RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 C8orf58Q8NAV2 365 aa23.43■■□□□ 1.34
LINC00535-201ENST00000501400 NBPF4Q96M43 638 aa23.43■■□□□ 1.34
LINC00535-201ENST00000501400 KIF16BQ96L93 1317 aa23.42■■□□□ 1.34
LINC00535-201ENST00000501400 CHL1O00533 1208 aa23.42■■□□□ 1.34
LINC00535-201ENST00000501400 BRPF1P55201 1214 aaPredicted RBP23.42■■□□□ 1.34
LINC00535-201ENST00000501400 RBM19Q9Y4C8 960 aaKnown RBP23.42■■□□□ 1.34
LINC00535-201ENST00000501400 NOB1Q9ULX3 412 aaKnown RBP23.41■■□□□ 1.34
LINC00535-201ENST00000501400 ATF7IPQ6VMQ6 1270 aa23.41■■□□□ 1.34
LINC00535-201ENST00000501400 CENPQQ7L2Z9 268 aaPredicted RBP23.41■■□□□ 1.34
LINC00535-201ENST00000501400 DZIP1LQ8IYY4 767 aaKnown RBP23.41■■□□□ 1.34
LINC00535-201ENST00000501400 TWISTNBQ3B726 338 aaPredicted RBP23.4■■□□□ 1.34
LINC00535-201ENST00000501400 LMO7Q8WWI1 1683 aa23.4■■□□□ 1.34
LINC00535-201ENST00000501400 COL18A1P39060 1754 aa23.4■■□□□ 1.34
LINC00535-201ENST00000501400 MVPQ14764 893 aaKnown RBP23.39■■□□□ 1.34
LINC00535-201ENST00000501400 BRINP3Q76B58 766 aa23.39■■□□□ 1.34
LINC00535-201ENST00000501400 LRRC59Q96AG4 307 aaKnown RBP23.39■■□□□ 1.33
LINC00535-201ENST00000501400 MAP3K5Q99683 1374 aa23.38■■□□□ 1.33
LINC00535-201ENST00000501400 ELL2O00472 640 aaPredicted RBP23.38■■□□□ 1.33
LINC00535-201ENST00000501400 FTSJ3Q8IY81 847 aaKnown RBP23.37■■□□□ 1.33
LINC00535-201ENST00000501400 MRPL50Q8N5N7 158 aaKnown RBP23.37■■□□□ 1.33
LINC00535-201ENST00000501400 AXIN2Q9Y2T1 843 aa23.37■■□□□ 1.33
LINC00535-201ENST00000501400 HTATSF1O43719 755 aaKnown RBP23.37■■□□□ 1.33
LINC00535-201ENST00000501400 SKAP1Q86WV1 359 aa23.37■■□□□ 1.33
LINC00535-201ENST00000501400 RTF1Q92541 710 aaKnown RBP23.37■■□□□ 1.33
LINC00535-201ENST00000501400 SPATA31A3Q5VYP0 1347 aa23.37■■□□□ 1.33
LINC00535-201ENST00000501400 KIAA0232Q92628 1395 aa23.36■■□□□ 1.33
LINC00535-201ENST00000501400 KRT24Q2M2I5 525 aa23.36■■□□□ 1.33
LINC00535-201ENST00000501400 MS4A1P11836 297 aa23.35■■□□□ 1.33
LINC00535-201ENST00000501400 AAMPQ13685 434 aa23.35■■□□□ 1.33
LINC00535-201ENST00000501400 ANKRD24Q8TF21 1146 aa23.35■■□□□ 1.33
LINC00535-201ENST00000501400 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
LINC00535-201ENST00000501400 IGHDP01880 384 aa23.33■■□□□ 1.33
LINC00535-201ENST00000501400 ZC3H6P61129 1189 aaKnown RBP23.33■■□□□ 1.33
LINC00535-201ENST00000501400 ABCC6O95255 1503 aa23.33■■□□□ 1.33
LINC00535-201ENST00000501400 ERBB3P21860 1342 aa23.33■■□□□ 1.32
LINC00535-201ENST00000501400 FAM208AQ9UK61 1670 aaKnown RBP23.32■■□□□ 1.32
LINC00535-201ENST00000501400 IPO8O15397 1037 aaKnown RBP23.32■■□□□ 1.32
LINC00535-201ENST00000501400 PCDHB15Q9Y5E8 787 aa23.32■■□□□ 1.32
LINC00535-201ENST00000501400 TCERG1O14776 1098 aaKnown RBP23.31■■□□□ 1.32
LINC00535-201ENST00000501400 TMEM57Q8N5G2 664 aa23.31■■□□□ 1.32
LINC00535-201ENST00000501400 IL17REQ8NFR9 667 aa23.31■■□□□ 1.32
LINC00535-201ENST00000501400 MIS18AQ9NYP9 233 aa23.31■■□□□ 1.32
LINC00535-201ENST00000501400 VIRMAQ69YN4 1812 aaKnown RBP23.31■■□□□ 1.32
LINC00535-201ENST00000501400 CABLES1Q8TDN4 633 aa23.31■■□□□ 1.32
LINC00535-201ENST00000501400 NHSL1Q5SYE7 1610 aa23.3■■□□□ 1.32
LINC00535-201ENST00000501400 SLAIN2Q9P270 581 aa23.3■■□□□ 1.32
LINC00535-201ENST00000501400 ABCA3Q99758 1704 aa23.3■■□□□ 1.32
LINC00535-201ENST00000501400 CEMIPQ8WUJ3 1361 aa23.3■■□□□ 1.32
LINC00535-201ENST00000501400 TSPYL4Q9UJ04 414 aa23.29■■□□□ 1.32
LINC00535-201ENST00000501400 ITPRIPQ8IWB1 547 aa23.29■■□□□ 1.32
LINC00535-201ENST00000501400 ARHGAP45Q92619 1136 aa23.29■■□□□ 1.32
LINC00535-201ENST00000501400 SOS2Q07890 1332 aaPredicted RBP23.28■■□□□ 1.32
LINC00535-201ENST00000501400 DDX19BQ9UMR2 479 aa23.28■■□□□ 1.32
LINC00535-201ENST00000501400 CPDO75976 1380 aa23.26■■□□□ 1.31
LINC00535-201ENST00000501400 ABCC4O15439 1325 aa23.26■■□□□ 1.31
LINC00535-201ENST00000501400 KDM3BQ7LBC6 1761 aa23.26■■□□□ 1.31
LINC00535-201ENST00000501400 RGS12O14924 1447 aa23.25■■□□□ 1.31
LINC00535-201ENST00000501400 ADAMTS7Q9UKP4 1686 aa23.24■■□□□ 1.31
LINC00535-201ENST00000501400 HAP1P54257 671 aaPredicted RBP23.23■■□□□ 1.31
LINC00535-201ENST00000501400 ZNF530Q6P9A1 599 aaPredicted RBP23.22■■□□□ 1.31
LINC00535-201ENST00000501400 ZBTB40Q9NUA8 1239 aa23.22■■□□□ 1.31
LINC00535-201ENST00000501400 PLEKHO1Q53GL0 409 aaPredicted RBP23.21■■□□□ 1.31
LINC00535-201ENST00000501400 TAF7Q15545 349 aaPredicted RBP23.21■■□□□ 1.31
LINC00535-201ENST00000501400 CHRNA2Q15822 529 aa23.21■■□□□ 1.31
LINC00535-201ENST00000501400 AMOTQ4VCS5 1084 aa23.21■■□□□ 1.31
LINC00535-201ENST00000501400 AKAP4Q5JQC9 854 aa23.21■■□□□ 1.31
LINC00535-201ENST00000501400 BABAM1Q9NWV8 329 aa23.21■■□□□ 1.31
LINC00535-201ENST00000501400 SIPA1L3O60292 1781 aaPredicted RBP23.2■■□□□ 1.3
LINC00535-201ENST00000501400 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
LINC00535-201ENST00000501400 OVOS2A0A0G2JMS6 1433 aa23.2■■□□□ 1.3
LINC00535-201ENST00000501400 MEGF6O75095 1541 aa23.2■■□□□ 1.3
LINC00535-201ENST00000501400 API5Q9BZZ5 524 aaKnown RBP23.19■■□□□ 1.3
LINC00535-201ENST00000501400 PKD1L3Q7Z443 1732 aa23.17■■□□□ 1.3
LINC00535-201ENST00000501400 ZBTB7BO15156 539 aaPredicted RBP23.16■■□□□ 1.3
LINC00535-201ENST00000501400 NLRP2Q9NX02 1062 aa23.16■■□□□ 1.3
LINC00535-201ENST00000501400 CACNA1FO60840 1977 aa23.15■■□□□ 1.3
LINC00535-201ENST00000501400 MPRIPQ6WCQ1 1025 aa23.15■■□□□ 1.3
LINC00535-201ENST00000501400 RWDD1Q9H446 243 aaPredicted RBP23.15■■□□□ 1.3
LINC00535-201ENST00000501400 LTBP4Q8N2S1 1624 aa23.15■■□□□ 1.3
LINC00535-201ENST00000501400 PDE4AP27815 886 aa23.14■■□□□ 1.3
LINC00535-201ENST00000501400 HDAC1Q13547 482 aaPredicted RBP23.14■■□□□ 1.3
LINC00535-201ENST00000501400 PTPRCP08575 1304 aa23.14■■□□□ 1.3
LINC00535-201ENST00000501400 SCN11AQ9UI33 1791 aa23.14■■□□□ 1.29
LINC00535-201ENST00000501400 RNMTO43148 476 aaKnown RBP23.14■■□□□ 1.29
LINC00535-201ENST00000501400 RGS3P49796 1198 aa23.14■■□□□ 1.29
LINC00535-201ENST00000501400 C1orf141Q5JVX7 400 aa23.14■■□□□ 1.29
LINC00535-201ENST00000501400 BACH2Q9BYV9 841 aa23.14■■□□□ 1.29
LINC00535-201ENST00000501400 SOS1Q07889 1333 aaPredicted RBP23.13■■□□□ 1.29
LINC00535-201ENST00000501400 SLC4A2P04920 1241 aa23.13■■□□□ 1.29
LINC00535-201ENST00000501400 ROBO1Q9Y6N7 1651 aa23.13■■□□□ 1.29
LINC00535-201ENST00000501400 PLEKHG2Q9H7P9 1386 aa23.12■■□□□ 1.29
LINC00535-201ENST00000501400 G2E3Q7L622 706 aa23.12■■□□□ 1.29
LINC00535-201ENST00000501400 COL5A2P05997 1499 aaPredicted RBP23.11■■□□□ 1.29
LINC00535-201ENST00000501400 CSB-PGBD3P0DP91 1061 aa23.11■■□□□ 1.29
LINC00535-201ENST00000501400 INTS3Q68E01 1043 aaKnown RBP23.11■■□□□ 1.29
LINC00535-201ENST00000501400 RAPGEF4Q8WZA2 1011 aa23.11■■□□□ 1.29
LINC00535-201ENST00000501400 KDM6AO15550 1401 aaPredicted RBP23.1■■□□□ 1.29
LINC00535-201ENST00000501400 N4BP2Q86UW6 1770 aaPredicted RBP23.1■■□□□ 1.29
LINC00535-201ENST00000501400 TEFQ10587 303 aa23.1■■□□□ 1.29
LINC00535-201ENST00000501400 PRDM11Q9NQV5 511 aa23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms