RNA–Protein interactions for RNA: ENST00000497886.5

TSC2-216, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 3,248 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-216ENST00000497886 NCBP3Q53F19 620 aaKnown RBP16.75■□□□□ 0.27
TSC2-216ENST00000497886 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
TSC2-216ENST00000497886 ARHGAP45Q92619 1136 aa16.75■□□□□ 0.27
TSC2-216ENST00000497886 ESPNB1AK53 854 aa16.75■□□□□ 0.27
TSC2-216ENST00000497886 MAP4K4O95819 1239 aaPredicted RBP16.75■□□□□ 0.27
TSC2-216ENST00000497886 CEP85Q6P2H3 762 aa16.75■□□□□ 0.27
TSC2-216ENST00000497886 ARHGEF40Q8TER5 1519 aa16.75■□□□□ 0.27
TSC2-216ENST00000497886 INTS3Q68E01 1043 aaKnown RBP16.74■□□□□ 0.27
TSC2-216ENST00000497886 DCTPP1Q9H773 170 aa16.74■□□□□ 0.27
TSC2-216ENST00000497886 NASPP49321 788 aaPredicted RBP16.74■□□□□ 0.27
TSC2-216ENST00000497886 ANP32BQ92688 251 aaKnown RBP16.74■□□□□ 0.27
TSC2-216ENST00000497886 MPNDQ8N594 471 aa16.73■□□□□ 0.27
TSC2-216ENST00000497886 PRR36Q9H6K5 1346 aa16.73■□□□□ 0.27
TSC2-216ENST00000497886 FKBP5Q13451 457 aaPredicted RBP16.73■□□□□ 0.27
TSC2-216ENST00000497886 DDIT3P35638 169 aa16.72■□□□□ 0.27
TSC2-216ENST00000497886 NEK4P51957 841 aa16.72■□□□□ 0.27
TSC2-216ENST00000497886 LARP6Q9BRS8 491 aaKnown RBP16.72■□□□□ 0.27
TSC2-216ENST00000497886 ACEP12821 1306 aa16.72■□□□□ 0.27
TSC2-216ENST00000497886 AMPHP49418 695 aa16.72■□□□□ 0.27
TSC2-216ENST00000497886 ANKRD44Q8N8A2 993 aa16.72■□□□□ 0.27
TSC2-216ENST00000497886 RNF214Q8ND24 703 aa16.72■□□□□ 0.27
TSC2-216ENST00000497886 USP26Q9BXU7 913 aa16.72■□□□□ 0.27
TSC2-216ENST00000497886 ARID3AQ99856 593 aa16.71■□□□□ 0.27
TSC2-216ENST00000497886 IL1RAPL2Q9NP60 686 aa16.71■□□□□ 0.27
TSC2-216ENST00000497886 CIZ1Q9ULV3 898 aaPredicted RBP16.71■□□□□ 0.27
TSC2-216ENST00000497886 RABEP1Q15276 862 aa16.71■□□□□ 0.27
TSC2-216ENST00000497886 ANO2Q9NQ90 1003 aa16.71■□□□□ 0.27
TSC2-216ENST00000497886 TSPOAP1O95153 1857 aa16.71■□□□□ 0.26
TSC2-216ENST00000497886 UPF3BQ9BZI7 483 aaKnown RBP16.7■□□□□ 0.26
TSC2-216ENST00000497886 TMEM131LA2VDJ0 1609 aa16.7■□□□□ 0.26
TSC2-216ENST00000497886 PTCH1Q13635 1447 aa16.7■□□□□ 0.26
TSC2-216ENST00000497886 ST18O60284 1047 aa16.7■□□□□ 0.26
TSC2-216ENST00000497886 NGDNQ8NEJ9 315 aaKnown RBP16.7■□□□□ 0.26
TSC2-216ENST00000497886 CPS1P31327 1500 aa16.7■□□□□ 0.26
TSC2-216ENST00000497886 CEBPAP49715 358 aaPredicted RBP16.7■□□□□ 0.26
TSC2-216ENST00000497886 MTHFSDQ2M296 383 aaKnown RBP16.69■□□□□ 0.26
TSC2-216ENST00000497886 USHBP1Q8N6Y0 703 aa16.69■□□□□ 0.26
TSC2-216ENST00000497886 RBM33Q96EV2 1170 aaKnown RBP16.69■□□□□ 0.26
TSC2-216ENST00000497886 SKOR2Q2VWA4 1001 aaPredicted RBP16.69■□□□□ 0.26
TSC2-216ENST00000497886 GDPD2Q9HCC8 539 aa16.68■□□□□ 0.26
TSC2-216ENST00000497886 CFAP74Q9C0B2 1584 aa16.68■□□□□ 0.26
TSC2-216ENST00000497886 EIF2S2P20042 333 aaKnown RBP16.68■□□□□ 0.26
TSC2-216ENST00000497886 STK31Q9BXU1 1019 aa16.68■□□□□ 0.26
TSC2-216ENST00000497886 EDC4Q6P2E9 1401 aaKnown RBP16.68■□□□□ 0.26
TSC2-216ENST00000497886 PREX1Q8TCU6 1659 aa16.68■□□□□ 0.26
TSC2-216ENST00000497886 MED14O60244 1454 aa16.68■□□□□ 0.26
TSC2-216ENST00000497886 ZMYND15Q9H091 742 aa16.68■□□□□ 0.26
TSC2-216ENST00000497886 CLCN1P35523 988 aa16.67■□□□□ 0.26
TSC2-216ENST00000497886 ARHGAP31Q2M1Z3 1444 aa16.67■□□□□ 0.26
TSC2-216ENST00000497886 TTC21BQ7Z4L5 1316 aa16.67■□□□□ 0.26
TSC2-216ENST00000497886 NEO1Q92859 1461 aa16.67■□□□□ 0.26
TSC2-216ENST00000497886 BRPF1P55201 1214 aaPredicted RBP16.66■□□□□ 0.26
TSC2-216ENST00000497886 RPAP2Q8IXW5 612 aaPredicted RBP16.66■□□□□ 0.26
TSC2-216ENST00000497886 KIF20BQ96Q89 1820 aa16.66■□□□□ 0.26
TSC2-216ENST00000497886 NCOA3Q9Y6Q9 1424 aa16.66■□□□□ 0.26
TSC2-216ENST00000497886 RTL1A6NKG5 1358 aa16.66■□□□□ 0.26
TSC2-216ENST00000497886 HMMRO75330 724 aa16.66■□□□□ 0.26
TSC2-216ENST00000497886 NUTM1Q86Y26 1132 aa16.66■□□□□ 0.26
TSC2-216ENST00000497886 MAP3K19Q56UN5 1328 aa16.66■□□□□ 0.26
TSC2-216ENST00000497886 CHL1O00533 1208 aa16.65■□□□□ 0.26
TSC2-216ENST00000497886 PNMA6EA0A0J9YXQ4 647 aa16.65■□□□□ 0.26
TSC2-216ENST00000497886 SYCE3A1L190 88 aa16.65■□□□□ 0.26
TSC2-216ENST00000497886 ERC2O15083 957 aa16.65■□□□□ 0.26
TSC2-216ENST00000497886 REC8O95072 547 aa16.65■□□□□ 0.26
TSC2-216ENST00000497886 GLIPR1L2Q4G1C9 344 aa16.65■□□□□ 0.26
TSC2-216ENST00000497886 NSFL1CQ9UNZ2 370 aaKnown RBP16.64■□□□□ 0.26
TSC2-216ENST00000497886 PDE1AP54750 535 aa16.64■□□□□ 0.25
TSC2-216ENST00000497886 PALD1Q9ULE6 856 aa16.64■□□□□ 0.25
TSC2-216ENST00000497886 ANXA1P04083 346 aa16.64■□□□□ 0.25
TSC2-216ENST00000497886 PRIM1P49642 420 aaKnown RBP16.64■□□□□ 0.25
TSC2-216ENST00000497886 NUCB2P80303 420 aa16.64■□□□□ 0.25
TSC2-216ENST00000497886 ZSCAN23Q3MJ62 389 aa16.64■□□□□ 0.25
TSC2-216ENST00000497886 A2ML1A8K2U0 1454 aa16.63■□□□□ 0.25
TSC2-216ENST00000497886 MSNP26038 577 aaKnown RBP16.63■□□□□ 0.25
TSC2-216ENST00000497886 LRRFIP2Q9Y608 721 aaKnown RBP16.63■□□□□ 0.25
TSC2-216ENST00000497886 DDX54Q8TDD1 881 aaKnown RBP16.63■□□□□ 0.25
TSC2-216ENST00000497886 NLRP6P59044 892 aa16.62■□□□□ 0.25
TSC2-216ENST00000497886 ATP7BP35670 1465 aa16.62■□□□□ 0.25
TSC2-216ENST00000497886 GNAI2P04899 355 aa16.62■□□□□ 0.25
TSC2-216ENST00000497886 KLHL40Q2TBA0 621 aa16.62■□□□□ 0.25
TSC2-216ENST00000497886 RBSNQ9H1K0 784 aa16.62■□□□□ 0.25
TSC2-216ENST00000497886 PIK3R4Q99570 1358 aa16.62■□□□□ 0.25
TSC2-216ENST00000497886 UNC5CLQ8IV45 518 aa16.62■□□□□ 0.25
TSC2-216ENST00000497886 DLG5Q8TDM6 1919 aa16.61■□□□□ 0.25
TSC2-216ENST00000497886 ROBO2Q9HCK4 1378 aa16.61■□□□□ 0.25
TSC2-216ENST00000497886 ANKRD26Q9UPS8 1709 aa16.61■□□□□ 0.25
TSC2-216ENST00000497886 LMBRD1Q9NUN5 540 aa16.61■□□□□ 0.25
TSC2-216ENST00000497886 TMX3Q96JJ7 454 aa16.6■□□□□ 0.25
TSC2-216ENST00000497886 EYA1Q99502 592 aa16.6■□□□□ 0.25
TSC2-216ENST00000497886 ATP10DQ9P241 1426 aa16.6■□□□□ 0.25
TSC2-216ENST00000497886 CDK12Q9NYV4 1490 aaPredicted RBP16.6■□□□□ 0.25
TSC2-216ENST00000497886 PLCB2Q00722 1185 aa16.6■□□□□ 0.25
TSC2-216ENST00000497886 CPSF1Q10570 1443 aaKnown RBP16.6■□□□□ 0.25
TSC2-216ENST00000497886 FLIIQ13045 1269 aa16.6■□□□□ 0.25
TSC2-216ENST00000497886 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
TSC2-216ENST00000497886 KNDC1Q76NI1 1749 aa16.6■□□□□ 0.25
TSC2-216ENST00000497886 GPT2Q8TD30 523 aa16.6■□□□□ 0.25
TSC2-216ENST00000497886 MX1P20591 662 aa16.59■□□□□ 0.25
TSC2-216ENST00000497886 HAP1P54257 671 aaPredicted RBP16.59■□□□□ 0.25
TSC2-216ENST00000497886 HSP90AA2PQ14568 343 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms