RNA–Protein interactions for RNA: ENST00000498035.5

HM13-224, Transcript of histocompatibility minor 13, human

TSL 2 BASIC

Gene HM13, Length 3,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HM13-224	ENST00000498035	SMC5	Q8IY18	1101 aa		10.71	□□□□□ -0.69
HM13-224	ENST00000498035	SERPINA10	Q9UK55	444 aa		10.71	□□□□□ -0.69
HM13-224	ENST00000498035	LMNB1	P20700	586 aa		10.71	□□□□□ -0.69
HM13-224	ENST00000498035	MAMSTR	Q6ZN01	415 aa		10.71	□□□□□ -0.69
HM13-224	ENST00000498035	PAIP2	Q9BPZ3	127 aa	Known RBP	10.71	□□□□□ -0.69
HM13-224	ENST00000498035	DIAPH1	O60610	1272 aa	Known RBP	10.71	□□□□□ -0.7
HM13-224	ENST00000498035	SETDB1	Q15047	1291 aa		10.71	□□□□□ -0.7
HM13-224	ENST00000498035	TDO2	P48775	406 aa		10.7	□□□□□ -0.7
HM13-224	ENST00000498035	MCCD1	P59942	119 aa	Predicted RBP	10.7	□□□□□ -0.7
HM13-224	ENST00000498035	FBXO31	Q5XUX0	539 aa	Predicted RBP	10.7	□□□□□ -0.7
HM13-224	ENST00000498035	ITPRIP	Q8IWB1	547 aa		10.7	□□□□□ -0.7
HM13-224	ENST00000498035	PDILT	Q8N807	584 aa		10.7	□□□□□ -0.7
HM13-224	ENST00000498035	RTF1	Q92541	710 aa	Known RBP	10.7	□□□□□ -0.7
HM13-224	ENST00000498035	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.7	□□□□□ -0.7
HM13-224	ENST00000498035	TCF3	P15923	654 aa		10.7	□□□□□ -0.7
HM13-224	ENST00000498035	SATB1	Q01826	763 aa		10.7	□□□□□ -0.7
HM13-224	ENST00000498035	SKIV2L	Q15477	1246 aa	Known RBP	10.7	□□□□□ -0.7
HM13-224	ENST00000498035	TESK2	Q96S53	571 aa		10.7	□□□□□ -0.7
HM13-224	ENST00000498035	NOS1	P29475	1434 aa		10.7	□□□□□ -0.7
HM13-224	ENST00000498035	SCAF11	Q99590	1463 aa	Known RBP	10.7	□□□□□ -0.7
HM13-224	ENST00000498035	HMGN5	P82970	282 aa	Known RBP	10.69	□□□□□ -0.7
HM13-224	ENST00000498035	TCP11L2	Q8N4U5	519 aa		10.69	□□□□□ -0.7
HM13-224	ENST00000498035	GNL3L	Q9NVN8	582 aa	Known RBP	10.69	□□□□□ -0.7
HM13-224	ENST00000498035	FBXO9	Q9UK97	447 aa	Predicted RBP	10.69	□□□□□ -0.7
HM13-224	ENST00000498035	SMG6	Q86US8	1419 aa	Known RBP	10.69	□□□□□ -0.7
HM13-224	ENST00000498035	A2M	P01023	1474 aa		10.69	□□□□□ -0.7
HM13-224	ENST00000498035	BECN1	Q14457	450 aa		10.69	□□□□□ -0.7
HM13-224	ENST00000498035	ANKRD23	Q86SG2	305 aa		10.69	□□□□□ -0.7
HM13-224	ENST00000498035	LRRC27	Q9C0I9	530 aa		10.69	□□□□□ -0.7
HM13-224	ENST00000498035	COG6	Q9Y2V7	657 aa		10.69	□□□□□ -0.7
HM13-224	ENST00000498035	ZNF518A	Q6AHZ1	1483 aa		10.69	□□□□□ -0.7
HM13-224	ENST00000498035	ARHGEF12	Q9NZN5	1544 aa		10.69	□□□□□ -0.7
HM13-224	ENST00000498035	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
HM13-224	ENST00000498035	RTEL1-TNFRSF6B	F6WH68	1400 aa		10.68	□□□□□ -0.7
HM13-224	ENST00000498035	hCG_2014768	A0A024R1R8	64 aa		10.68	□□□□□ -0.7
HM13-224	ENST00000498035	SEMA3E	O15041	775 aa		10.68	□□□□□ -0.7
HM13-224	ENST00000498035	TSR1	Q2NL82	804 aa	Known RBP	10.68	□□□□□ -0.7
HM13-224	ENST00000498035	COMMD10	Q9Y6G5	202 aa		10.68	□□□□□ -0.7
HM13-224	ENST00000498035	TXNDC2	Q86VQ3	553 aa		10.68	□□□□□ -0.7
HM13-224	ENST00000498035	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.68	□□□□□ -0.7
HM13-224	ENST00000498035	ELL2	O00472	640 aa	Predicted RBP	10.68	□□□□□ -0.7
HM13-224	ENST00000498035	DPH6	Q7L8W6	267 aa		10.68	□□□□□ -0.7
HM13-224	ENST00000498035	RBM46	Q8TBY0	533 aa	Known RBP	10.68	□□□□□ -0.7
HM13-224	ENST00000498035	CABP1	Q9NZU7	370 aa		10.68	□□□□□ -0.7
HM13-224	ENST00000498035	AMPH	P49418	695 aa		10.67	□□□□□ -0.7
HM13-224	ENST00000498035	RWDD1	Q9H446	243 aa	Predicted RBP	10.67	□□□□□ -0.7
HM13-224	ENST00000498035	SBNO2	Q9Y2G9	1366 aa		10.67	□□□□□ -0.7
HM13-224	ENST00000498035	RIPK4	P57078	832 aa		10.67	□□□□□ -0.7
HM13-224	ENST00000498035	CDK19	Q9BWU1	502 aa		10.67	□□□□□ -0.7
HM13-224	ENST00000498035	FAN1	Q9Y2M0	1017 aa		10.67	□□□□□ -0.7
HM13-224	ENST00000498035	NUTM2G	Q5VZR2	741 aa		10.67	□□□□□ -0.7
HM13-224	ENST00000498035	C14orf93	Q9H972	538 aa	Known RBP	10.67	□□□□□ -0.7
HM13-224	ENST00000498035	UHRF1BP1	Q6BDS2	1440 aa		10.67	□□□□□ -0.7
HM13-224	ENST00000498035	AMOTL1	Q8IY63	956 aa		10.66	□□□□□ -0.7
HM13-224	ENST00000498035	MAF1	Q9H063	256 aa		10.66	□□□□□ -0.7
HM13-224	ENST00000498035	MAP3K20	Q9NYL2	800 aa	Known RBP	10.66	□□□□□ -0.7
HM13-224	ENST00000498035	RAI14	Q9P0K7	980 aa		10.66	□□□□□ -0.7
HM13-224	ENST00000498035	CHPF2	Q9P2E5	772 aa		10.66	□□□□□ -0.7
HM13-224	ENST00000498035	GYS2	P54840	703 aa		10.66	□□□□□ -0.7
HM13-224	ENST00000498035	CENPQ	Q7L2Z9	268 aa	Predicted RBP	10.66	□□□□□ -0.7
HM13-224	ENST00000498035	NSD3	Q9BZ95	1437 aa		10.66	□□□□□ -0.7
HM13-224	ENST00000498035	GEMIN8	Q9NWZ8	242 aa	Known RBP	10.66	□□□□□ -0.7
HM13-224	ENST00000498035	SKAP1	Q86WV1	359 aa		10.65	□□□□□ -0.7
HM13-224	ENST00000498035	C1orf131	Q8NDD1	294 aa	Known RBP	10.65	□□□□□ -0.7
HM13-224	ENST00000498035	PMFBP1	Q8TBY8	1022 aa		10.65	□□□□□ -0.7
HM13-224	ENST00000498035	HMOX1	P09601	288 aa		10.65	□□□□□ -0.7
HM13-224	ENST00000498035	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.65	□□□□□ -0.7
HM13-224	ENST00000498035	ARHGEF5	Q12774	1597 aa		10.65	□□□□□ -0.7
HM13-224	ENST00000498035	CHD1	O14646	1710 aa		10.65	□□□□□ -0.7
HM13-224	ENST00000498035	ZKSCAN8	Q15776	578 aa	Predicted RBP	10.65	□□□□□ -0.7
HM13-224	ENST00000498035	LTV1	Q96GA3	475 aa	Predicted RBP	10.65	□□□□□ -0.7
HM13-224	ENST00000498035	DIS3	Q9Y2L1	958 aa	Known RBP	10.65	□□□□□ -0.7
HM13-224	ENST00000498035	ADGB	Q8N7X0	1667 aa		10.65	□□□□□ -0.7
HM13-224	ENST00000498035	HELB	Q8NG08	1087 aa	Predicted RBP	10.65	□□□□□ -0.71
HM13-224	ENST00000498035	NRBP1	Q9UHY1	535 aa		10.65	□□□□□ -0.71
HM13-224	ENST00000498035	FEZ2	Q9UHY8	353 aa	Predicted RBP	10.65	□□□□□ -0.71
HM13-224	ENST00000498035	PDZRN3	Q9UPQ7	1066 aa		10.65	□□□□□ -0.71
HM13-224	ENST00000498035	EXOC5	O00471	708 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	KLF15	Q9UIH9	416 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	SAMD9L	Q8IVG5	1584 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	DYTN	A2CJ06	578 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	SMAP	O00193	183 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	PDE4A	P27815	886 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	PROSER2	Q86WR7	435 aa	Predicted RBP	10.64	□□□□□ -0.71
HM13-224	ENST00000498035	UBXN4	Q92575	508 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	SPATA31E1	Q6ZUB1	1445 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	ERCC6L2	Q5T890	1561 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035		A6NJR5	290 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	HDGFL1	Q5TGJ6	251 aa		10.64	□□□□□ -0.71
HM13-224	ENST00000498035	WAPL	Q7Z5K2	1190 aa		10.63	□□□□□ -0.71
HM13-224	ENST00000498035	KRI1	Q8N9T8	703 aa	Known RBP	10.63	□□□□□ -0.71
HM13-224	ENST00000498035	ZBTB9	Q96C00	473 aa		10.63	□□□□□ -0.71
HM13-224	ENST00000498035	PER1	O15534	1290 aa	Predicted RBP	10.63	□□□□□ -0.71
HM13-224	ENST00000498035	GTPBP6	O43824	516 aa	Predicted RBP	10.63	□□□□□ -0.71
HM13-224	ENST00000498035	CC2D1A	Q6P1N0	951 aa	Predicted RBP	10.63	□□□□□ -0.71
HM13-224	ENST00000498035	SLC26A8	Q96RN1	970 aa		10.63	□□□□□ -0.71
HM13-224	ENST00000498035	CGN	Q9P2M7	1197 aa	Known RBP	10.63	□□□□□ -0.71
HM13-224	ENST00000498035	IGBP1	P78318	339 aa		10.63	□□□□□ -0.71
HM13-224	ENST00000498035	BIRC2	Q13490	618 aa		10.63	□□□□□ -0.71
HM13-224	ENST00000498035	SF3A1	Q15459	793 aa	Known RBP	10.63	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms