RNA–Protein interactions for RNA: ENST00000498614.5

COL6A1-206, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL6A1, Length 2,358 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-206ENST00000498614 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
COL6A1-206ENST00000498614 TMEM94Q12767 1356 aa20.46■□□□□ 0.87
COL6A1-206ENST00000498614 ZBTB7BO15156 539 aaPredicted RBP20.46■□□□□ 0.87
COL6A1-206ENST00000498614 RBM25P49756 843 aaKnown RBP20.46■□□□□ 0.87
COL6A1-206ENST00000498614 NUCB1Q02818 461 aa20.46■□□□□ 0.87
COL6A1-206ENST00000498614 AEBP1Q8IUX7 1158 aa20.46■□□□□ 0.87
COL6A1-206ENST00000498614 ACEP12821 1306 aa20.46■□□□□ 0.87
COL6A1-206ENST00000498614 TTC21BQ7Z4L5 1316 aa20.46■□□□□ 0.87
COL6A1-206ENST00000498614 NALCNQ8IZF0 1738 aa20.45■□□□□ 0.86
COL6A1-206ENST00000498614 CLCN1P35523 988 aa20.44■□□□□ 0.86
COL6A1-206ENST00000498614 EIF4A2Q14240 407 aaKnown RBP20.44■□□□□ 0.86
COL6A1-206ENST00000498614 ARHGAP45Q92619 1136 aa20.44■□□□□ 0.86
COL6A1-206ENST00000498614 RGPD8O14715 1765 aaPredicted RBP20.44■□□□□ 0.86
COL6A1-206ENST00000498614 SNX21Q969T3 373 aa20.44■□□□□ 0.86
COL6A1-206ENST00000498614 GRPEL1Q9HAV7 217 aa20.44■□□□□ 0.86
COL6A1-206ENST00000498614 SULT6B1Q6IMI4 303 aa20.43■□□□□ 0.86
COL6A1-206ENST00000498614 NWD1Q149M9 1564 aa20.43■□□□□ 0.86
COL6A1-206ENST00000498614 NRKQ7Z2Y5 1582 aa20.43■□□□□ 0.86
COL6A1-206ENST00000498614 CHD1LQ86WJ1 897 aa20.43■□□□□ 0.86
COL6A1-206ENST00000498614 TNPO1Q92973 898 aaKnown RBP20.42■□□□□ 0.86
COL6A1-206ENST00000498614 SOX12O15370 315 aa20.42■□□□□ 0.86
COL6A1-206ENST00000498614 ADGRL3Q9HAR2 1447 aa20.41■□□□□ 0.86
COL6A1-206ENST00000498614 TOPAZ1Q8N9V7 1692 aa20.41■□□□□ 0.86
COL6A1-206ENST00000498614 NAP1L5Q96NT1 182 aaPredicted RBP20.41■□□□□ 0.86
COL6A1-206ENST00000498614 ABCC4O15439 1325 aa20.41■□□□□ 0.86
COL6A1-206ENST00000498614 ESCO1Q5FWF5 840 aa20.4■□□□□ 0.86
COL6A1-206ENST00000498614 C19orf44Q9H6X5 657 aa20.4■□□□□ 0.86
COL6A1-206ENST00000498614 OVOS2A0A0J9YW53 1432 aa20.4■□□□□ 0.86
COL6A1-206ENST00000498614 OVOS2Q6IE36 1432 aa20.4■□□□□ 0.86
COL6A1-206ENST00000498614 ANKRD45Q5TZF3 282 aa20.39■□□□□ 0.86
COL6A1-206ENST00000498614 ORAI2Q96SN7 254 aa20.39■□□□□ 0.86
COL6A1-206ENST00000498614 USP6P35125 1406 aa20.39■□□□□ 0.85
COL6A1-206ENST00000498614 HSP90AB1P08238 724 aaKnown RBP20.39■□□□□ 0.85
COL6A1-206ENST00000498614 HSP90AB2PQ58FF8 381 aa20.39■□□□□ 0.85
COL6A1-206ENST00000498614 NGDNQ8NEJ9 315 aaKnown RBP20.39■□□□□ 0.85
COL6A1-206ENST00000498614 PLEKHG3A1L390 1219 aa20.38■□□□□ 0.85
COL6A1-206ENST00000498614 KIF2CQ99661 725 aa20.38■□□□□ 0.85
COL6A1-206ENST00000498614 CHMP4BQ9H444 224 aaKnown RBP20.38■□□□□ 0.85
COL6A1-206ENST00000498614 PEAK1Q9H792 1746 aa20.38■□□□□ 0.85
COL6A1-206ENST00000498614 KRT24Q2M2I5 525 aa20.37■□□□□ 0.85
COL6A1-206ENST00000498614 SIRT2Q8IXJ6 389 aa20.37■□□□□ 0.85
COL6A1-206ENST00000498614 BMP2KLQ5H9B9 411 aa20.37■□□□□ 0.85
COL6A1-206ENST00000498614 MCM10Q7L590 875 aa20.37■□□□□ 0.85
COL6A1-206ENST00000498614 CIZ1Q9ULV3 898 aaPredicted RBP20.37■□□□□ 0.85
COL6A1-206ENST00000498614 CD2BP2O95400 341 aaKnown RBP20.36■□□□□ 0.85
COL6A1-206ENST00000498614 RAB3GAP1Q15042 981 aa20.36■□□□□ 0.85
COL6A1-206ENST00000498614 GAS2L3Q86XJ1 694 aa20.36■□□□□ 0.85
COL6A1-206ENST00000498614 GCC1Q96CN9 775 aa20.36■□□□□ 0.85
COL6A1-206ENST00000498614 API5Q9BZZ5 524 aaKnown RBP20.36■□□□□ 0.85
COL6A1-206ENST00000498614 ATF3P18847 181 aa20.36■□□□□ 0.85
COL6A1-206ENST00000498614 ISY1Q9ULR0 285 aaKnown RBP20.36■□□□□ 0.85
COL6A1-206ENST00000498614 ERBB4Q15303 1308 aa20.35■□□□□ 0.85
COL6A1-206ENST00000498614 FOXD4L1Q9NU39 408 aa20.35■□□□□ 0.85
COL6A1-206ENST00000498614 GBP4Q96PP9 640 aa20.35■□□□□ 0.85
COL6A1-206ENST00000498614 XPCQ01831 940 aaPredicted RBP20.34■□□□□ 0.85
COL6A1-206ENST00000498614 FMN2Q9NZ56 1722 aa20.34■□□□□ 0.85
COL6A1-206ENST00000498614 PHF8Q9UPP1 1060 aa20.33■□□□□ 0.85
COL6A1-206ENST00000498614 ESPNB1AK53 854 aa20.32■□□□□ 0.84
COL6A1-206ENST00000498614 FOXO3O43524 673 aa20.32■□□□□ 0.84
COL6A1-206ENST00000498614 DDX17Q92841 729 aaKnown RBP20.32■□□□□ 0.84
COL6A1-206ENST00000498614 USP31Q70CQ4 1352 aa20.32■□□□□ 0.84
COL6A1-206ENST00000498614 TBC1D9Q6ZT07 1266 aa20.31■□□□□ 0.84
COL6A1-206ENST00000498614 RBM42Q9BTD8 480 aaKnown RBP20.31■□□□□ 0.84
COL6A1-206ENST00000498614 RGPD1P0DJD0 1748 aa20.31■□□□□ 0.84
COL6A1-206ENST00000498614 CHL1O00533 1208 aa20.31■□□□□ 0.84
COL6A1-206ENST00000498614 SSH2Q76I76 1423 aa20.3■□□□□ 0.84
COL6A1-206ENST00000498614 PLEKHG5O94827 1062 aa20.3■□□□□ 0.84
COL6A1-206ENST00000498614 HSP90AA1P07900 732 aaKnown RBP20.3■□□□□ 0.84
COL6A1-206ENST00000498614 NUTM2GQ5VZR2 741 aa20.3■□□□□ 0.84
COL6A1-206ENST00000498614 MAP3K19Q56UN5 1328 aa20.3■□□□□ 0.84
COL6A1-206ENST00000498614 MSH6P52701 1360 aa20.3■□□□□ 0.84
COL6A1-206ENST00000498614 XIRP1Q702N8 1843 aaKnown RBP20.29■□□□□ 0.84
COL6A1-206ENST00000498614 ANKARQ7Z5J8 1434 aa20.29■□□□□ 0.84
COL6A1-206ENST00000498614 K7ELQ4 463 aaPredicted RBP20.29■□□□□ 0.84
COL6A1-206ENST00000498614 SKOR2Q2VWA4 1001 aaPredicted RBP20.29■□□□□ 0.84
COL6A1-206ENST00000498614 GAS2L2Q8NHY3 880 aa20.28■□□□□ 0.84
COL6A1-206ENST00000498614 MIS18AQ9NYP9 233 aa20.28■□□□□ 0.84
COL6A1-206ENST00000498614 SSFA2P28290 1259 aa20.27■□□□□ 0.84
COL6A1-206ENST00000498614 CADPS2Q86UW7 1296 aa20.27■□□□□ 0.84
COL6A1-206ENST00000498614 RGS12O14924 1447 aa20.27■□□□□ 0.84
COL6A1-206ENST00000498614 PSME1Q06323 249 aa20.27■□□□□ 0.83
COL6A1-206ENST00000498614 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.83
COL6A1-206ENST00000498614 TTC21AQ8NDW8 1320 aa20.27■□□□□ 0.83
COL6A1-206ENST00000498614 C1orf167Q5SNV9 1468 aa20.27■□□□□ 0.83
COL6A1-206ENST00000498614 KIF24Q5T7B8 1368 aa20.26■□□□□ 0.83
COL6A1-206ENST00000498614 TRIM44Q96DX7 344 aaPredicted RBP20.26■□□□□ 0.83
COL6A1-206ENST00000498614 CRB1P82279 1406 aa20.26■□□□□ 0.83
COL6A1-206ENST00000498614 ARHGEF10O15013 1369 aa20.25■□□□□ 0.83
COL6A1-206ENST00000498614 KIAA0232Q92628 1395 aa20.25■□□□□ 0.83
COL6A1-206ENST00000498614 MTHFSDQ2M296 383 aaKnown RBP20.25■□□□□ 0.83
COL6A1-206ENST00000498614 MST1RQ04912 1400 aa20.25■□□□□ 0.83
COL6A1-206ENST00000498614 PTMSP20962 102 aa20.24■□□□□ 0.83
COL6A1-206ENST00000498614 HAP1P54257 671 aaPredicted RBP20.24■□□□□ 0.83
COL6A1-206ENST00000498614 FLT4P35916 1363 aa20.24■□□□□ 0.83
COL6A1-206ENST00000498614 AMPHP49418 695 aa20.23■□□□□ 0.83
COL6A1-206ENST00000498614 SBNO1A3KN83 1393 aa20.23■□□□□ 0.83
COL6A1-206ENST00000498614 RTF1Q92541 710 aaKnown RBP20.22■□□□□ 0.83
COL6A1-206ENST00000498614 DCTPP1Q9H773 170 aa20.22■□□□□ 0.83
COL6A1-206ENST00000498614 SLC4A2P04920 1241 aa20.22■□□□□ 0.83
COL6A1-206ENST00000498614 LMOD2Q6P5Q4 547 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms