RNA–Protein interactions for RNA: ENST00000497282.1

EFNA1-205, Transcript of ephrin A1, human

TSL 2

Gene EFNA1, Length 719 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EFNA1-205	ENST00000497282	EXOC5	O00471	708 aa		10.86	□□□□□ -0.67
EFNA1-205	ENST00000497282	DIAPH1	O60610	1272 aa	Known RBP	10.86	□□□□□ -0.67
EFNA1-205	ENST00000497282	RAPGEF4	Q8WZA2	1011 aa		10.86	□□□□□ -0.67
EFNA1-205	ENST00000497282	TAT	P17735	454 aa	Predicted RBP	10.85	□□□□□ -0.67
EFNA1-205	ENST00000497282	RALBP1	Q15311	655 aa		10.85	□□□□□ -0.67
EFNA1-205	ENST00000497282	PRKRIP1	Q9H875	184 aa	Predicted RBP	10.85	□□□□□ -0.67
EFNA1-205	ENST00000497282	MYBBP1A	Q9BQG0	1328 aa	Known RBP	10.84	□□□□□ -0.67
EFNA1-205	ENST00000497282	SULT6B1	Q6IMI4	303 aa		10.84	□□□□□ -0.67
EFNA1-205	ENST00000497282	FAM196A	Q6ZSG2	479 aa		10.84	□□□□□ -0.67
EFNA1-205	ENST00000497282	ZCRB1	Q8TBF4	217 aa	Known RBP	10.84	□□□□□ -0.67
EFNA1-205	ENST00000497282	PLEKHG2	Q9H7P9	1386 aa		10.84	□□□□□ -0.67
EFNA1-205	ENST00000497282	BTAF1	O14981	1849 aa		10.84	□□□□□ -0.67
EFNA1-205	ENST00000497282	RGPD3	A6NKT7	1758 aa	Predicted RBP	10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	RGPD4	Q7Z3J3	1758 aa		10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	RREB1	Q92766	1687 aa		10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	HMOX1	P09601	288 aa		10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	PTF1A	Q7RTS3	328 aa		10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	DDX54	Q8TDD1	881 aa	Known RBP	10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	CFAP53	Q96M91	514 aa		10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	PCDH11X	Q9BZA7	1347 aa		10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	PCDH11Y	Q9BZA8	1340 aa		10.83	□□□□□ -0.68
EFNA1-205	ENST00000497282	ITGB4	P16144	1822 aa		10.82	□□□□□ -0.68
EFNA1-205	ENST00000497282	VIRMA	Q69YN4	1812 aa	Known RBP	10.82	□□□□□ -0.68
EFNA1-205	ENST00000497282	U2SURP	O15042	1029 aa	Known RBP	10.82	□□□□□ -0.68
EFNA1-205	ENST00000497282	CYP27B1	O15528	508 aa		10.82	□□□□□ -0.68
EFNA1-205	ENST00000497282	TRIM37	O94972	964 aa		10.82	□□□□□ -0.68
EFNA1-205	ENST00000497282	EP400	Q96L91	3159 aa		10.82	□□□□□ -0.68
EFNA1-205	ENST00000497282	ADAMTS7	Q9UKP4	1686 aa		10.81	□□□□□ -0.68
EFNA1-205	ENST00000497282	NUP188	Q5SRE5	1749 aa		10.81	□□□□□ -0.68
EFNA1-205	ENST00000497282	KCNQ2	O43526	872 aa		10.8	□□□□□ -0.68
EFNA1-205	ENST00000497282	DEFB132	Q7Z7B7	95 aa		10.8	□□□□□ -0.68
EFNA1-205	ENST00000497282	ACSBG1	Q96GR2	724 aa		10.8	□□□□□ -0.68
EFNA1-205	ENST00000497282	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	10.8	□□□□□ -0.68
EFNA1-205	ENST00000497282	KDM6A	O15550	1401 aa	Predicted RBP	10.8	□□□□□ -0.68
EFNA1-205	ENST00000497282	SCN11A	Q9UI33	1791 aa		10.8	□□□□□ -0.68
EFNA1-205	ENST00000497282	PHKG2	P15735	406 aa		10.79	□□□□□ -0.68
EFNA1-205	ENST00000497282	CCDC125	Q86Z20	511 aa		10.79	□□□□□ -0.68
EFNA1-205	ENST00000497282	RSPH6A	Q9H0K4	717 aa		10.79	□□□□□ -0.68
EFNA1-205	ENST00000497282	SPG7	Q9UQ90	795 aa		10.79	□□□□□ -0.68
EFNA1-205	ENST00000497282	LY75	O60449	1722 aa		10.78	□□□□□ -0.68
EFNA1-205	ENST00000497282	U2AF1L5	P0DN76	240 aa	Predicted RBP	10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	PRKAR2B	P31323	418 aa		10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	U2AF1	Q01081	240 aa	Known RBP eCLIP	10.77	□□□□□ -0.69	2e-7	■□□□□ 10
EFNA1-205	ENST00000497282	NKX1-1	Q15270	411 aa	Predicted RBP	10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	CCDC184	Q52MB2	194 aa		10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	BCL11B	Q9C0K0	894 aa	Predicted RBP	10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	NUDC	Q9Y266	331 aa		10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	DLG5	Q8TDM6	1919 aa		10.77	□□□□□ -0.69
EFNA1-205	ENST00000497282	MRC1	P22897	1456 aa		10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	APBA3	O96018	575 aa		10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	BAG6	P46379	1132 aa		10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	PRIM1	P49642	420 aa	Known RBP	10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	EN1	Q05925	392 aa	Predicted RBP	10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	SF3B2	Q13435	895 aa	Known RBP	10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	MTHFSD	Q2M296	383 aa	Known RBP	10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	AMOT	Q4VCS5	1084 aa		10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	IFNL2	Q8IZJ0	200 aa		10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	PHACTR3	Q96KR7	559 aa		10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	PAPPA	Q13219	1627 aa		10.76	□□□□□ -0.69
EFNA1-205	ENST00000497282	SIPA1L3	O60292	1781 aa	Predicted RBP	10.75	□□□□□ -0.69
EFNA1-205	ENST00000497282	ANP32C	O43423	234 aa		10.75	□□□□□ -0.69
EFNA1-205	ENST00000497282	EZH2	Q15910	746 aa	Known RBP	10.75	□□□□□ -0.69
EFNA1-205	ENST00000497282	CAMKK2	Q96RR4	588 aa		10.75	□□□□□ -0.69
EFNA1-205	ENST00000497282	FCHSD2	O94868	740 aa		10.74	□□□□□ -0.69
EFNA1-205	ENST00000497282	SYTL4	Q96C24	671 aa	Predicted RBP	10.74	□□□□□ -0.69
EFNA1-205	ENST00000497282	PLEKHF1	Q96S99	279 aa		10.74	□□□□□ -0.69
EFNA1-205	ENST00000497282	KAT6B	Q8WYB5	2073 aa		10.73	□□□□□ -0.69
EFNA1-205	ENST00000497282	AKAP4	Q5JQC9	854 aa		10.73	□□□□□ -0.69
EFNA1-205	ENST00000497282	C1orf141	Q5JVX7	400 aa		10.73	□□□□□ -0.69
EFNA1-205	ENST00000497282	MPRIP	Q6WCQ1	1025 aa		10.73	□□□□□ -0.69
EFNA1-205	ENST00000497282	DCAF5	Q96JK2	942 aa		10.73	□□□□□ -0.69
EFNA1-205	ENST00000497282	MAP3K5	Q99683	1374 aa		10.73	□□□□□ -0.69
EFNA1-205	ENST00000497282	C5	P01031	1676 aa		10.73	□□□□□ -0.69
EFNA1-205	ENST00000497282	PLSCR1	O15162	318 aa		10.72	□□□□□ -0.69
EFNA1-205	ENST00000497282	TAF1L	Q8IZX4	1826 aa		10.72	□□□□□ -0.69
EFNA1-205	ENST00000497282	HSP90AB1	P08238	724 aa	Known RBP	10.71	□□□□□ -0.69
EFNA1-205	ENST00000497282	UBR2	Q8IWV8	1755 aa		10.71	□□□□□ -0.69
EFNA1-205	ENST00000497282	PROM2	Q8N271	834 aa		10.71	□□□□□ -0.69
EFNA1-205	ENST00000497282	GAS2L2	Q8NHY3	880 aa		10.71	□□□□□ -0.69
EFNA1-205	ENST00000497282	PIGB	Q92521	554 aa		10.71	□□□□□ -0.69
EFNA1-205	ENST00000497282	LGR6	Q9HBX8	967 aa		10.71	□□□□□ -0.69
EFNA1-205	ENST00000497282	TUBGCP6	Q96RT7	1819 aa		10.7	□□□□□ -0.7
EFNA1-205	ENST00000497282	CIC	Q96RK0	1608 aa	Predicted RBP	10.7	□□□□□ -0.7
EFNA1-205	ENST00000497282	PALLD	Q8WX93	1383 aa		10.7	□□□□□ -0.7
EFNA1-205	ENST00000497282	RNMT	O43148	476 aa	Known RBP	10.7	□□□□□ -0.7
EFNA1-205	ENST00000497282	WDR43	Q15061	677 aa	Known RBP eCLIP	10.7	□□□□□ -0.7
EFNA1-205	ENST00000497282	TMOD3	Q9NYL9	352 aa		10.7	□□□□□ -0.7
EFNA1-205	ENST00000497282	TJP1	Q07157	1748 aa		10.7	□□□□□ -0.7
EFNA1-205	ENST00000497282	ZNF831	Q5JPB2	1677 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	CEMIP	Q8WUJ3	1361 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	GNAT3	A8MTJ3	354 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	ERVV-2	B6SEH9	535 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	TXNRD1	Q16881	649 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	CCDC146	Q8IYE0	955 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	IL17RE	Q8NFR9	667 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	MRS2	Q9HD23	443 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	LRRC4B	Q9NT99	713 aa		10.69	□□□□□ -0.7
EFNA1-205	ENST00000497282	ADAMTS8	Q9UP79	889 aa		10.69	□□□□□ -0.7

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