RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 NUTM2EB1AL46 878 aaPredicted RBP21.96■■□□□ 1.11
LMNA-216ENST00000496738 NUTM2AQ8IVF1 878 aaPredicted RBP21.96■■□□□ 1.11
LMNA-216ENST00000496738 FAM208AQ9UK61 1670 aaKnown RBP21.96■■□□□ 1.11
LMNA-216ENST00000496738 ADAMTS2O95450 1211 aa21.95■■□□□ 1.1
LMNA-216ENST00000496738 RTF1Q92541 710 aaKnown RBP21.94■■□□□ 1.1
LMNA-216ENST00000496738 TOM1L2Q6ZVM7 507 aa21.94■■□□□ 1.1
LMNA-216ENST00000496738 WDR17Q8IZU2 1322 aa21.93■■□□□ 1.1
LMNA-216ENST00000496738 BTG4Q9NY30 223 aa21.93■■□□□ 1.1
LMNA-216ENST00000496738 EVA1CP58658 441 aa21.92■■□□□ 1.1
LMNA-216ENST00000496738 CALD1Q05682 793 aaKnown RBP21.92■■□□□ 1.1
LMNA-216ENST00000496738 MAP3K5Q99683 1374 aa21.92■■□□□ 1.1
LMNA-216ENST00000496738 GNAT3A8MTJ3 354 aa21.92■■□□□ 1.1
LMNA-216ENST00000496738 EXOSC9Q06265 439 aaKnown RBP21.92■■□□□ 1.1
LMNA-216ENST00000496738 RAPGEF4Q8WZA2 1011 aa21.92■■□□□ 1.1
LMNA-216ENST00000496738 ZNF530Q6P9A1 599 aaPredicted RBP21.91■■□□□ 1.1
LMNA-216ENST00000496738 LARP1Q6PKG0 1096 aaKnown RBP21.91■■□□□ 1.1
LMNA-216ENST00000496738 MEGF6O75095 1541 aa21.91■■□□□ 1.1
LMNA-216ENST00000496738 PLEKHO1Q53GL0 409 aaPredicted RBP21.91■■□□□ 1.1
LMNA-216ENST00000496738 RNF123Q5XPI4 1314 aa21.91■■□□□ 1.1
LMNA-216ENST00000496738 RRP1P56182 461 aaKnown RBP21.9■■□□□ 1.1
LMNA-216ENST00000496738 IFT57Q9NWB7 429 aa21.9■■□□□ 1.1
LMNA-216ENST00000496738 PLIN1O60240 522 aa21.9■■□□□ 1.1
LMNA-216ENST00000496738 GNAI1P63096 354 aa21.9■■□□□ 1.1
LMNA-216ENST00000496738 MBIPQ9NS73 344 aa21.9■■□□□ 1.1
LMNA-216ENST00000496738 COL14A1Q05707 1796 aaKnown RBP21.9■■□□□ 1.1
LMNA-216ENST00000496738 USP35Q9P2H5 1018 aa21.89■■□□□ 1.09
LMNA-216ENST00000496738 TATP17735 454 aaPredicted RBP21.88■■□□□ 1.09
LMNA-216ENST00000496738 CFAP44Q96MT7 982 aa21.88■■□□□ 1.09
LMNA-216ENST00000496738 ZNF853P0CG23 659 aa21.88■■□□□ 1.09
LMNA-216ENST00000496738 AMOTQ4VCS5 1084 aa21.88■■□□□ 1.09
LMNA-216ENST00000496738 CRB1P82279 1406 aa21.87■■□□□ 1.09
LMNA-216ENST00000496738 BCAR3O75815 825 aa21.87■■□□□ 1.09
LMNA-216ENST00000496738 MIS18AQ9NYP9 233 aa21.87■■□□□ 1.09
LMNA-216ENST00000496738 IL17REQ8NFR9 667 aa21.87■■□□□ 1.09
LMNA-216ENST00000496738 BCL2L13Q9BXK5 485 aa21.86■■□□□ 1.09
LMNA-216ENST00000496738 C1orf141Q5JVX7 400 aa21.85■■□□□ 1.09
LMNA-216ENST00000496738 PLCH1Q4KWH8 1693 aa21.85■■□□□ 1.09
LMNA-216ENST00000496738 HTATSF1O43719 755 aaKnown RBP21.85■■□□□ 1.09
LMNA-216ENST00000496738 AKAP4Q5JQC9 854 aa21.85■■□□□ 1.09
LMNA-216ENST00000496738 MPRIPQ6WCQ1 1025 aa21.85■■□□□ 1.09
LMNA-216ENST00000496738 LGR6Q9HBX8 967 aa21.85■■□□□ 1.09
LMNA-216ENST00000496738 LRRC37A3O60309 1634 aa21.84■■□□□ 1.09
LMNA-216ENST00000496738 JCADQ9P266 1359 aa21.84■■□□□ 1.09
LMNA-216ENST00000496738 CARD10Q9BWT7 1032 aa21.84■■□□□ 1.09
LMNA-216ENST00000496738 ELL2O00472 640 aaPredicted RBP21.83■■□□□ 1.09
LMNA-216ENST00000496738 HSPA1LP34931 641 aa21.83■■□□□ 1.09
LMNA-216ENST00000496738 CHL1O00533 1208 aa21.82■■□□□ 1.08
LMNA-216ENST00000496738 RARSP54136 660 aaKnown RBP21.82■■□□□ 1.08
LMNA-216ENST00000496738 TSPYL6Q8N831 410 aa21.81■■□□□ 1.08
LMNA-216ENST00000496738 SPG7Q9UQ90 795 aa21.81■■□□□ 1.08
LMNA-216ENST00000496738 KRT24Q2M2I5 525 aa21.8■■□□□ 1.08
LMNA-216ENST00000496738 TSPYL4Q9UJ04 414 aa21.8■■□□□ 1.08
LMNA-216ENST00000496738 OVOS2A0A0G2JMS6 1433 aa21.8■■□□□ 1.08
LMNA-216ENST00000496738 C8orf58Q8NAV2 365 aa21.8■■□□□ 1.08
LMNA-216ENST00000496738 PARP4Q9UKK3 1724 aaKnown RBP21.8■■□□□ 1.08
LMNA-216ENST00000496738 IL2RBP14784 551 aa21.79■■□□□ 1.08
LMNA-216ENST00000496738 C20orf194Q5TEA3 1177 aa21.79■■□□□ 1.08
LMNA-216ENST00000496738 PKD1L3Q7Z443 1732 aa21.79■■□□□ 1.08
LMNA-216ENST00000496738 CEMIPQ8WUJ3 1361 aa21.78■■□□□ 1.08
LMNA-216ENST00000496738 RNMTO43148 476 aaKnown RBP21.78■■□□□ 1.08
LMNA-216ENST00000496738 FRAT1Q92837 279 aaPredicted RBP21.78■■□□□ 1.08
LMNA-216ENST00000496738 PHKG2P15735 406 aa21.77■■□□□ 1.08
LMNA-216ENST00000496738 VIRMAQ69YN4 1812 aaKnown RBP21.77■■□□□ 1.08
LMNA-216ENST00000496738 CYP27B1O15528 508 aa21.77■■□□□ 1.08
LMNA-216ENST00000496738 C8orf37Q96NL8 207 aa21.77■■□□□ 1.08
LMNA-216ENST00000496738 NRAPQ86VF7 1730 aa21.76■■□□□ 1.07
LMNA-216ENST00000496738 CT47B1P0C2W7 299 aaPredicted RBP21.76■■□□□ 1.07
LMNA-216ENST00000496738 TWISTNBQ3B726 338 aaPredicted RBP21.76■■□□□ 1.07
LMNA-216ENST00000496738 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.76■■□□□ 1.07
LMNA-216ENST00000496738 TCERG1O14776 1098 aaKnown RBP21.76■■□□□ 1.07
LMNA-216ENST00000496738 CANXP27824 592 aaKnown RBP21.76■■□□□ 1.07
LMNA-216ENST00000496738 TEFQ10587 303 aa21.76■■□□□ 1.07
LMNA-216ENST00000496738 TAF7Q15545 349 aaPredicted RBP21.76■■□□□ 1.07
LMNA-216ENST00000496738 SMC4Q9NTJ3 1288 aa21.76■■□□□ 1.07
LMNA-216ENST00000496738 LRP6O75581 1613 aa21.75■■□□□ 1.07
LMNA-216ENST00000496738 IFNL2Q8IZJ0 200 aa21.75■■□□□ 1.07
LMNA-216ENST00000496738 SSH1Q8WYL5 1049 aa21.75■■□□□ 1.07
LMNA-216ENST00000496738 VAMP4O75379 141 aa21.75■■□□□ 1.07
LMNA-216ENST00000496738 ZCRB1Q8TBF4 217 aaKnown RBP21.75■■□□□ 1.07
LMNA-216ENST00000496738 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.74■■□□□ 1.07
LMNA-216ENST00000496738 KDM6AO15550 1401 aaPredicted RBP21.74■■□□□ 1.07
LMNA-216ENST00000496738 EXOC6Q8TAG9 804 aa21.72■■□□□ 1.07
LMNA-216ENST00000496738 DDX54Q8TDD1 881 aaKnown RBP21.72■■□□□ 1.07
LMNA-216ENST00000496738 NGLY1Q96IV0 654 aa21.72■■□□□ 1.07
LMNA-216ENST00000496738 SLIT2O94813 1529 aa21.72■■□□□ 1.07
LMNA-216ENST00000496738 CCDC9Q9Y3X0 531 aaKnown RBP21.72■■□□□ 1.07
LMNA-216ENST00000496738 SPATA31A6Q5VVP1 1343 aa21.71■■□□□ 1.07
LMNA-216ENST00000496738 PCDH11XQ9BZA7 1347 aa21.71■■□□□ 1.07
LMNA-216ENST00000496738 PCDH11YQ9BZA8 1340 aa21.71■■□□□ 1.07
LMNA-216ENST00000496738 CRBNQ96SW2 442 aa21.71■■□□□ 1.07
LMNA-216ENST00000496738 TNNQ9UQP3 1299 aa21.71■■□□□ 1.07
LMNA-216ENST00000496738 PLEKHG2Q9H7P9 1386 aa21.71■■□□□ 1.07
LMNA-216ENST00000496738 SHANK3Q9BYB0 1731 aa21.7■■□□□ 1.07
LMNA-216ENST00000496738 ADAMTS7Q9UKP4 1686 aa21.7■■□□□ 1.06
LMNA-216ENST00000496738 NWD2Q9ULI1 1742 aa21.7■■□□□ 1.06
LMNA-216ENST00000496738 BTBD11A6QL63 1104 aa21.7■■□□□ 1.06
LMNA-216ENST00000496738 SCN11AQ9UI33 1791 aa21.7■■□□□ 1.06
LMNA-216ENST00000496738 KCNQ3O43525 872 aa21.69■■□□□ 1.06
LMNA-216ENST00000496738 SPATA31A1Q5TZJ5 1347 aa21.68■■□□□ 1.06
LMNA-216ENST00000496738 DCAF5Q96JK2 942 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms