412	IL2RB	P14784	551 aa		29.2	■■■□□ 2.26
RAP1B-213	ENST00000501412	USP35	Q9P2H5	1018 aa		29.2	■■■□□ 2.26
RAP1B-213	ENST00000501412	USP21	Q9UK80	565 aa		29.2	■■■□□ 2.26
RAP1B-213	ENST00000501412	AFF2	P51816	1311 aa		29.2	■■■□□ 2.26
RAP1B-213	ENST00000501412	PDE3B	Q13370	1112 aa		29.19	■■■□□ 2.26
RAP1B-213	ENST00000501412	THRAP3	Q9Y2W1	955 aa	Known RBP	29.18	■■■□□ 2.26
RAP1B-213	ENST00000501412	SHANK3	Q9BYB0	1731 aa		29.18	■■■□□ 2.26
RAP1B-213	ENST00000501412	WDR63	Q8IWG1	891 aa		29.17	■■■□□ 2.26
RAP1B-213	ENST00000501412	MAP3K5	Q99683	1374 aa		29.17	■■■□□ 2.26
RAP1B-213	ENST00000501412	LMOD3	Q0VAK6	560 aa		29.17	■■■□□ 2.26
RAP1B-213	ENST00000501412	CDCA7L	Q96GN5	454 aa		29.17	■■■□□ 2.26
RAP1B-213	ENST00000501412	ZNF530	Q6P9A1	599 aa	Predicted RBP	29.16	■■■□□ 2.26
RAP1B-213	ENST00000501412	HTATSF1	O43719	755 aa	Known RBP	29.15	■■■□□ 2.26
RAP1B-213	ENST00000501412	GOLGA2	Q08379	1002 aa		29.15	■■■□□ 2.26
RAP1B-213	ENST00000501412	SPINK5	Q9NQ38	1064 aa	Predicted RBP	29.15	■■■□□ 2.26
RAP1B-213	ENST00000501412	SPG7	Q9UQ90	795 aa		29.15	■■■□□ 2.26
RAP1B-213	ENST00000501412	ATRN	O75882	1429 aa		29.14	■■■□□ 2.26
RAP1B-213	ENST00000501412	GNAT3	A8MTJ3	354 aa		29.14	■■■□□ 2.26
RAP1B-213	ENST00000501412	LRRC37A3	O60309	1634 aa		29.14	■■■□□ 2.25
RAP1B-213	ENST00000501412	ADAMTS7	Q9UKP4	1686 aa		29.14	■■■□□ 2.25
RAP1B-213	ENST00000501412	AKAP4	Q5JQC9	854 aa		29.13	■■■□□ 2.25
RAP1B-213	ENST00000501412	BARGIN	Q6ZT62	677 aa		29.13	■■■□□ 2.25
RAP1B-213	ENST00000501412	THUMPD2	Q9BTF0	503 aa	Known RBP	29.13	■■■□□ 2.25
RAP1B-213	ENST00000501412	DCTN1	Q14203	1278 aa		29.12	■■■□□ 2.25
RAP1B-213	ENST00000501412	TRMT2A	Q8IZ69	625 aa	Known RBP	29.12	■■■□□ 2.25
RAP1B-213	ENST00000501412	SLFN5	Q08AF3	891 aa		29.11	■■■□□ 2.25
RAP1B-213	ENST00000501412	IL16	Q14005	1332 aa		29.11	■■■□□ 2.25
RAP1B-213	ENST00000501412	CYP27B1	O15528	508 aa		29.1	■■■□□ 2.25
RAP1B-213	ENST00000501412	MCM10	Q7L590	875 aa		29.1	■■■□□ 2.25
RAP1B-213	ENST00000501412	ZCRB1	Q8TBF4	217 aa	Known RBP	29.1	■■■□□ 2.25
RAP1B-213	ENST00000501412	GLI3	P10071	1580 aa		29.1	■■■□□ 2.25
RAP1B-213	ENST00000501412	PHKG2	P15735	406 aa		29.1	■■■□□ 2.25
RAP1B-213	ENST00000501412	IL17RE	Q8NFR9	667 aa		29.1	■■■□□ 2.25
RAP1B-213	ENST00000501412	CDCA7	Q9BWT1	371 aa	Predicted RBP	29.1	■■■□□ 2.25
RAP1B-213	ENST00000501412	CEMIP	Q8WUJ3	1361 aa		29.09	■■■□□ 2.25
RAP1B-213	ENST00000501412	CENPB	P07199	599 aa	Predicted RBP	29.09	■■■□□ 2.25
RAP1B-213	ENST00000501412	CCDC9	Q9Y3X0	531 aa	Known RBP	29.09	■■■□□ 2.25
RAP1B-213	ENST00000501412	VIRMA	Q69YN4	1812 aa	Known RBP	29.08	■■■□□ 2.25
RAP1B-213	ENST00000501412	PCDH11X	Q9BZA7	1347 aa		29.07	■■■□□ 2.24
RAP1B-213	ENST00000501412	PCDH11Y	Q9BZA8	1340 aa		29.07	■■■□□ 2.24
RAP1B-213	ENST00000501412		E9PSI1	815 aa		29.07	■■■□□ 2.24
RAP1B-213	ENST00000501412	C1orf141	Q5JVX7	400 aa		29.07	■■■□□ 2.24
RAP1B-213	ENST00000501412	DUSP27	Q5VZP5	1158 aa		29.07	■■■□□ 2.24
RAP1B-213	ENST00000501412	RTF1	Q92541	710 aa	Known RBP	29.07	■■■□□ 2.24
RAP1B-213	ENST00000501412	TNS2	Q63HR2	1409 aa		29.07	■■■□□ 2.24
RAP1B-213	ENST00000501412	IFNL2	Q8IZJ0	200 aa		29.06	■■■□□ 2.24
RAP1B-213	ENST00000501412	ZNF853	P0CG23	659 aa		29.05	■■■□□ 2.24
RAP1B-213	ENST00000501412	TRPC5	Q9UL62	973 aa	Predicted RBP	29.05	■■■□□ 2.24
RAP1B-213	ENST00000501412	KDM6A	O15550	1401 aa	Predicted RBP	29.05	■■■□□ 2.24
RAP1B-213	ENST00000501412	SCN11A	Q9UI33	1791 aa		29.05	■■■□□ 2.24
RAP1B-213	ENST00000501412	RXRB	P28702	533 aa		29.04	■■■□□ 2.24
RAP1B-213	ENST00000501412	CALD1	Q05682	793 aa	Known RBP	29.04	■■■□□ 2.24
RAP1B-213	ENST00000501412	GJD4	Q96KN9	370 aa	Predicted RBP	29.04	■■■□□ 2.24
RAP1B-213	ENST00000501412	LGR6	Q9HBX8	967 aa		29.04	■■■□□ 2.24
RAP1B-213	ENST00000501412	THSD7A	Q9UPZ6	1657 aa		29.04	■■■□□ 2.24
RAP1B-213	ENST00000501412	RNMT	O43148	476 aa	Known RBP	29.03	■■■□□ 2.24
RAP1B-213	ENST00000501412	MPRIP	Q6WCQ1	1025 aa		29.03	■■■□□ 2.24
RAP1B-213	ENST00000501412	NKX1-1	Q15270	411 aa	Predicted RBP	29.02	■■■□□ 2.24
RAP1B-213	ENST00000501412	IFT57	Q9NWB7	429 aa		29.02	■■■□□ 2.24
RAP1B-213	ENST00000501412	FAM98C	Q17RN3	349 aa	Known RBP	29.01	■■■□□ 2.23
RAP1B-213	ENST00000501412	QTRT2	Q9H974	415 aa	Known RBP	29.01	■■■□□ 2.23
RAP1B-213	ENST00000501412	CFAP44	Q96MT7	982 aa		29	■■■□□ 2.23
RAP1B-213	ENST00000501412	EXOC5	O00471	708 aa		28.99	■■■□□ 2.23
RAP1B-213	ENST00000501412	SIPA1L3	O60292	1781 aa	Predicted RBP	28.99	■■■□□ 2.23
RAP1B-213	ENST00000501412	MRC1	P22897	1456 aa		28.98	■■■□□ 2.23
RAP1B-213	ENST00000501412	ONECUT3	O60422	494 aa	Predicted RBP	28.98	■■■□□ 2.23
RAP1B-213	ENST00000501412	HSP90AB1	P08238	724 aa	Known RBP	28.98	■■■□□ 2.23
RAP1B-213	ENST00000501412	DCAF5	Q96JK2	942 aa		28.98	■■■□□ 2.23
RAP1B-213	ENST00000501412	FANCI	Q9NVI1	1328 aa		28.98	■■■□□ 2.23
RAP1B-213	ENST00000501412	CHL1	O00533	1208 aa		28.97	■■■□□ 2.23
RAP1B-213	ENST00000501412	GNAI1	P63096	354 aa		28.97	■■■□□ 2.23
RAP1B-213	ENST00000501412	DDX54	Q8TDD1	881 aa	Known RBP	28.97	■■■□□ 2.23
RAP1B-213	ENST00000501412	MYH16	Q9H6N6	1097 aa		28.97	■■■□□ 2.23
RAP1B-213	ENST00000501412	DDB1	Q16531	1140 aa		28.97	■■■□□ 2.23
RAP1B-213	ENST00000501412	TSR2	Q969E8	191 aa	Known RBP	28.96	■■■□□ 2.23
RAP1B-213	ENST00000501412	RBM6	P78332	1123 aa	Known RBP	28.95	■■■□□ 2.22
RAP1B-213	ENST00000501412	MBIP	Q9NS73	344 aa		28.95	■■■□□ 2.22
RAP1B-213	ENST00000501412	TOGARAM1	Q9Y4F4	1720 aa		28.95	■■■□□ 2.22
RAP1B-213	ENST00000501412	TAF7	Q15545	349 aa	Predicted RBP	28.92	■■■□□ 2.22
RAP1B-213	ENST00000501412	LAS1L	Q9Y4W2	734 aa	Known RBP	28.92	■■■□□ 2.22
RAP1B-213	ENST00000501412	BABAM1	Q9NWV8	329 aa		28.91	■■■□□ 2.22

Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms