RNA–Protein interactions for RNA: ENST00000498347.1

FAM3D-205, Transcript of family with sequence similarity 3 member D, humanhuman

TSL 2

Gene FAM3D, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3D-205ENST00000498347 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
FAM3D-205ENST00000498347 WNK3Q9BYP7 1800 aa13.13□□□□□ -0.31
FAM3D-205ENST00000498347 ARHGEF28Q8N1W1 1705 aaKnown RBP13.13□□□□□ -0.31
FAM3D-205ENST00000498347 WDR90Q96KV7 1748 aa13.12□□□□□ -0.31
FAM3D-205ENST00000498347 ARHGAP27Q6ZUM4 889 aa13.11□□□□□ -0.31
FAM3D-205ENST00000498347 ABCC6O95255 1503 aa13.11□□□□□ -0.31
FAM3D-205ENST00000498347 TTC21BQ7Z4L5 1316 aa13.11□□□□□ -0.31
FAM3D-205ENST00000498347 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
FAM3D-205ENST00000498347 RGPD5Q99666 1765 aa13.1□□□□□ -0.31
FAM3D-205ENST00000498347 ERBB3P21860 1342 aa13.1□□□□□ -0.31
FAM3D-205ENST00000498347 ANKRD36BQ8N2N9 1353 aa13.08□□□□□ -0.31
FAM3D-205ENST00000498347 SMC1BQ8NDV3 1235 aa13.08□□□□□ -0.32
FAM3D-205ENST00000498347 ANKRD24Q8TF21 1146 aa13.08□□□□□ -0.32
FAM3D-205ENST00000498347 RRAGCQ9HB90 399 aa13.07□□□□□ -0.32
FAM3D-205ENST00000498347 BCS1LQ9Y276 419 aa13.07□□□□□ -0.32
FAM3D-205ENST00000498347 TTC21AQ8NDW8 1320 aa13.07□□□□□ -0.32
FAM3D-205ENST00000498347 KDM2BQ8NHM5 1336 aa13.07□□□□□ -0.32
FAM3D-205ENST00000498347 USP47Q96K76 1375 aa13.07□□□□□ -0.32
FAM3D-205ENST00000498347 TUBGCP6Q96RT7 1819 aa13.06□□□□□ -0.32
FAM3D-205ENST00000498347 TGFB2P61812 414 aa13.06□□□□□ -0.32
FAM3D-205ENST00000498347 C9orf131Q5VYM1 1079 aa13.05□□□□□ -0.32
FAM3D-205ENST00000498347 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
FAM3D-205ENST00000498347 PCNTO95613 3336 aa13.03□□□□□ -0.32
FAM3D-205ENST00000498347 A0A0G2JLW4 131 aa13.03□□□□□ -0.32
FAM3D-205ENST00000498347 CENPJQ9HC77 1338 aaPredicted RBP13.03□□□□□ -0.32
FAM3D-205ENST00000498347 NSD2O96028 1365 aa13.03□□□□□ -0.32
FAM3D-205ENST00000498347 AK7Q96M32 723 aa13.02□□□□□ -0.33
FAM3D-205ENST00000498347 PRDM10Q9NQV6 1147 aa13.02□□□□□ -0.33
FAM3D-205ENST00000498347 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.01□□□□□ -0.33
FAM3D-205ENST00000498347 FCHSD2O94868 740 aa13.01□□□□□ -0.33
FAM3D-205ENST00000498347 NBPF1Q3BBV0 1214 aa13.01□□□□□ -0.33
FAM3D-205ENST00000498347 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
FAM3D-205ENST00000498347 LY75O60449 1722 aa13□□□□□ -0.33
FAM3D-205ENST00000498347 PLEKHG2Q9H7P9 1386 aa13□□□□□ -0.33
FAM3D-205ENST00000498347 FAM161AQ3B820 660 aa13□□□□□ -0.33
FAM3D-205ENST00000498347 CICQ96RK0 1608 aaPredicted RBP12.99□□□□□ -0.33
FAM3D-205ENST00000498347 EVC2Q86UK5 1308 aa12.99□□□□□ -0.33
FAM3D-205ENST00000498347 PHF14O94880 888 aa12.99□□□□□ -0.33
FAM3D-205ENST00000498347 SMIM5Q71RC9 77 aa12.99□□□□□ -0.33
FAM3D-205ENST00000498347 NFAT5O94916 1531 aa12.98□□□□□ -0.33
FAM3D-205ENST00000498347 C10orf71Q711Q0 1435 aa12.98□□□□□ -0.33
FAM3D-205ENST00000498347 VEGFAP15692 232 aaPredicted RBP12.98□□□□□ -0.33
FAM3D-205ENST00000498347 SSFA2P28290 1259 aa12.98□□□□□ -0.33
FAM3D-205ENST00000498347 IP6K1Q92551 441 aa12.98□□□□□ -0.33
FAM3D-205ENST00000498347 SMARCC1Q92922 1105 aaPredicted RBP12.98□□□□□ -0.33
FAM3D-205ENST00000498347 MMP10P09238 476 aa12.97□□□□□ -0.33
FAM3D-205ENST00000498347 DPEP1P16444 411 aa12.97□□□□□ -0.33
FAM3D-205ENST00000498347 AMIGO3Q86WK7 504 aa12.97□□□□□ -0.33
FAM3D-205ENST00000498347 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.97□□□□□ -0.33
FAM3D-205ENST00000498347 LTV1Q96GA3 475 aaPredicted RBP12.97□□□□□ -0.33
FAM3D-205ENST00000498347 RNF181Q9P0P0 153 aa12.97□□□□□ -0.33
FAM3D-205ENST00000498347 USP31Q70CQ4 1352 aa12.96□□□□□ -0.33
FAM3D-205ENST00000498347 KTN1Q86UP2 1357 aaKnown RBP12.96□□□□□ -0.33
FAM3D-205ENST00000498347 KCPQ6ZWJ8 1503 aa12.95□□□□□ -0.34
FAM3D-205ENST00000498347 FOXN1O15353 648 aa12.95□□□□□ -0.34
FAM3D-205ENST00000498347 MLLT1Q03111 559 aaPredicted RBP12.95□□□□□ -0.34
FAM3D-205ENST00000498347 MPRIPQ6WCQ1 1025 aa12.95□□□□□ -0.34
FAM3D-205ENST00000498347 NLGN1Q8N2Q7 840 aa12.95□□□□□ -0.34
FAM3D-205ENST00000498347 PIM2Q9P1W9 311 aa12.95□□□□□ -0.34
FAM3D-205ENST00000498347 NSD3Q9BZ95 1437 aa12.95□□□□□ -0.34
FAM3D-205ENST00000498347 PXDNLA1KZ92 1463 aa12.94□□□□□ -0.34
FAM3D-205ENST00000498347 CTCFP49711 727 aaPredicted RBP12.94□□□□□ -0.34
FAM3D-205ENST00000498347 CCDC87Q9NVE4 849 aa12.94□□□□□ -0.34
FAM3D-205ENST00000498347 PALLDQ8WX93 1383 aa12.94□□□□□ -0.34
FAM3D-205ENST00000498347 KCNA3P22001 575 aa12.93□□□□□ -0.34
FAM3D-205ENST00000498347 RGS19P49795 217 aa12.93□□□□□ -0.34
FAM3D-205ENST00000498347 TMF1P82094 1093 aa12.93□□□□□ -0.34
FAM3D-205ENST00000498347 NME9Q86XW9 330 aa12.93□□□□□ -0.34
FAM3D-205ENST00000498347 ABHD8Q96I13 439 aa12.93□□□□□ -0.34
FAM3D-205ENST00000498347 CGNL1Q0VF96 1302 aa12.92□□□□□ -0.34
FAM3D-205ENST00000498347 DALRD3Q5D0E6 543 aaKnown RBP12.92□□□□□ -0.34
FAM3D-205ENST00000498347 AIDAQ96BJ3 306 aa12.92□□□□□ -0.34
FAM3D-205ENST00000498347 DCAF5Q96JK2 942 aa12.92□□□□□ -0.34
FAM3D-205ENST00000498347 QRICH2Q9H0J4 1663 aa12.92□□□□□ -0.34
FAM3D-205ENST00000498347 GLTPD2A6NH11 291 aa12.91□□□□□ -0.34
FAM3D-205ENST00000498347 CREBZFQ9NS37 354 aa12.91□□□□□ -0.34
FAM3D-205ENST00000498347 MKRN1Q9UHC7 482 aaKnown RBP12.91□□□□□ -0.34
FAM3D-205ENST00000498347 TRAPPC3LQ5T215 181 aa12.9□□□□□ -0.34
FAM3D-205ENST00000498347 PARP3Q9Y6F1 533 aa12.9□□□□□ -0.34
FAM3D-205ENST00000498347 C5P01031 1676 aa12.89□□□□□ -0.35
FAM3D-205ENST00000498347 ZC3H4Q9UPT8 1303 aaKnown RBP12.89□□□□□ -0.35
FAM3D-205ENST00000498347 GNPATO15228 680 aa12.89□□□□□ -0.35
FAM3D-205ENST00000498347 RAPGEF4Q8WZA2 1011 aa12.89□□□□□ -0.35
FAM3D-205ENST00000498347 USP54Q70EL1 1684 aa12.89□□□□□ -0.35
FAM3D-205ENST00000498347 DOT1LQ8TEK3 1739 aa12.88□□□□□ -0.35
FAM3D-205ENST00000498347 LOC102724428A0A0B4J2F2 783 aa12.88□□□□□ -0.35
FAM3D-205ENST00000498347 LBX1P52954 281 aa12.88□□□□□ -0.35
FAM3D-205ENST00000498347 SIK1P57059 783 aa12.88□□□□□ -0.35
FAM3D-205ENST00000498347 LINC00116Q8NCU8 138 aa12.88□□□□□ -0.35
FAM3D-205ENST00000498347 TATP17735 454 aaPredicted RBP12.87□□□□□ -0.35
FAM3D-205ENST00000498347 AMPHP49418 695 aa12.87□□□□□ -0.35
FAM3D-205ENST00000498347 PIGBQ92521 554 aa12.87□□□□□ -0.35
FAM3D-205ENST00000498347 C4BP0C0L5 1744 aa12.87□□□□□ -0.35
FAM3D-205ENST00000498347 N4BP2Q86UW6 1770 aaPredicted RBP12.86□□□□□ -0.35
FAM3D-205ENST00000498347 TAF1LQ8IZX4 1826 aa12.86□□□□□ -0.35
FAM3D-205ENST00000498347 CCDC85CA6NKD9 419 aa12.86□□□□□ -0.35
FAM3D-205ENST00000498347 HOXC9P31274 260 aa12.86□□□□□ -0.35
FAM3D-205ENST00000498347 NBPF6Q5VWK0 638 aa12.86□□□□□ -0.35
FAM3D-205ENST00000498347 NBPF4Q96M43 638 aa12.86□□□□□ -0.35
FAM3D-205ENST00000498347 WBP1LQ9NX94 342 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms