RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 PGPEP1Q9NXJ5 209 aa5.9□□□□□ -1.46
RIF1-212ENST00000498041 ERVH48-1M5A8F1 160 aa5.89□□□□□ -1.47
RIF1-212ENST00000498041 GDF11O95390 407 aa5.89□□□□□ -1.47
RIF1-212ENST00000498041 VSIG8P0DPA2 414 aa5.89□□□□□ -1.47
RIF1-212ENST00000498041 PHTF2Q8N3S3 785 aa5.89□□□□□ -1.47
RIF1-212ENST00000498041 TMEM151AQ8N4L1 468 aa5.89□□□□□ -1.47
RIF1-212ENST00000498041 GPR161Q8N6U8 529 aaKnown RBP5.89□□□□□ -1.47
RIF1-212ENST00000498041 RNF135Q8IUD6 432 aa5.88□□□□□ -1.47
RIF1-212ENST00000498041 MEIOBQ8N635 442 aa5.88□□□□□ -1.47
RIF1-212ENST00000498041 ADAMTS19Q8TE59 1207 aa5.88□□□□□ -1.47
RIF1-212ENST00000498041 TMPRSS4Q9NRS4 437 aa5.88□□□□□ -1.47
RIF1-212ENST00000498041 ZNF777Q9ULD5 760 aaPredicted RBP5.88□□□□□ -1.47
RIF1-212ENST00000498041 SOS2Q07890 1332 aaPredicted RBP5.88□□□□□ -1.47
RIF1-212ENST00000498041 CDC14CA4D256 554 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 TTLL8A6PVC2 850 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 KRT76Q01546 638 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 RASSF7Q02833 373 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 KCNMA1Q12791 1236 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 CBLBQ13191 982 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 SVOPQ8N4V2 548 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 GLMNQ92990 594 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 CALR3Q96L12 384 aaKnown RBP5.87□□□□□ -1.47
RIF1-212ENST00000498041 COL25A1Q9BXS0 654 aaPredicted RBP5.87□□□□□ -1.47
RIF1-212ENST00000498041 ADAMTS8Q9UP79 889 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 PCDHB11Q9Y5F2 797 aa5.87□□□□□ -1.47
RIF1-212ENST00000498041 PTSQ03393 145 aa5.86□□□□□ -1.47
RIF1-212ENST00000498041 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.86□□□□□ -1.47
RIF1-212ENST00000498041 MAP7D1Q3KQU3 841 aa5.86□□□□□ -1.47
RIF1-212ENST00000498041 ZNF784Q8NCA9 323 aaPredicted RBP5.86□□□□□ -1.47
RIF1-212ENST00000498041 NFATC2IPQ8NCF5 419 aa5.86□□□□□ -1.47
RIF1-212ENST00000498041 CCDC85AQ96PX6 553 aaPredicted RBP5.86□□□□□ -1.47
RIF1-212ENST00000498041 TSEN34Q9BSV6 310 aaKnown RBP5.86□□□□□ -1.47
RIF1-212ENST00000498041 CHIC2Q9UKJ5 165 aa5.86□□□□□ -1.47
RIF1-212ENST00000498041 DOLKQ9UPQ8 538 aa5.86□□□□□ -1.47
RIF1-212ENST00000498041 LILRA1O75019 489 aa5.85□□□□□ -1.47
RIF1-212ENST00000498041 GPAT2Q6NUI2 795 aa5.85□□□□□ -1.47
RIF1-212ENST00000498041 Q6ZVU0 165 aa5.85□□□□□ -1.47
RIF1-212ENST00000498041 PLPP7Q8NBV4 271 aa5.85□□□□□ -1.47
RIF1-212ENST00000498041 ESF1Q9H501 851 aaKnown RBP5.85□□□□□ -1.47
RIF1-212ENST00000498041 CYLDQ9NQC7 956 aa5.85□□□□□ -1.47
RIF1-212ENST00000498041 PIK3CDO00329 1044 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 SKIP12755 728 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 IRS1P35568 1242 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 ERVK-9P63128 1117 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 TSGA10IPQ3SY00 556 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 RNFT1Q5M7Z0 435 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 CC2D2BQ6DHV5 1058 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 VWA5B2Q8N398 1253 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 CCDC155Q8N6L0 562 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 AGBL1Q96MI9 1066 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 CDCA7Q9BWT1 371 aaPredicted RBP5.84□□□□□ -1.47
RIF1-212ENST00000498041 TIMELESSQ9UNS1 1208 aa5.84□□□□□ -1.47
RIF1-212ENST00000498041 LZTS3O60299 673 aaPredicted RBP5.83□□□□□ -1.48
RIF1-212ENST00000498041 MYCP01106 439 aaPredicted RBP5.83□□□□□ -1.48
RIF1-212ENST00000498041 ADD1P35611 737 aaKnown RBP5.83□□□□□ -1.48
RIF1-212ENST00000498041 GSK3AP49840 483 aa5.83□□□□□ -1.48
RIF1-212ENST00000498041 RELBQ01201 579 aa5.83□□□□□ -1.48
RIF1-212ENST00000498041 USP4Q13107 963 aa5.83□□□□□ -1.48
RIF1-212ENST00000498041 WHAMMQ8TF30 809 aa5.83□□□□□ -1.48
RIF1-212ENST00000498041 SIRT1Q96EB6 747 aa5.83□□□□□ -1.48
RIF1-212ENST00000498041 UCN2Q96RP3 112 aa5.83□□□□□ -1.48
RIF1-212ENST00000498041 RNF225M0QZC1 329 aaPredicted RBP5.82□□□□□ -1.48
RIF1-212ENST00000498041 ATP9BO43861 1147 aa5.82□□□□□ -1.48
RIF1-212ENST00000498041 ADH1AP07327 375 aa5.82□□□□□ -1.48
RIF1-212ENST00000498041 SCTRP47872 440 aa5.82□□□□□ -1.48
RIF1-212ENST00000498041 MARSP56192 900 aaKnown RBP5.82□□□□□ -1.48
RIF1-212ENST00000498041 OXLD1Q5BKU9 147 aa5.82□□□□□ -1.48
RIF1-212ENST00000498041 ZNF385CQ66K41 422 aaPredicted RBP5.82□□□□□ -1.48
RIF1-212ENST00000498041 TBC1D9Q6ZT07 1266 aa5.82□□□□□ -1.48
RIF1-212ENST00000498041 POLMQ9NP87 494 aaPredicted RBP5.82□□□□□ -1.48
RIF1-212ENST00000498041 USP17L5A8MUK1 530 aa5.81□□□□□ -1.48
RIF1-212ENST00000498041 EML3Q32P44 896 aa5.81□□□□□ -1.48
RIF1-212ENST00000498041 CYP2U1Q7Z449 544 aa5.81□□□□□ -1.48
RIF1-212ENST00000498041 PPP1R12CQ9BZL4 782 aa5.81□□□□□ -1.48
RIF1-212ENST00000498041 OSBPL3Q9H4L5 887 aa5.81□□□□□ -1.48
RIF1-212ENST00000498041 ZNF395Q9H8N7 513 aaPredicted RBP5.81□□□□□ -1.48
RIF1-212ENST00000498041 TFIP11Q9UBB9 837 aaKnown RBP5.81□□□□□ -1.48
RIF1-212ENST00000498041 PALM3A6NDB9 673 aaPredicted RBP5.8□□□□□ -1.48
RIF1-212ENST00000498041 ATP5J2-PTCD1G3V325 749 aa5.8□□□□□ -1.48
RIF1-212ENST00000498041 PTGIRP43119 386 aa5.8□□□□□ -1.48
RIF1-212ENST00000498041 CTSOP43234 321 aaPredicted RBP5.8□□□□□ -1.48
RIF1-212ENST00000498041 SV2AQ7L0J3 742 aa5.8□□□□□ -1.48
RIF1-212ENST00000498041 PLEKHM2Q8IWE5 1019 aa5.8□□□□□ -1.48
RIF1-212ENST00000498041 INSM2Q96T92 566 aaPredicted RBP5.8□□□□□ -1.48
RIF1-212ENST00000498041 USP17L3A6NCW0 530 aa5.79□□□□□ -1.48
RIF1-212ENST00000498041 USP17L4A6NCW7 530 aa5.79□□□□□ -1.48
RIF1-212ENST00000498041 ARID3CA6NKF2 412 aa5.79□□□□□ -1.48
RIF1-212ENST00000498041 NCOA4Q13772 614 aa5.79□□□□□ -1.48
RIF1-212ENST00000498041 USP17L2Q6R6M4 530 aa5.79□□□□□ -1.48
RIF1-212ENST00000498041 USP17L1Q7RTZ2 530 aa5.79□□□□□ -1.48
RIF1-212ENST00000498041 DEPDC4Q8N2C3 294 aa5.79□□□□□ -1.48
RIF1-212ENST00000498041 KDF1Q8NAX2 398 aaPredicted RBP5.79□□□□□ -1.48
RIF1-212ENST00000498041 NOD1Q9Y239 953 aa5.79□□□□□ -1.48
RIF1-212ENST00000498041 SPINT1O43278 529 aa5.78□□□□□ -1.48
RIF1-212ENST00000498041 GNRH1P01148 92 aa5.78□□□□□ -1.48
RIF1-212ENST00000498041 ITGA6P23229 1130 aa5.78□□□□□ -1.48
RIF1-212ENST00000498041 CCDC97Q96F63 343 aaPredicted RBP5.78□□□□□ -1.48
RIF1-212ENST00000498041 SERPINA10Q9UK55 444 aa5.78□□□□□ -1.48
RIF1-212ENST00000498041 MAFBQ9Y5Q3 323 aaPredicted RBP5.78□□□□□ -1.48
RIF1-212ENST00000498041 A0A1W2PRU2 124 aa5.77□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms