RNA–Protein interactions for RNA: ENST00000499045.2

CHFR-206, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 505 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-206ENST00000499045 CAMKK2Q96RR4 588 aa34.36■■■■□ 3.09
CHFR-206ENST00000499045 DDX54Q8TDD1 881 aaKnown RBP34.34■■■■□ 3.09
CHFR-206ENST00000499045 IGSF1Q8N6C5 1336 aa34.32■■■■□ 3.09
CHFR-206ENST00000499045 NHSQ6T4R5 1651 aa34.32■■■■□ 3.08
CHFR-206ENST00000499045 MTHFSP49914 203 aa34.32■■■■□ 3.08
CHFR-206ENST00000499045 EZH2Q15910 746 aaKnown RBP34.32■■■■□ 3.08
CHFR-206ENST00000499045 PARD3Q8TEW0 1356 aa34.32■■■■□ 3.08
CHFR-206ENST00000499045 PKD1L3Q7Z443 1732 aa34.3■■■■□ 3.08
CHFR-206ENST00000499045 KCNQ2O43526 872 aa34.29■■■■□ 3.08
CHFR-206ENST00000499045 CNGB1Q14028 1251 aaPredicted RBP34.28■■■■□ 3.08
CHFR-206ENST00000499045 RGPD3A6NKT7 1758 aaPredicted RBP34.28■■■■□ 3.08
CHFR-206ENST00000499045 RGPD4Q7Z3J3 1758 aa34.28■■■■□ 3.08
CHFR-206ENST00000499045 PLSCR1O15162 318 aa34.27■■■■□ 3.08
CHFR-206ENST00000499045 IL13P35225 146 aa34.27■■■■□ 3.08
CHFR-206ENST00000499045 ACSBG1Q96GR2 724 aa34.27■■■■□ 3.08
CHFR-206ENST00000499045 RREB1Q92766 1687 aa34.26■■■■□ 3.08
CHFR-206ENST00000499045 PLEKHG2Q9H7P9 1386 aa34.24■■■■□ 3.07
CHFR-206ENST00000499045 PCDH11XQ9BZA7 1347 aa34.24■■■■□ 3.07
CHFR-206ENST00000499045 PCDH11YQ9BZA8 1340 aa34.24■■■■□ 3.07
CHFR-206ENST00000499045 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.23■■■■□ 3.07
CHFR-206ENST00000499045 KAT6BQ8WYB5 2073 aa34.23■■■■□ 3.07
CHFR-206ENST00000499045 CYP27B1O15528 508 aa34.21■■■■□ 3.07
CHFR-206ENST00000499045 DOT1LQ8TEK3 1739 aa34.2■■■■□ 3.07
CHFR-206ENST00000499045 NUP188Q5SRE5 1749 aa34.19■■■■□ 3.06
CHFR-206ENST00000499045 BTAF1O14981 1849 aa34.19■■■■□ 3.06
CHFR-206ENST00000499045 COL3A1P02461 1466 aaPredicted RBP34.19■■■■□ 3.06
CHFR-206ENST00000499045 SPG7Q9UQ90 795 aa34.18■■■■□ 3.06
CHFR-206ENST00000499045 KDRP35968 1356 aa34.18■■■■□ 3.06
CHFR-206ENST00000499045 AEBP1Q8IUX7 1158 aa34.17■■■■□ 3.06
CHFR-206ENST00000499045 PRIM1P49642 420 aaKnown RBP34.15■■■■□ 3.06
CHFR-206ENST00000499045 PROM2Q8N271 834 aa34.15■■■■□ 3.06
CHFR-206ENST00000499045 DIAPH1O60610 1272 aaKnown RBP34.14■■■■□ 3.06
CHFR-206ENST00000499045 SULT6B1Q6IMI4 303 aa34.14■■■■□ 3.06
CHFR-206ENST00000499045 NKX1-1Q15270 411 aaPredicted RBP34.13■■■■□ 3.05
CHFR-206ENST00000499045 PPP2R1AP30153 589 aa34.12■■■■□ 3.05
CHFR-206ENST00000499045 DDX10Q13206 875 aaKnown RBP34.11■■■■□ 3.05
CHFR-206ENST00000499045 TOGARAM1Q9Y4F4 1720 aa34.09■■■■□ 3.05
CHFR-206ENST00000499045 PHKG2P15735 406 aa34.08■■■■□ 3.05
CHFR-206ENST00000499045 TXNRD1Q16881 649 aa34.08■■■■□ 3.05
CHFR-206ENST00000499045 IFNL2Q8IZJ0 200 aa34.08■■■■□ 3.05
CHFR-206ENST00000499045 SYTL4Q96C24 671 aaPredicted RBP34.08■■■■□ 3.05
CHFR-206ENST00000499045 AMOTQ4VCS5 1084 aa34.06■■■■□ 3.04
CHFR-206ENST00000499045 PLEKHO1Q53GL0 409 aaPredicted RBP34.06■■■■□ 3.04
CHFR-206ENST00000499045 PSDA5PKW4 1024 aaPredicted RBP34.04■■■■□ 3.04
CHFR-206ENST00000499045 ITGB4P16144 1822 aa34.03■■■■□ 3.04
CHFR-206ENST00000499045 R3HDM1Q15032 1099 aaKnown RBP34.03■■■■□ 3.04
CHFR-206ENST00000499045 HMOX1P09601 288 aa34.02■■■■□ 3.04
CHFR-206ENST00000499045 NBPF14Q5TI25 921 aa34.02■■■■□ 3.04
CHFR-206ENST00000499045 CFAP53Q96M91 514 aa34.02■■■■□ 3.04
CHFR-206ENST00000499045 LY75O60449 1722 aa33.99■■■■□ 3.03
CHFR-206ENST00000499045 ZNF530Q6P9A1 599 aaPredicted RBP33.98■■■■□ 3.03
CHFR-206ENST00000499045 ANO8Q9HCE9 1232 aaPredicted RBP33.98■■■■□ 3.03
CHFR-206ENST00000499045 MPRIPQ6WCQ1 1025 aa33.97■■■■□ 3.03
CHFR-206ENST00000499045 U2SURPO15042 1029 aaKnown RBP33.96■■■■□ 3.03
CHFR-206ENST00000499045 LRRC4BQ9NT99 713 aa33.96■■■■□ 3.03
CHFR-206ENST00000499045 PAPPAQ13219 1627 aa33.95■■■■□ 3.03
CHFR-206ENST00000499045 HSP90AB1P08238 724 aaKnown RBP33.95■■■■□ 3.03
CHFR-206ENST00000499045 SLC27A3Q5K4L6 730 aa33.94■■■■□ 3.02
CHFR-206ENST00000499045 PIGBQ92521 554 aa33.94■■■■□ 3.02
CHFR-206ENST00000499045 DCAF5Q96JK2 942 aa33.94■■■■□ 3.02
CHFR-206ENST00000499045 RALBP1Q15311 655 aa33.93■■■■□ 3.02
CHFR-206ENST00000499045 KDM6AO15550 1401 aaPredicted RBP33.93■■■■□ 3.02
CHFR-206ENST00000499045 C1orf141Q5JVX7 400 aa33.9■■■■□ 3.02
CHFR-206ENST00000499045 NUDCQ9Y266 331 aa33.9■■■■□ 3.02
CHFR-206ENST00000499045 ERVV-2B6SEH9 535 aa33.89■■■■□ 3.02
CHFR-206ENST00000499045 TMOD3Q9NYL9 352 aa33.88■■■■□ 3.01
CHFR-206ENST00000499045 PALLDQ8WX93 1383 aa33.87■■■■□ 3.01
CHFR-206ENST00000499045 MTHFSDQ2M296 383 aaKnown RBP33.87■■■■□ 3.01
CHFR-206ENST00000499045 AKAP4Q5JQC9 854 aa33.87■■■■□ 3.01
CHFR-206ENST00000499045 SLC15A2Q16348 729 aa33.86■■■■□ 3.01
CHFR-206ENST00000499045 STK32BQ9NY57 414 aa33.86■■■■□ 3.01
CHFR-206ENST00000499045 SMARCC1Q92922 1105 aaPredicted RBP33.85■■■■□ 3.01
CHFR-206ENST00000499045 RSPH6AQ9H0K4 717 aa33.85■■■■□ 3.01
CHFR-206ENST00000499045 ZNF316A6NFI3 1004 aaPredicted RBP33.84■■■■□ 3.01
CHFR-206ENST00000499045 KCNQ4P56696 695 aa33.84■■■■□ 3.01
CHFR-206ENST00000499045 CCNL1Q9UK58 526 aaPredicted RBP33.84■■■■□ 3.01
CHFR-206ENST00000499045 SCN11AQ9UI33 1791 aa33.84■■■■□ 3.01
CHFR-206ENST00000499045 SRCAPQ6ZRS2 3230 aa33.83■■■■□ 3.01
CHFR-206ENST00000499045 U2AF1L5P0DN76 240 aaPredicted RBP33.82■■■■□ 3
CHFR-206ENST00000499045 U2AF1Q01081 240 aaKnown RBP eCLIP33.82■■■■□ 3
CHFR-206ENST00000499045 LRP5O75197 1615 aa33.82■■■■□ 3
CHFR-206ENST00000499045 ZNF827Q17R98 1081 aa33.81■■■■□ 3
CHFR-206ENST00000499045 AKT1S1Q96B36 256 aa33.81■■■■□ 3
CHFR-206ENST00000499045 ASAP1Q9ULH1 1129 aa33.81■■■■□ 3
CHFR-206ENST00000499045 ADAMTS7Q9UKP4 1686 aa33.8■■■■□ 3
CHFR-206ENST00000499045 CASZ1Q86V15 1759 aa33.8■■■■□ 3
CHFR-206ENST00000499045 PRKAR2BP31323 418 aa33.8■■■■□ 3
CHFR-206ENST00000499045 FCHSD2O94868 740 aa33.79■■■■□ 3
CHFR-206ENST00000499045 CABP4P57796 275 aa33.79■■■■□ 3
CHFR-206ENST00000499045 ATG3Q9NT62 314 aa33.79■■■■□ 3
CHFR-206ENST00000499045 MYBBP1AQ9BQG0 1328 aaKnown RBP33.79■■■■□ 3
CHFR-206ENST00000499045 PHACTR3Q96KR7 559 aa33.78■■■■□ 3
CHFR-206ENST00000499045 VIRMAQ69YN4 1812 aaKnown RBP33.76■■■■□ 3
CHFR-206ENST00000499045 GAS2L2Q8NHY3 880 aa33.76■■■□□ 2.99
CHFR-206ENST00000499045 PDGFDQ9GZP0 370 aaPredicted RBP33.76■■■□□ 2.99
CHFR-206ENST00000499045 LGR6Q9HBX8 967 aa33.76■■■□□ 2.99
CHFR-206ENST00000499045 C5P01031 1676 aa33.76■■■□□ 2.99
CHFR-206ENST00000499045 TAF1LQ8IZX4 1826 aa33.76■■■□□ 2.99
CHFR-206ENST00000499045 RNMTO43148 476 aaKnown RBP33.75■■■□□ 2.99
CHFR-206ENST00000499045 PRKRIP1Q9H875 184 aaPredicted RBP33.75■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms