RNA–Protein interactions for RNA: ENST00000498819.1

SECISBP2-208, Transcript of SECIS binding protein 2, human

TSL 5

Gene SECISBP2, Length 854 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SECISBP2-208	ENST00000498819	LY75	O60449	1722 aa		14.06	□□□□□ -0.16
SECISBP2-208	ENST00000498819	NSD2	O96028	1365 aa		14.06	□□□□□ -0.16
SECISBP2-208	ENST00000498819	CAPN15	O75808	1086 aa		14.05	□□□□□ -0.16
SECISBP2-208	ENST00000498819	PRELP	P51888	382 aa		14.05	□□□□□ -0.16
SECISBP2-208	ENST00000498819	USP31	Q70CQ4	1352 aa		14.05	□□□□□ -0.16
SECISBP2-208	ENST00000498819	IGSF1	Q8N6C5	1336 aa		14.04	□□□□□ -0.16
SECISBP2-208	ENST00000498819	KTN1	Q86UP2	1357 aa	Known RBP	14.04	□□□□□ -0.16
SECISBP2-208	ENST00000498819	TNS4	Q8IZW8	715 aa		14.03	□□□□□ -0.16
SECISBP2-208	ENST00000498819	JMY	Q8N9B5	988 aa		14.03	□□□□□ -0.16
SECISBP2-208	ENST00000498819	KLRG1	Q96E93	195 aa		14.03	□□□□□ -0.16
SECISBP2-208	ENST00000498819	USP47	Q96K76	1375 aa		14.03	□□□□□ -0.16
SECISBP2-208	ENST00000498819	KAT6B	Q8WYB5	2073 aa		14.01	□□□□□ -0.17
SECISBP2-208	ENST00000498819	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	14	□□□□□ -0.17	7e-7	■■■■□ 20.2
SECISBP2-208	ENST00000498819	WWC3	Q9ULE0	1092 aa		14	□□□□□ -0.17
SECISBP2-208	ENST00000498819	ZCRB1	Q8TBF4	217 aa	Known RBP	13.99	□□□□□ -0.17
SECISBP2-208	ENST00000498819	DOT1L	Q8TEK3	1739 aa		13.98	□□□□□ -0.17
SECISBP2-208	ENST00000498819	USP54	Q70EL1	1684 aa		13.98	□□□□□ -0.17
SECISBP2-208	ENST00000498819	CIC	Q96RK0	1608 aa	Predicted RBP	13.98	□□□□□ -0.17
SECISBP2-208	ENST00000498819	NME9	Q86XW9	330 aa		13.98	□□□□□ -0.17
SECISBP2-208	ENST00000498819	RBM46	Q8TBY0	533 aa	Known RBP	13.98	□□□□□ -0.17
SECISBP2-208	ENST00000498819	IP6K1	Q92551	441 aa		13.98	□□□□□ -0.17
SECISBP2-208	ENST00000498819	LTN1	O94822	1766 aa		13.98	□□□□□ -0.17
SECISBP2-208	ENST00000498819	WDR90	Q96KV7	1748 aa		13.98	□□□□□ -0.17
SECISBP2-208	ENST00000498819	FSTL1	Q12841	308 aa		13.96	□□□□□ -0.17
SECISBP2-208	ENST00000498819	NMRK2	Q9NPI5	230 aa		13.96	□□□□□ -0.17
SECISBP2-208	ENST00000498819	SBNO2	Q9Y2G9	1366 aa		13.96	□□□□□ -0.18
SECISBP2-208	ENST00000498819	C5	P01031	1676 aa		13.95	□□□□□ -0.18
SECISBP2-208	ENST00000498819	HTRA3	P83110	453 aa		13.95	□□□□□ -0.18
SECISBP2-208	ENST00000498819	LTV1	Q96GA3	475 aa	Predicted RBP	13.95	□□□□□ -0.18
SECISBP2-208	ENST00000498819	MON2	Q7Z3U7	1717 aa		13.95	□□□□□ -0.18
SECISBP2-208	ENST00000498819	FAM208A	Q9UK61	1670 aa	Known RBP	13.95	□□□□□ -0.18
SECISBP2-208	ENST00000498819	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.94	□□□□□ -0.18
SECISBP2-208	ENST00000498819	AK7	Q96M32	723 aa		13.94	□□□□□ -0.18
SECISBP2-208	ENST00000498819	PALLD	Q8WX93	1383 aa		13.94	□□□□□ -0.18
SECISBP2-208	ENST00000498819	NSD3	Q9BZ95	1437 aa		13.93	□□□□□ -0.18
SECISBP2-208	ENST00000498819	AMIGO3	Q86WK7	504 aa		13.93	□□□□□ -0.18
SECISBP2-208	ENST00000498819	CGNL1	Q0VF96	1302 aa		13.92	□□□□□ -0.18
SECISBP2-208	ENST00000498819	MEGF6	O75095	1541 aa		13.92	□□□□□ -0.18
SECISBP2-208	ENST00000498819	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	13.92	□□□□□ -0.18
SECISBP2-208	ENST00000498819	CD163L1	Q9NR16	1453 aa		13.92	□□□□□ -0.18
SECISBP2-208	ENST00000498819	PHF14	O94880	888 aa		13.91	□□□□□ -0.18
SECISBP2-208	ENST00000498819	SSFA2	P28290	1259 aa		13.91	□□□□□ -0.18
SECISBP2-208	ENST00000498819	TGFB2	P61812	414 aa		13.91	□□□□□ -0.18
SECISBP2-208	ENST00000498819	BCS1L	Q9Y276	419 aa		13.91	□□□□□ -0.18
SECISBP2-208	ENST00000498819	EDC4	Q6P2E9	1401 aa	Known RBP	13.9	□□□□□ -0.18
SECISBP2-208	ENST00000498819	C4B	P0C0L5	1744 aa		13.9	□□□□□ -0.18
SECISBP2-208	ENST00000498819	ARHGAP27	Q6ZUM4	889 aa		13.9	□□□□□ -0.18
SECISBP2-208	ENST00000498819	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.9	□□□□□ -0.18
SECISBP2-208	ENST00000498819	SMARCC1	Q92922	1105 aa	Predicted RBP	13.9	□□□□□ -0.18
SECISBP2-208	ENST00000498819	PXDNL	A1KZ92	1463 aa		13.9	□□□□□ -0.18
SECISBP2-208	ENST00000498819	SLC34A2	O95436	690 aa		13.89	□□□□□ -0.19
SECISBP2-208	ENST00000498819	HOXC9	P31274	260 aa		13.89	□□□□□ -0.19
SECISBP2-208	ENST00000498819	MPRIP	Q6WCQ1	1025 aa		13.89	□□□□□ -0.19
SECISBP2-208	ENST00000498819	TAF1L	Q8IZX4	1826 aa		13.89	□□□□□ -0.19
SECISBP2-208	ENST00000498819	PLEKHG2	Q9H7P9	1386 aa		13.88	□□□□□ -0.19
SECISBP2-208	ENST00000498819	PCNT	O95613	3336 aa		13.88	□□□□□ -0.19
SECISBP2-208	ENST00000498819	TOGARAM1	Q9Y4F4	1720 aa		13.88	□□□□□ -0.19
SECISBP2-208	ENST00000498819	SMIM5	Q71RC9	77 aa		13.88	□□□□□ -0.19
SECISBP2-208	ENST00000498819	KDM2B	Q8NHM5	1336 aa		13.88	□□□□□ -0.19
SECISBP2-208	ENST00000498819	AMPH	P49418	695 aa		13.87	□□□□□ -0.19
SECISBP2-208	ENST00000498819	RAPGEF4	Q8WZA2	1011 aa		13.87	□□□□□ -0.19
SECISBP2-208	ENST00000498819	MAP3K19	Q56UN5	1328 aa		13.87	□□□□□ -0.19
SECISBP2-208	ENST00000498819	PCDH11X	Q9BZA7	1347 aa		13.87	□□□□□ -0.19
SECISBP2-208	ENST00000498819	PCDH11Y	Q9BZA8	1340 aa		13.87	□□□□□ -0.19
SECISBP2-208	ENST00000498819		A0A0G2JLW4	131 aa		13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	MMP10	P09238	476 aa		13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	HSPA1A	P0DMV8	641 aa	Known RBP	13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	HSPA1B	P0DMV9	641 aa	Known RBP	13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	NBPF6	Q5VWK0	638 aa		13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	C9orf131	Q5VYM1	1079 aa		13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	TMC1	Q8TDI8	760 aa		13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	NBPF4	Q96M43	638 aa		13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	TERF2IP	Q9NYB0	399 aa		13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	C10orf71	Q711Q0	1435 aa		13.86	□□□□□ -0.19
SECISBP2-208	ENST00000498819	ROCK2	O75116	1388 aa	Known RBP	13.85	□□□□□ -0.19
SECISBP2-208	ENST00000498819	UBR3	Q6ZT12	1888 aa		13.85	□□□□□ -0.19
SECISBP2-208	ENST00000498819	FCHSD2	O94868	740 aa		13.85	□□□□□ -0.19
SECISBP2-208	ENST00000498819	SMC1B	Q8NDV3	1235 aa		13.85	□□□□□ -0.19
SECISBP2-208	ENST00000498819	SLC12A5	Q9H2X9	1139 aa		13.85	□□□□□ -0.19
SECISBP2-208	ENST00000498819		A0A1W2PP64	1363 aa		13.84	□□□□□ -0.19
SECISBP2-208	ENST00000498819	TAT	P17735	454 aa	Predicted RBP	13.84	□□□□□ -0.19
SECISBP2-208	ENST00000498819	LINC00116	Q8NCU8	138 aa		13.84	□□□□□ -0.19
SECISBP2-208	ENST00000498819	L3MBTL2	Q969R5	705 aa		13.84	□□□□□ -0.19
SECISBP2-208	ENST00000498819	COG3	Q96JB2	828 aa		13.84	□□□□□ -0.19
SECISBP2-208	ENST00000498819	RRAGC	Q9HB90	399 aa		13.84	□□□□□ -0.19
SECISBP2-208	ENST00000498819	KIAA1551	Q9HCM1	1747 aa		13.84	□□□□□ -0.19
SECISBP2-208	ENST00000498819	DPEP1	P16444	411 aa		13.83	□□□□□ -0.2
SECISBP2-208	ENST00000498819	KCP	Q6ZWJ8	1503 aa		13.83	□□□□□ -0.2
SECISBP2-208	ENST00000498819	KIF13B	Q9NQT8	1826 aa		13.83	□□□□□ -0.2
SECISBP2-208	ENST00000498819	LOC102724428	A0A0B4J2F2	783 aa		13.82	□□□□□ -0.2
SECISBP2-208	ENST00000498819	GNPAT	O15228	680 aa		13.82	□□□□□ -0.2
SECISBP2-208	ENST00000498819	SIK1	P57059	783 aa		13.82	□□□□□ -0.2
SECISBP2-208	ENST00000498819	NLGN1	Q8N2Q7	840 aa		13.82	□□□□□ -0.2
SECISBP2-208	ENST00000498819	USHBP1	Q8N6Y0	703 aa		13.82	□□□□□ -0.2
SECISBP2-208	ENST00000498819	CCDC87	Q9NVE4	849 aa		13.82	□□□□□ -0.2
SECISBP2-208	ENST00000498819	RTL1	A6NKG5	1358 aa		13.82	□□□□□ -0.2
SECISBP2-208	ENST00000498819	CYP27B1	O15528	508 aa		13.81	□□□□□ -0.2
SECISBP2-208	ENST00000498819	FBLN1	P23142	703 aa		13.81	□□□□□ -0.2
SECISBP2-208	ENST00000498819	PIGB	Q92521	554 aa		13.81	□□□□□ -0.2
SECISBP2-208	ENST00000498819	RGPD2	P0DJD1	1756 aa		13.81	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms