RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 KDM2BQ8NHM5 1336 aa8.37□□□□□ -1.07
FXN-205ENST00000498653 VEGFBP49765 207 aa8.37□□□□□ -1.07
FXN-205ENST00000498653 SOX10P56693 466 aa8.37□□□□□ -1.07
FXN-205ENST00000498653 PIP4P2Q8N4L2 257 aa8.37□□□□□ -1.07
FXN-205ENST00000498653 MARCH10Q8NA82 808 aaPredicted RBP8.37□□□□□ -1.07
FXN-205ENST00000498653 PHF8Q9UPP1 1060 aa8.37□□□□□ -1.07
FXN-205ENST00000498653 BRCA1P38398 1863 aaKnown RBP8.36□□□□□ -1.07
FXN-205ENST00000498653 MSL1Q68DK7 614 aa8.35□□□□□ -1.07
FXN-205ENST00000498653 RRP7BPQ9NSQ0 103 aa8.35□□□□□ -1.07
FXN-205ENST00000498653 COL18A1P39060 1754 aa8.35□□□□□ -1.07
FXN-205ENST00000498653 USP54Q70EL1 1684 aa8.34□□□□□ -1.07
FXN-205ENST00000498653 KIF13BQ9NQT8 1826 aa8.34□□□□□ -1.07
FXN-205ENST00000498653 COL5A2P05997 1499 aaPredicted RBP8.34□□□□□ -1.07
FXN-205ENST00000498653 C9orf131Q5VYM1 1079 aa8.34□□□□□ -1.07
FXN-205ENST00000498653 CHADLQ6NUI6 762 aa8.34□□□□□ -1.07
FXN-205ENST00000498653 N4BP2Q86UW6 1770 aaPredicted RBP8.34□□□□□ -1.07
FXN-205ENST00000498653 SBF1O95248 1867 aa8.34□□□□□ -1.07
FXN-205ENST00000498653 VCANP13611 3396 aa8.33□□□□□ -1.08
FXN-205ENST00000498653 DDB1Q16531 1140 aa8.33□□□□□ -1.08
FXN-205ENST00000498653 SPTBN5Q9NRC6 3674 aaKnown RBP8.33□□□□□ -1.08
FXN-205ENST00000498653 CASP8AP2Q9UKL3 1982 aa8.33□□□□□ -1.08
FXN-205ENST00000498653 ARFGEF1Q9Y6D6 1849 aa8.33□□□□□ -1.08
FXN-205ENST00000498653 SPATA31E1Q6ZUB1 1445 aa8.32□□□□□ -1.08
FXN-205ENST00000498653 FARP1Q9Y4F1 1045 aaPredicted RBP8.32□□□□□ -1.08
FXN-205ENST00000498653 PLEKHH1Q9ULM0 1364 aa8.32□□□□□ -1.08
FXN-205ENST00000498653 CRB1P82279 1406 aa8.31□□□□□ -1.08
FXN-205ENST00000498653 MNX1P50219 401 aaPredicted RBP8.31□□□□□ -1.08
FXN-205ENST00000498653 LY75O60449 1722 aa8.31□□□□□ -1.08
FXN-205ENST00000498653 EVA1CP58658 441 aa8.3□□□□□ -1.08
FXN-205ENST00000498653 TFCP2L1Q9NZI6 479 aa8.3□□□□□ -1.08
FXN-205ENST00000498653 COL23A1Q86Y22 540 aaPredicted RBP8.29□□□□□ -1.08
FXN-205ENST00000498653 TIAM2Q8IVF5 1701 aa8.29□□□□□ -1.08
FXN-205ENST00000498653 MYOM3Q5VTT5 1437 aa8.29□□□□□ -1.08
FXN-205ENST00000498653 ZC3H6P61129 1189 aaKnown RBP8.28□□□□□ -1.08
FXN-205ENST00000498653 MAP2K1Q02750 393 aaPredicted RBP8.28□□□□□ -1.08
FXN-205ENST00000498653 GSE1Q14687 1217 aa8.28□□□□□ -1.08
FXN-205ENST00000498653 WAPLQ7Z5K2 1190 aa8.28□□□□□ -1.08
FXN-205ENST00000498653 FAM212AQ96EL1 285 aa8.28□□□□□ -1.08
FXN-205ENST00000498653 TRIOBPQ9H2D6 2365 aa8.28□□□□□ -1.08
FXN-205ENST00000498653 PRR36Q9H6K5 1346 aa8.28□□□□□ -1.08
FXN-205ENST00000498653 DGKZQ13574 1117 aa8.27□□□□□ -1.09
FXN-205ENST00000498653 ARHGAP27Q6ZUM4 889 aa8.27□□□□□ -1.09
FXN-205ENST00000498653 TSKSQ9UJT2 592 aa8.27□□□□□ -1.09
FXN-205ENST00000498653 USP6P35125 1406 aa8.27□□□□□ -1.09
FXN-205ENST00000498653 TOGARAM1Q9Y4F4 1720 aa8.26□□□□□ -1.09
FXN-205ENST00000498653 ABCC6O95255 1503 aa8.26□□□□□ -1.09
FXN-205ENST00000498653 PAK3O75914 559 aaPredicted RBP8.26□□□□□ -1.09
FXN-205ENST00000498653 UBTFP17480 764 aaKnown RBP8.26□□□□□ -1.09
FXN-205ENST00000498653 NBPF15Q8N660 670 aa8.26□□□□□ -1.09
FXN-205ENST00000498653 HIRIP3Q9BW71 556 aaPredicted RBP8.26□□□□□ -1.09
FXN-205ENST00000498653 RTN4Q9NQC3 1192 aaKnown RBP8.26□□□□□ -1.09
FXN-205ENST00000498653 PASKQ96RG2 1323 aa8.26□□□□□ -1.09
FXN-205ENST00000498653 ITSN1Q15811 1721 aa8.26□□□□□ -1.09
FXN-205ENST00000498653 RANBP2P49792 3224 aaKnown RBP8.25□□□□□ -1.09
FXN-205ENST00000498653 CPDO75976 1380 aa8.25□□□□□ -1.09
FXN-205ENST00000498653 ANKRD30BQ9BXX2 1392 aa8.25□□□□□ -1.09
FXN-205ENST00000498653 VEGFAP15692 232 aaPredicted RBP8.25□□□□□ -1.09
FXN-205ENST00000498653 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
FXN-205ENST00000498653 RNF181Q9P0P0 153 aa8.25□□□□□ -1.09
FXN-205ENST00000498653 CIZ1Q9ULV3 898 aaPredicted RBP8.25□□□□□ -1.09
FXN-205ENST00000498653 BCS1LQ9Y276 419 aa8.25□□□□□ -1.09
FXN-205ENST00000498653 ACIN1Q9UKV3 1341 aaKnown RBP8.25□□□□□ -1.09
FXN-205ENST00000498653 BRCA2P51587 3418 aa8.24□□□□□ -1.09
FXN-205ENST00000498653 POTECB2RU33 542 aa8.24□□□□□ -1.09
FXN-205ENST00000498653 NUBP1P53384 320 aa8.24□□□□□ -1.09
FXN-205ENST00000498653 KCNQ4P56696 695 aa8.24□□□□□ -1.09
FXN-205ENST00000498653 ZNF326Q5BKZ1 582 aaKnown RBP8.24□□□□□ -1.09
FXN-205ENST00000498653 DCAF8Q5TAQ9 597 aa8.24□□□□□ -1.09
FXN-205ENST00000498653 ACSBG1Q96GR2 724 aa8.24□□□□□ -1.09
FXN-205ENST00000498653 COL25A1Q9BXS0 654 aaPredicted RBP8.24□□□□□ -1.09
FXN-205ENST00000498653 PPLO60437 1756 aa8.23□□□□□ -1.09
FXN-205ENST00000498653 KDM6AO15550 1401 aaPredicted RBP8.23□□□□□ -1.09
FXN-205ENST00000498653 ANKARQ7Z5J8 1434 aa8.23□□□□□ -1.09
FXN-205ENST00000498653 RASSF10A6NK89 507 aa8.23□□□□□ -1.09
FXN-205ENST00000498653 C5P01031 1676 aa8.23□□□□□ -1.09
FXN-205ENST00000498653 WDR33Q9C0J8 1336 aaKnown RBP8.23□□□□□ -1.09
FXN-205ENST00000498653 SLIT3O75094 1523 aa8.23□□□□□ -1.09
FXN-205ENST00000498653 DAPK1P53355 1430 aa8.22□□□□□ -1.09
FXN-205ENST00000498653 LAMB4A4D0S4 1761 aa8.22□□□□□ -1.09
FXN-205ENST00000498653 GPRASP1Q5JY77 1395 aa8.22□□□□□ -1.09
FXN-205ENST00000498653 POTEIP0CG38 1075 aa8.21□□□□□ -1.1
FXN-205ENST00000498653 POTEJP0CG39 1038 aa8.21□□□□□ -1.1
FXN-205ENST00000498653 SNX27Q96L92 541 aa8.21□□□□□ -1.1
FXN-205ENST00000498653 ZC3H4Q9UPT8 1303 aaKnown RBP8.21□□□□□ -1.1
FXN-205ENST00000498653 MUC3AQ02505 3323 aa8.2□□□□□ -1.1
FXN-205ENST00000498653 GLTPD2A6NH11 291 aa8.2□□□□□ -1.1
FXN-205ENST00000498653 TMEM88BA6NKF7 163 aa8.2□□□□□ -1.1
FXN-205ENST00000498653 RASEFQ8IZ41 740 aa8.2□□□□□ -1.1
FXN-205ENST00000498653 PRDM6Q9NQX0 595 aa8.19□□□□□ -1.1
FXN-205ENST00000498653 KIF1BO60333 1816 aa8.19□□□□□ -1.1
FXN-205ENST00000498653 TAF1LQ8IZX4 1826 aa8.19□□□□□ -1.1
FXN-205ENST00000498653 ANKRD30AQ9BXX3 1397 aa8.19□□□□□ -1.1
FXN-205ENST00000498653 UBR3Q6ZT12 1888 aa8.18□□□□□ -1.1
FXN-205ENST00000498653 PLA2G5P39877 138 aa8.18□□□□□ -1.1
FXN-205ENST00000498653 LAMA3Q16787 3333 aa8.18□□□□□ -1.1
FXN-205ENST00000498653 ABCC11Q96J66 1382 aa8.18□□□□□ -1.1
FXN-205ENST00000498653 KAT6BQ8WYB5 2073 aa8.18□□□□□ -1.1
FXN-205ENST00000498653 ECM2O94769 699 aaPredicted RBP8.17□□□□□ -1.1
FXN-205ENST00000498653 FCHSD2O94868 740 aa8.17□□□□□ -1.1
FXN-205ENST00000498653 DEFB115Q30KQ5 88 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms