RNA–Protein interactions for RNA: ENST00000496827.1

SEC24C-205, Transcript of SEC24 homolog C, COPII coat complex component, humanhuman

TSL 3

Gene SEC24C, Length 948 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24C-205ENST00000496827 BAG6P46379 1132 aa16.48■□□□□ 0.23
SEC24C-205ENST00000496827 RALBP1Q15311 655 aa16.48■□□□□ 0.23
SEC24C-205ENST00000496827 SULT6B1Q6IMI4 303 aa16.48■□□□□ 0.23
SEC24C-205ENST00000496827 SPG7Q9UQ90 795 aa16.48■□□□□ 0.23
SEC24C-205ENST00000496827 DEFB132Q7Z7B7 95 aa16.47■□□□□ 0.23
SEC24C-205ENST00000496827 PCDH11XQ9BZA7 1347 aa16.46■□□□□ 0.23
SEC24C-205ENST00000496827 PCDH11YQ9BZA8 1340 aa16.46■□□□□ 0.23
SEC24C-205ENST00000496827 APBA3O96018 575 aa16.46■□□□□ 0.23
SEC24C-205ENST00000496827 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
SEC24C-205ENST00000496827 ACSBG1Q96GR2 724 aa16.46■□□□□ 0.23
SEC24C-205ENST00000496827 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.46■□□□□ 0.231e-6■■■□□ 16.8
SEC24C-205ENST00000496827 RGPD1P0DJD0 1748 aa16.45■□□□□ 0.22
SEC24C-205ENST00000496827 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
SEC24C-205ENST00000496827 BCL11BQ9C0K0 894 aaPredicted RBP16.45■□□□□ 0.22
SEC24C-205ENST00000496827 COL3A1P02461 1466 aaPredicted RBP16.44■□□□□ 0.22
SEC24C-205ENST00000496827 HMOX1P09601 288 aa16.44■□□□□ 0.22
SEC24C-205ENST00000496827 PLEKHO1Q53GL0 409 aaPredicted RBP16.44■□□□□ 0.22
SEC24C-205ENST00000496827 NUDCQ9Y266 331 aa16.44■□□□□ 0.22
SEC24C-205ENST00000496827 KDRP35968 1356 aa16.43■□□□□ 0.22
SEC24C-205ENST00000496827 CYP27B1O15528 508 aa16.43■□□□□ 0.22
SEC24C-205ENST00000496827 KCNQ2O43526 872 aa16.43■□□□□ 0.22
SEC24C-205ENST00000496827 EN1Q05925 392 aaPredicted RBP16.43■□□□□ 0.22
SEC24C-205ENST00000496827 PLEKHG2Q9H7P9 1386 aa16.42■□□□□ 0.22
SEC24C-205ENST00000496827 AMOTQ4VCS5 1084 aa16.42■□□□□ 0.22
SEC24C-205ENST00000496827 PTF1AQ7RTS3 328 aa16.42■□□□□ 0.22
SEC24C-205ENST00000496827 SHANK3Q9BYB0 1731 aa16.42■□□□□ 0.22
SEC24C-205ENST00000496827 SBF2Q86WG5 1849 aa16.41■□□□□ 0.22
SEC24C-205ENST00000496827 IFNL2Q8IZJ0 200 aa16.41■□□□□ 0.22
SEC24C-205ENST00000496827 TNS1Q9HBL0 1735 aaKnown RBP16.41■□□□□ 0.22
SEC24C-205ENST00000496827 MYBBP1AQ9BQG0 1328 aaKnown RBP16.41■□□□□ 0.22
SEC24C-205ENST00000496827 PKD1L3Q7Z443 1732 aa16.4■□□□□ 0.22
SEC24C-205ENST00000496827 PRIM1P49642 420 aaKnown RBP16.4■□□□□ 0.22
SEC24C-205ENST00000496827 SYTL4Q96C24 671 aaPredicted RBP16.4■□□□□ 0.22
SEC24C-205ENST00000496827 PRKRIP1Q9H875 184 aaPredicted RBP16.4■□□□□ 0.22
SEC24C-205ENST00000496827 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
SEC24C-205ENST00000496827 PHKG2P15735 406 aa16.39■□□□□ 0.21
SEC24C-205ENST00000496827 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
SEC24C-205ENST00000496827 EZH2Q15910 746 aaKnown RBP16.39■□□□□ 0.21
SEC24C-205ENST00000496827 CAMKK2Q96RR4 588 aa16.39■□□□□ 0.21
SEC24C-205ENST00000496827 PLSCR1O15162 318 aa16.38■□□□□ 0.21
SEC24C-205ENST00000496827 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
SEC24C-205ENST00000496827 ZNF530Q6P9A1 599 aaPredicted RBP16.38■□□□□ 0.21
SEC24C-205ENST00000496827 C1orf141Q5JVX7 400 aa16.37■□□□□ 0.21
SEC24C-205ENST00000496827 NHSQ6T4R5 1651 aa16.37■□□□□ 0.21
SEC24C-205ENST00000496827 HSP90AB1P08238 724 aaKnown RBP16.36■□□□□ 0.21
SEC24C-205ENST00000496827 KAT6BQ8WYB5 2073 aa16.36■□□□□ 0.21
SEC24C-205ENST00000496827 DOT1LQ8TEK3 1739 aa16.34■□□□□ 0.21
SEC24C-205ENST00000496827 FCHSD2O94868 740 aa16.34■□□□□ 0.21
SEC24C-205ENST00000496827 PRKAR2BP31323 418 aa16.34■□□□□ 0.21
SEC24C-205ENST00000496827 MPRIPQ6WCQ1 1025 aa16.34■□□□□ 0.21
SEC24C-205ENST00000496827 DCAF5Q96JK2 942 aa16.34■□□□□ 0.21
SEC24C-205ENST00000496827 RSPH6AQ9H0K4 717 aa16.34■□□□□ 0.21
SEC24C-205ENST00000496827 ANP32CO43423 234 aa16.33■□□□□ 0.2
SEC24C-205ENST00000496827 MTHFSDQ2M296 383 aaKnown RBP16.33■□□□□ 0.2
SEC24C-205ENST00000496827 AKAP4Q5JQC9 854 aa16.33■□□□□ 0.2
SEC24C-205ENST00000496827 TXNRD1Q16881 649 aa16.32■□□□□ 0.2
SEC24C-205ENST00000496827 BTAF1O14981 1849 aa16.31■□□□□ 0.2
SEC24C-205ENST00000496827 ERVV-2B6SEH9 535 aa16.31■□□□□ 0.2
SEC24C-205ENST00000496827 PROM2Q8N271 834 aa16.31■□□□□ 0.2
SEC24C-205ENST00000496827 GAS2L2Q8NHY3 880 aa16.31■□□□□ 0.2
SEC24C-205ENST00000496827 PHACTR3Q96KR7 559 aa16.31■□□□□ 0.2
SEC24C-205ENST00000496827 TMOD3Q9NYL9 352 aa16.31■□□□□ 0.2
SEC24C-205ENST00000496827 NEFMP07197 916 aa16.3■□□□□ 0.2
SEC24C-205ENST00000496827 PIGBQ92521 554 aa16.3■□□□□ 0.2
SEC24C-205ENST00000496827 EP400Q96L91 3159 aa16.3■□□□□ 0.2
SEC24C-205ENST00000496827 TOGARAM1Q9Y4F4 1720 aa16.29■□□□□ 0.2
SEC24C-205ENST00000496827 CABP4P57796 275 aa16.29■□□□□ 0.2
SEC24C-205ENST00000496827 NBPF14Q5TI25 921 aa16.29■□□□□ 0.2
SEC24C-205ENST00000496827 PNNQ9H307 717 aaKnown RBP16.29■□□□□ 0.2
SEC24C-205ENST00000496827 KDM6AO15550 1401 aaPredicted RBP16.28■□□□□ 0.2
SEC24C-205ENST00000496827 RGPD3A6NKT7 1758 aaPredicted RBP16.28■□□□□ 0.2
SEC24C-205ENST00000496827 RGPD4Q7Z3J3 1758 aa16.28■□□□□ 0.2
SEC24C-205ENST00000496827 WDR43Q15061 677 aaKnown RBP eCLIP16.27■□□□□ 0.2
SEC24C-205ENST00000496827 SMARCC1Q92922 1105 aaPredicted RBP16.27■□□□□ 0.2
SEC24C-205ENST00000496827 LGR6Q9HBX8 967 aa16.27■□□□□ 0.2
SEC24C-205ENST00000496827 RREB1Q92766 1687 aa16.27■□□□□ 0.19
SEC24C-205ENST00000496827 ITGB4P16144 1822 aa16.26■□□□□ 0.19
SEC24C-205ENST00000496827 GNAT3A8MTJ3 354 aa16.26■□□□□ 0.19
SEC24C-205ENST00000496827 RNMTO43148 476 aaKnown RBP16.26■□□□□ 0.19
SEC24C-205ENST00000496827 SLC27A3Q5K4L6 730 aa16.26■□□□□ 0.19
SEC24C-205ENST00000496827 NFATC2IPQ8NCF5 419 aa16.26■□□□□ 0.19
SEC24C-205ENST00000496827 PALLDQ8WX93 1383 aa16.26■□□□□ 0.19
SEC24C-205ENST00000496827 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
SEC24C-205ENST00000496827 PLEKHF1Q96S99 279 aa16.25■□□□□ 0.19
SEC24C-205ENST00000496827 MAPK8IP3Q9UPT6 1336 aa16.24■□□□□ 0.19
SEC24C-205ENST00000496827 LRRC4BQ9NT99 713 aa16.24■□□□□ 0.19
SEC24C-205ENST00000496827 CCNL1Q9UK58 526 aaPredicted RBP16.24■□□□□ 0.19
SEC24C-205ENST00000496827 ASAP1Q9ULH1 1129 aa16.24■□□□□ 0.19
SEC24C-205ENST00000496827 NUP188Q5SRE5 1749 aa16.24■□□□□ 0.19
SEC24C-205ENST00000496827 PSDA5PKW4 1024 aaPredicted RBP16.23■□□□□ 0.19
SEC24C-205ENST00000496827 KCNQ4P56696 695 aa16.23■□□□□ 0.19
SEC24C-205ENST00000496827 R3HDM1Q15032 1099 aaKnown RBP16.23■□□□□ 0.19
SEC24C-205ENST00000496827 SLC52A2Q9HAB3 445 aa16.23■□□□□ 0.19
SEC24C-205ENST00000496827 ATG3Q9NT62 314 aa16.23■□□□□ 0.19
SEC24C-205ENST00000496827 STK32BQ9NY57 414 aa16.23■□□□□ 0.19
SEC24C-205ENST00000496827 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
SEC24C-205ENST00000496827 RTF1Q92541 710 aaKnown RBP16.22■□□□□ 0.19
SEC24C-205ENST00000496827 ADAMTS8Q9UP79 889 aa16.22■□□□□ 0.19
SEC24C-205ENST00000496827 SCN11AQ9UI33 1791 aa16.21■□□□□ 0.19
SEC24C-205ENST00000496827 HMGB2P26583 209 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms