RNA–Protein interactions for RNA: ENST00000498698.1

HMGCL-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-207ENST00000498698 STK32BQ9NY57 414 aa13.04□□□□□ -0.32
HMGCL-207ENST00000498698 NUP188Q5SRE5 1749 aa13.04□□□□□ -0.32
HMGCL-207ENST00000498698 TNNT2P45379 298 aaPredicted RBP13.03□□□□□ -0.32
HMGCL-207ENST00000498698 LRRC4BQ9NT99 713 aa13.03□□□□□ -0.32
HMGCL-207ENST00000498698 FAM208AQ9UK61 1670 aaKnown RBP13.02□□□□□ -0.32
HMGCL-207ENST00000498698 SBF2Q86WG5 1849 aa13.02□□□□□ -0.32
HMGCL-207ENST00000498698 SYTL4Q96C24 671 aaPredicted RBP13.02□□□□□ -0.33
HMGCL-207ENST00000498698 EYA1Q99502 592 aa13.02□□□□□ -0.33
HMGCL-207ENST00000498698 CYP27B1O15528 508 aa13.01□□□□□ -0.33
HMGCL-207ENST00000498698 KIF7Q2M1P5 1343 aa13.01□□□□□ -0.33
HMGCL-207ENST00000498698 NSD2O96028 1365 aa13.01□□□□□ -0.33
HMGCL-207ENST00000498698 NCAPD2Q15021 1401 aa13.01□□□□□ -0.33
HMGCL-207ENST00000498698 RGPD3A6NKT7 1758 aaPredicted RBP13.01□□□□□ -0.33
HMGCL-207ENST00000498698 RGPD4Q7Z3J3 1758 aa13.01□□□□□ -0.33
HMGCL-207ENST00000498698 NHSQ6T4R5 1651 aa13□□□□□ -0.33
HMGCL-207ENST00000498698 PCDH11XQ9BZA7 1347 aa13□□□□□ -0.33
HMGCL-207ENST00000498698 PCDH11YQ9BZA8 1340 aa13□□□□□ -0.33
HMGCL-207ENST00000498698 EIF4A2Q14240 407 aaKnown RBP13□□□□□ -0.33
HMGCL-207ENST00000498698 SLC27A3Q5K4L6 730 aa13□□□□□ -0.33
HMGCL-207ENST00000498698 ZBTB7AO95365 584 aa12.99□□□□□ -0.33
HMGCL-207ENST00000498698 ZNF827Q17R98 1081 aa12.99□□□□□ -0.33
HMGCL-207ENST00000498698 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
HMGCL-207ENST00000498698 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
HMGCL-207ENST00000498698 KIF20BQ96Q89 1820 aa12.98□□□□□ -0.33
HMGCL-207ENST00000498698 PTGER2P43116 358 aa12.98□□□□□ -0.33
HMGCL-207ENST00000498698 KCNQ4P56696 695 aa12.98□□□□□ -0.33
HMGCL-207ENST00000498698 AMER1Q5JTC6 1135 aaPredicted RBP12.98□□□□□ -0.33
HMGCL-207ENST00000498698 MORC1Q86VD1 984 aa12.98□□□□□ -0.33
HMGCL-207ENST00000498698 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.98□□□□□ -0.33
HMGCL-207ENST00000498698 NKX1-1Q15270 411 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-207ENST00000498698 SPG7Q9UQ90 795 aa12.97□□□□□ -0.33
HMGCL-207ENST00000498698 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
HMGCL-207ENST00000498698 PER1O15534 1290 aaPredicted RBP12.96□□□□□ -0.33
HMGCL-207ENST00000498698 MTFR1LQ9H019 292 aa12.96□□□□□ -0.33
HMGCL-207ENST00000498698 PPP1R1BQ9UD71 204 aaPredicted RBP12.96□□□□□ -0.33
HMGCL-207ENST00000498698 IGSF1Q8N6C5 1336 aa12.95□□□□□ -0.34
HMGCL-207ENST00000498698 SGIP1Q9BQI5 828 aa12.95□□□□□ -0.34
HMGCL-207ENST00000498698 CCNL1Q9UK58 526 aaPredicted RBP12.95□□□□□ -0.34
HMGCL-207ENST00000498698 MPRIPQ6WCQ1 1025 aa12.94□□□□□ -0.34
HMGCL-207ENST00000498698 RGPD2P0DJD1 1756 aa12.94□□□□□ -0.34
HMGCL-207ENST00000498698 PNPLA7Q6ZV29 1317 aa12.93□□□□□ -0.34
HMGCL-207ENST00000498698 BTAF1O14981 1849 aa12.93□□□□□ -0.34
HMGCL-207ENST00000498698 PAPPAQ13219 1627 aa12.93□□□□□ -0.34
HMGCL-207ENST00000498698 PHKG2P15735 406 aa12.93□□□□□ -0.34
HMGCL-207ENST00000498698 PIGBQ92521 554 aa12.93□□□□□ -0.34
HMGCL-207ENST00000498698 IFNL2Q8IZJ0 200 aa12.92□□□□□ -0.34
HMGCL-207ENST00000498698 SLC16A10Q8TF71 515 aa12.92□□□□□ -0.34
HMGCL-207ENST00000498698 TFCP2L1Q9NZI6 479 aa12.92□□□□□ -0.34
HMGCL-207ENST00000498698 ANKRD26Q9UPS8 1709 aa12.92□□□□□ -0.34
HMGCL-207ENST00000498698 PLEKHG2Q9H7P9 1386 aa12.92□□□□□ -0.34
HMGCL-207ENST00000498698 CASZ1Q86V15 1759 aa12.92□□□□□ -0.34
HMGCL-207ENST00000498698 SHANK3Q9BYB0 1731 aa12.91□□□□□ -0.34
HMGCL-207ENST00000498698 IL13P35225 146 aa12.91□□□□□ -0.34
HMGCL-207ENST00000498698 SMARCC1Q92922 1105 aaPredicted RBP12.91□□□□□ -0.34
HMGCL-207ENST00000498698 PALLDQ8WX93 1383 aa12.91□□□□□ -0.34
HMGCL-207ENST00000498698 AEBP1Q8IUX7 1158 aa12.9□□□□□ -0.34
HMGCL-207ENST00000498698 MTHFSP49914 203 aa12.89□□□□□ -0.35
HMGCL-207ENST00000498698 PLEKHO1Q53GL0 409 aaPredicted RBP12.89□□□□□ -0.35
HMGCL-207ENST00000498698 ARXQ96QS3 562 aa12.89□□□□□ -0.35
HMGCL-207ENST00000498698 TMOD3Q9NYL9 352 aa12.89□□□□□ -0.35
HMGCL-207ENST00000498698 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
HMGCL-207ENST00000498698 HMGB2P26583 209 aaKnown RBP12.88□□□□□ -0.35
HMGCL-207ENST00000498698 AMOTQ4VCS5 1084 aa12.88□□□□□ -0.35
HMGCL-207ENST00000498698 CC2D1BQ5T0F9 858 aaKnown RBP12.88□□□□□ -0.35
HMGCL-207ENST00000498698 SULT6B1Q6IMI4 303 aa12.88□□□□□ -0.35
HMGCL-207ENST00000498698 COL23A1Q86Y22 540 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-207ENST00000498698 SYT17Q9BSW7 474 aa12.88□□□□□ -0.35
HMGCL-207ENST00000498698 FHDC1Q9C0D6 1143 aaPredicted RBP12.88□□□□□ -0.35
HMGCL-207ENST00000498698 ASAP1Q9ULH1 1129 aa12.88□□□□□ -0.35
HMGCL-207ENST00000498698 KDRP35968 1356 aa12.87□□□□□ -0.35
HMGCL-207ENST00000498698 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
HMGCL-207ENST00000498698 ERVV-2B6SEH9 535 aa12.87□□□□□ -0.35
HMGCL-207ENST00000498698 DCAF5Q96JK2 942 aa12.87□□□□□ -0.35
HMGCL-207ENST00000498698 ATG3Q9NT62 314 aa12.87□□□□□ -0.35
HMGCL-207ENST00000498698 PKD1L3Q7Z443 1732 aa12.86□□□□□ -0.35
HMGCL-207ENST00000498698 LOC102724428A0A0B4J2F2 783 aa12.86□□□□□ -0.35
HMGCL-207ENST00000498698 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
HMGCL-207ENST00000498698 SIK1P57059 783 aa12.86□□□□□ -0.35
HMGCL-207ENST00000498698 ZNF530Q6P9A1 599 aaPredicted RBP12.86□□□□□ -0.35
HMGCL-207ENST00000498698 MAP2P11137 1827 aaKnown RBP12.85□□□□□ -0.35
HMGCL-207ENST00000498698 KAT6BQ8WYB5 2073 aa12.85□□□□□ -0.35
HMGCL-207ENST00000498698 MAP3K5Q99683 1374 aa12.84□□□□□ -0.35
HMGCL-207ENST00000498698 MSH5O43196 834 aa12.84□□□□□ -0.35
HMGCL-207ENST00000498698 POLD1P28340 1107 aa12.84□□□□□ -0.35
HMGCL-207ENST00000498698 ITPK1Q13572 414 aa12.84□□□□□ -0.35
HMGCL-207ENST00000498698 AMIGO3Q86WK7 504 aa12.84□□□□□ -0.35
HMGCL-207ENST00000498698 LINC00116Q8NCU8 138 aa12.84□□□□□ -0.35
HMGCL-207ENST00000498698 FLAD1Q8NFF5 587 aa12.84□□□□□ -0.35
HMGCL-207ENST00000498698 KDM6AO15550 1401 aaPredicted RBP12.83□□□□□ -0.36
HMGCL-207ENST00000498698 DCAF8L1A6NGE4 600 aa12.83□□□□□ -0.36
HMGCL-207ENST00000498698 DIAPH1O60610 1272 aaKnown RBP12.83□□□□□ -0.36
HMGCL-207ENST00000498698 C1orf141Q5JVX7 400 aa12.83□□□□□ -0.36
HMGCL-207ENST00000498698 AK7Q96M32 723 aa12.83□□□□□ -0.36
HMGCL-207ENST00000498698 LY75O60449 1722 aa12.82□□□□□ -0.36
HMGCL-207ENST00000498698 TOGARAM1Q9Y4F4 1720 aa12.82□□□□□ -0.36
HMGCL-207ENST00000498698 HMOX1P09601 288 aa12.82□□□□□ -0.36
HMGCL-207ENST00000498698 ATP6V1AP38606 617 aa12.82□□□□□ -0.36
HMGCL-207ENST00000498698 CABP4P57796 275 aa12.82□□□□□ -0.36
HMGCL-207ENST00000498698 CNGB1Q14028 1251 aaPredicted RBP12.82□□□□□ -0.36
HMGCL-207ENST00000498698 SMIM5Q71RC9 77 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms