RNA–Protein interactions for RNA: ENST00000498090.1

AFF3-215, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 2

Gene AFF3, Length 1,673 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-215ENST00000498090 COG6Q9Y2V7 657 aa15.85■□□□□ 0.13
AFF3-215ENST00000498090 ABCC6O95255 1503 aa15.85■□□□□ 0.13
AFF3-215ENST00000498090 RGS3P49796 1198 aa15.84■□□□□ 0.13
AFF3-215ENST00000498090 SKAP1Q86WV1 359 aa15.84■□□□□ 0.13
AFF3-215ENST00000498090 RWDD1Q9H446 243 aaPredicted RBP15.84■□□□□ 0.13
AFF3-215ENST00000498090 AXIN2Q9Y2T1 843 aa15.84■□□□□ 0.13
AFF3-215ENST00000498090 LMO7Q8WWI1 1683 aa15.84■□□□□ 0.13
AFF3-215ENST00000498090 CHRNA2Q15822 529 aa15.83■□□□□ 0.13
AFF3-215ENST00000498090 PANK1Q8TE04 598 aa15.83■□□□□ 0.13
AFF3-215ENST00000498090 FRAT1Q92837 279 aaPredicted RBP15.83■□□□□ 0.13
AFF3-215ENST00000498090 RRP7AQ9Y3A4 280 aaKnown RBP15.83■□□□□ 0.13
AFF3-215ENST00000498090 SPATA31A6Q5VVP1 1343 aa15.83■□□□□ 0.12
AFF3-215ENST00000498090 ZKSCAN2Q63HK3 967 aa15.83■□□□□ 0.12
AFF3-215ENST00000498090 PLEKHF1Q96S99 279 aa15.83■□□□□ 0.12
AFF3-215ENST00000498090 LTV1Q96GA3 475 aaPredicted RBP15.82■□□□□ 0.12
AFF3-215ENST00000498090 HAP1P54257 671 aaPredicted RBP15.81■□□□□ 0.12
AFF3-215ENST00000498090 POTEDQ86YR6 584 aa15.81■□□□□ 0.12
AFF3-215ENST00000498090 RSPH6AQ9H0K4 717 aa15.81■□□□□ 0.12
AFF3-215ENST00000498090 RGS17Q9UGC6 210 aaPredicted RBP15.81■□□□□ 0.12
AFF3-215ENST00000498090 RGPD5Q99666 1765 aa15.81■□□□□ 0.12
AFF3-215ENST00000498090 IGSF1Q8N6C5 1336 aa15.81■□□□□ 0.12
AFF3-215ENST00000498090 HMOX1P09601 288 aa15.8■□□□□ 0.12
AFF3-215ENST00000498090 MVPQ14764 893 aaKnown RBP15.8■□□□□ 0.12
AFF3-215ENST00000498090 AEBP1Q8IUX7 1158 aa15.8■□□□□ 0.12
AFF3-215ENST00000498090 PRDM11Q9NQV5 511 aa15.8■□□□□ 0.12
AFF3-215ENST00000498090 CAMTA1Q9Y6Y1 1673 aa15.8■□□□□ 0.12
AFF3-215ENST00000498090 TMPOP42166 694 aaKnown RBP15.79■□□□□ 0.12
AFF3-215ENST00000498090 ANKRD24Q8TF21 1146 aa15.79■□□□□ 0.12
AFF3-215ENST00000498090 EYA1Q99502 592 aa15.79■□□□□ 0.12
AFF3-215ENST00000498090 LAS1LQ9Y4W2 734 aaKnown RBP15.79■□□□□ 0.12
AFF3-215ENST00000498090 ERBB3P21860 1342 aa15.79■□□□□ 0.12
AFF3-215ENST00000498090 ZNF428Q96B54 188 aa15.79■□□□□ 0.12
AFF3-215ENST00000498090 NCAPD2Q15021 1401 aa15.78■□□□□ 0.12
AFF3-215ENST00000498090 DZIP1LQ8IYY4 767 aaKnown RBP15.78■□□□□ 0.12
AFF3-215ENST00000498090 KDRP35968 1356 aa15.78■□□□□ 0.12
AFF3-215ENST00000498090 VIRMAQ69YN4 1812 aaKnown RBP15.77■□□□□ 0.12
AFF3-215ENST00000498090 FAM83GA6ND36 823 aa15.77■□□□□ 0.12
AFF3-215ENST00000498090 NUTM2BA6NNL0 878 aaPredicted RBP15.77■□□□□ 0.12
AFF3-215ENST00000498090 NUTM2EB1AL46 878 aaPredicted RBP15.77■□□□□ 0.12
AFF3-215ENST00000498090 FCHSD2O94868 740 aa15.77■□□□□ 0.12
AFF3-215ENST00000498090 PRKAR2BP31323 418 aa15.77■□□□□ 0.12
AFF3-215ENST00000498090 SULT6B1Q6IMI4 303 aa15.77■□□□□ 0.12
AFF3-215ENST00000498090 NUTM2AQ8IVF1 878 aaPredicted RBP15.77■□□□□ 0.12
AFF3-215ENST00000498090 FTSJ3Q8IY81 847 aaKnown RBP15.77■□□□□ 0.12
AFF3-215ENST00000498090 UPF2Q9HAU5 1272 aaKnown RBP15.77■□□□□ 0.12
AFF3-215ENST00000498090 COL5A2P05997 1499 aaPredicted RBP15.77■□□□□ 0.12
AFF3-215ENST00000498090 BECN1Q14457 450 aa15.76■□□□□ 0.11
AFF3-215ENST00000498090 NBPF6Q5VWK0 638 aa15.76■□□□□ 0.11
AFF3-215ENST00000498090 USHBP1Q8N6Y0 703 aa15.76■□□□□ 0.11
AFF3-215ENST00000498090 NBPF4Q96M43 638 aa15.76■□□□□ 0.11
AFF3-215ENST00000498090 RGPD2P0DJD1 1756 aa15.76■□□□□ 0.11
AFF3-215ENST00000498090 COL14A1Q05707 1796 aaKnown RBP15.76■□□□□ 0.11
AFF3-215ENST00000498090 DDX19BQ9UMR2 479 aa15.76■□□□□ 0.11
AFF3-215ENST00000498090 IPO8O15397 1037 aaKnown RBP15.75■□□□□ 0.11
AFF3-215ENST00000498090 RLBP1P12271 317 aa15.75■□□□□ 0.11
AFF3-215ENST00000498090 CALD1Q05682 793 aaKnown RBP15.75■□□□□ 0.11
AFF3-215ENST00000498090 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
AFF3-215ENST00000498090 PCDHB15Q9Y5E8 787 aa15.75■□□□□ 0.11
AFF3-215ENST00000498090 KIF16BQ96L93 1317 aa15.75■□□□□ 0.11
AFF3-215ENST00000498090 FAM208AQ9UK61 1670 aaKnown RBP15.74■□□□□ 0.11
AFF3-215ENST00000498090 HDAC1Q13547 482 aaPredicted RBP15.74■□□□□ 0.11
AFF3-215ENST00000498090 ALDH1L2Q3SY69 923 aa15.74■□□□□ 0.11
AFF3-215ENST00000498090 ILDR2Q71H61 639 aa15.74■□□□□ 0.11
AFF3-215ENST00000498090 ADAMTS2O95450 1211 aa15.73■□□□□ 0.11
AFF3-215ENST00000498090 PHACTR3Q96KR7 559 aa15.73■□□□□ 0.11
AFF3-215ENST00000498090 CHMP4BQ9H444 224 aaKnown RBP15.73■□□□□ 0.11
AFF3-215ENST00000498090 SMC4Q9NTJ3 1288 aa15.73■□□□□ 0.11
AFF3-215ENST00000498090 BRPF1P55201 1214 aaPredicted RBP15.73■□□□□ 0.11
AFF3-215ENST00000498090 PLCH1Q4KWH8 1693 aa15.73■□□□□ 0.11
AFF3-215ENST00000498090 RIPK4P57078 832 aa15.72■□□□□ 0.11
AFF3-215ENST00000498090 EXOSC9Q06265 439 aaKnown RBP15.72■□□□□ 0.11
AFF3-215ENST00000498090 NFKBIBQ15653 356 aa15.72■□□□□ 0.11
AFF3-215ENST00000498090 ATF7IPQ6VMQ6 1270 aa15.72■□□□□ 0.11
AFF3-215ENST00000498090 WDR17Q8IZU2 1322 aa15.71■□□□□ 0.11
AFF3-215ENST00000498090 PDZRN3Q9UPQ7 1066 aa15.71■□□□□ 0.11
AFF3-215ENST00000498090 NRAPQ86VF7 1730 aa15.71■□□□□ 0.11
AFF3-215ENST00000498090 POTEAQ6S8J7 498 aa15.7■□□□□ 0.1
AFF3-215ENST00000498090 BCL2L13Q9BXK5 485 aa15.7■□□□□ 0.1
AFF3-215ENST00000498090 BTG4Q9NY30 223 aa15.7■□□□□ 0.1
AFF3-215ENST00000498090 CSB-PGBD3P0DP91 1061 aa15.7■□□□□ 0.1
AFF3-215ENST00000498090 NLRP2Q9NX02 1062 aa15.7■□□□□ 0.1
AFF3-215ENST00000498090 SLIT2O94813 1529 aa15.69■□□□□ 0.1
AFF3-215ENST00000498090 TRIM27P14373 513 aa15.69■□□□□ 0.1
AFF3-215ENST00000498090 MEX3CQ5U5Q3 659 aaKnown RBP15.69■□□□□ 0.1
AFF3-215ENST00000498090 LARP1Q6PKG0 1096 aaKnown RBP15.69■□□□□ 0.1
AFF3-215ENST00000498090 SSH1Q8WYL5 1049 aa15.69■□□□□ 0.1
AFF3-215ENST00000498090 TSR2Q969E8 191 aaKnown RBP15.69■□□□□ 0.1
AFF3-215ENST00000498090 STRN4Q9NRL3 753 aa15.69■□□□□ 0.1
AFF3-215ENST00000498090 NFE2L2Q16236 605 aa15.68■□□□□ 0.1
AFF3-215ENST00000498090 C8orf37Q96NL8 207 aa15.68■□□□□ 0.1
AFF3-215ENST00000498090 MEGF6O75095 1541 aa15.67■□□□□ 0.1
AFF3-215ENST00000498090 GSE1Q14687 1217 aa15.67■□□□□ 0.1
AFF3-215ENST00000498090 AFF2P51816 1311 aa15.67■□□□□ 0.1
AFF3-215ENST00000498090 LMOD3Q0VAK6 560 aa15.67■□□□□ 0.1
AFF3-215ENST00000498090 ARHGAP45Q92619 1136 aa15.67■□□□□ 0.1
AFF3-215ENST00000498090 TBC1D32Q96NH3 1257 aa15.67■□□□□ 0.1
AFF3-215ENST00000498090 SLC4A3P48751 1232 aa15.66■□□□□ 0.1
AFF3-215ENST00000498090 MTHFSDQ2M296 383 aaKnown RBP15.66■□□□□ 0.1
AFF3-215ENST00000498090 TOM1L2Q6ZVM7 507 aa15.66■□□□□ 0.1
AFF3-215ENST00000498090 FNBP4Q8N3X1 1017 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms