RNA–Protein interactions for RNA: ENST00000496498.1

NPDC1-206, Transcript of neural proliferation, differentiation and control 1, humanhuman

TSL 2

Gene NPDC1, Length 383 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPDC1-206ENST00000496498 DEFB132Q7Z7B7 95 aa24.45■■□□□ 1.5
NPDC1-206ENST00000496498 EYA1Q99502 592 aa24.45■■□□□ 1.5
NPDC1-206ENST00000496498 IGSF1Q8N6C5 1336 aa24.44■■□□□ 1.5
NPDC1-206ENST00000496498 BCL11BQ9C0K0 894 aaPredicted RBP24.44■■□□□ 1.5
NPDC1-206ENST00000496498 APBA3O96018 575 aa24.43■■□□□ 1.5
NPDC1-206ENST00000496498 MTHFSP49914 203 aa24.42■■□□□ 1.5
NPDC1-206ENST00000496498 PCDH11XQ9BZA7 1347 aa24.41■■□□□ 1.5
NPDC1-206ENST00000496498 PCDH11YQ9BZA8 1340 aa24.41■■□□□ 1.5
NPDC1-206ENST00000496498 DDX54Q8TDD1 881 aaKnown RBP24.4■■□□□ 1.5
NPDC1-206ENST00000496498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.4■■□□□ 1.5
NPDC1-206ENST00000496498 RREB1Q92766 1687 aa24.4■■□□□ 1.5
NPDC1-206ENST00000496498 EN1Q05925 392 aaPredicted RBP24.39■■□□□ 1.49
NPDC1-206ENST00000496498 PLSCR1O15162 318 aa24.38■■□□□ 1.49
NPDC1-206ENST00000496498 CAMKK2Q96RR4 588 aa24.38■■□□□ 1.49
NPDC1-206ENST00000496498 SPG7Q9UQ90 795 aa24.38■■□□□ 1.49
NPDC1-206ENST00000496498 IL13P35225 146 aa24.37■■□□□ 1.49
NPDC1-206ENST00000496498 DOT1LQ8TEK3 1739 aa24.37■■□□□ 1.49
NPDC1-206ENST00000496498 KDRP35968 1356 aa24.35■■□□□ 1.49
NPDC1-206ENST00000496498 BTAF1O14981 1849 aa24.33■■□□□ 1.49
NPDC1-206ENST00000496498 DIAPH1O60610 1272 aaKnown RBP24.33■■□□□ 1.49
NPDC1-206ENST00000496498 CNGB1Q14028 1251 aaPredicted RBP24.33■■□□□ 1.49
NPDC1-206ENST00000496498 EZH2Q15910 746 aaKnown RBP24.33■■□□□ 1.49
NPDC1-206ENST00000496498 CFAP53Q96M91 514 aa24.33■■□□□ 1.49
NPDC1-206ENST00000496498 NUP188Q5SRE5 1749 aa24.32■■□□□ 1.48
NPDC1-206ENST00000496498 COL3A1P02461 1466 aaPredicted RBP24.32■■□□□ 1.48
NPDC1-206ENST00000496498 ACSBG1Q96GR2 724 aa24.31■■□□□ 1.48
NPDC1-206ENST00000496498 KAT6BQ8WYB5 2073 aa24.3■■□□□ 1.48
NPDC1-206ENST00000496498 KCNQ2O43526 872 aa24.3■■□□□ 1.48
NPDC1-206ENST00000496498 AMOTQ4VCS5 1084 aa24.3■■□□□ 1.48
NPDC1-206ENST00000496498 CYP27B1O15528 508 aa24.29■■□□□ 1.48
NPDC1-206ENST00000496498 PPP2R1AP30153 589 aa24.29■■□□□ 1.48
NPDC1-206ENST00000496498 SULT6B1Q6IMI4 303 aa24.29■■□□□ 1.48
NPDC1-206ENST00000496498 DDX10Q13206 875 aaKnown RBP24.28■■□□□ 1.48
NPDC1-206ENST00000496498 NKX1-1Q15270 411 aaPredicted RBP24.28■■□□□ 1.48
NPDC1-206ENST00000496498 PLEKHO1Q53GL0 409 aaPredicted RBP24.28■■□□□ 1.48
NPDC1-206ENST00000496498 PTF1AQ7RTS3 328 aa24.28■■□□□ 1.48
NPDC1-206ENST00000496498 IFNL2Q8IZJ0 200 aa24.28■■□□□ 1.48
NPDC1-206ENST00000496498 PRIM1P49642 420 aaKnown RBP24.25■■□□□ 1.47
NPDC1-206ENST00000496498 AEBP1Q8IUX7 1158 aa24.25■■□□□ 1.47
NPDC1-206ENST00000496498 TOGARAM1Q9Y4F4 1720 aa24.24■■□□□ 1.47
NPDC1-206ENST00000496498 HSP90AB1P08238 724 aaKnown RBP24.24■■□□□ 1.47
NPDC1-206ENST00000496498 PHKG2P15735 406 aa24.24■■□□□ 1.47
NPDC1-206ENST00000496498 RALBP1Q15311 655 aa24.24■■□□□ 1.47
NPDC1-206ENST00000496498 NBPF14Q5TI25 921 aa24.24■■□□□ 1.47
NPDC1-206ENST00000496498 SYTL4Q96C24 671 aaPredicted RBP24.24■■□□□ 1.47
NPDC1-206ENST00000496498 NUDCQ9Y266 331 aa24.23■■□□□ 1.47
NPDC1-206ENST00000496498 ITGB4P16144 1822 aa24.23■■□□□ 1.47
NPDC1-206ENST00000496498 TXNRD1Q16881 649 aa24.21■■□□□ 1.47
NPDC1-206ENST00000496498 LY75O60449 1722 aa24.21■■□□□ 1.47
NPDC1-206ENST00000496498 ZNF530Q6P9A1 599 aaPredicted RBP24.2■■□□□ 1.46
NPDC1-206ENST00000496498 U2SURPO15042 1029 aaKnown RBP24.19■■□□□ 1.46
NPDC1-206ENST00000496498 HMGB2P26583 209 aaKnown RBP24.19■■□□□ 1.46
NPDC1-206ENST00000496498 C1orf141Q5JVX7 400 aa24.19■■□□□ 1.46
NPDC1-206ENST00000496498 HMOX1P09601 288 aa24.18■■□□□ 1.46
NPDC1-206ENST00000496498 SLC27A3Q5K4L6 730 aa24.18■■□□□ 1.46
NPDC1-206ENST00000496498 PROM2Q8N271 834 aa24.18■■□□□ 1.46
NPDC1-206ENST00000496498 DCAF5Q96JK2 942 aa24.18■■□□□ 1.46
NPDC1-206ENST00000496498 ZNF316A6NFI3 1004 aaPredicted RBP24.16■■□□□ 1.46
NPDC1-206ENST00000496498 PAPPAQ13219 1627 aa24.16■■□□□ 1.46
NPDC1-206ENST00000496498 ERVV-2B6SEH9 535 aa24.15■■□□□ 1.46
NPDC1-206ENST00000496498 SMARCC1Q92922 1105 aaPredicted RBP24.15■■□□□ 1.46
NPDC1-206ENST00000496498 AKAP4Q5JQC9 854 aa24.14■■□□□ 1.45
NPDC1-206ENST00000496498 MPRIPQ6WCQ1 1025 aa24.14■■□□□ 1.45
NPDC1-206ENST00000496498 TMOD3Q9NYL9 352 aa24.14■■□□□ 1.45
NPDC1-206ENST00000496498 R3HDM1Q15032 1099 aaKnown RBP24.13■■□□□ 1.45
NPDC1-206ENST00000496498 SCN11AQ9UI33 1791 aa24.13■■□□□ 1.45
NPDC1-206ENST00000496498 MYBBP1AQ9BQG0 1328 aaKnown RBP24.12■■□□□ 1.45
NPDC1-206ENST00000496498 KDM6AO15550 1401 aaPredicted RBP24.12■■□□□ 1.45
NPDC1-206ENST00000496498 PSDA5PKW4 1024 aaPredicted RBP24.11■■□□□ 1.45
NPDC1-206ENST00000496498 STK32BQ9NY57 414 aa24.11■■□□□ 1.45
NPDC1-206ENST00000496498 FCHSD2O94868 740 aa24.1■■□□□ 1.45
NPDC1-206ENST00000496498 U2AF1L5P0DN76 240 aaPredicted RBP24.1■■□□□ 1.45
NPDC1-206ENST00000496498 U2AF1Q01081 240 aaKnown RBP eCLIP24.1■■□□□ 1.45
NPDC1-206ENST00000496498 GAS2L2Q8NHY3 880 aa24.1■■□□□ 1.45
NPDC1-206ENST00000496498 PIGBQ92521 554 aa24.1■■□□□ 1.45
NPDC1-206ENST00000496498 PALLDQ8WX93 1383 aa24.1■■□□□ 1.45
NPDC1-206ENST00000496498 ADAMTS7Q9UKP4 1686 aa24.09■■□□□ 1.45
NPDC1-206ENST00000496498 RSPH6AQ9H0K4 717 aa24.09■■□□□ 1.45
NPDC1-206ENST00000496498 VIRMAQ69YN4 1812 aaKnown RBP24.09■■□□□ 1.45
NPDC1-206ENST00000496498 LRP5O75197 1615 aa24.09■■□□□ 1.45
NPDC1-206ENST00000496498 CCNL1Q9UK58 526 aaPredicted RBP24.08■■□□□ 1.45
NPDC1-206ENST00000496498 QSER1Q2KHR3 1735 aa24.07■■□□□ 1.44
NPDC1-206ENST00000496498 SLC15A2Q16348 729 aa24.07■■□□□ 1.44
NPDC1-206ENST00000496498 MTHFSDQ2M296 383 aaKnown RBP24.07■■□□□ 1.44
NPDC1-206ENST00000496498 ANO8Q9HCE9 1232 aaPredicted RBP24.07■■□□□ 1.44
NPDC1-206ENST00000496498 LRRC4BQ9NT99 713 aa24.07■■□□□ 1.44
NPDC1-206ENST00000496498 C5P01031 1676 aa24.06■■□□□ 1.44
NPDC1-206ENST00000496498 PRKAR2BP31323 418 aa24.06■■□□□ 1.44
NPDC1-206ENST00000496498 CABP4P57796 275 aa24.06■■□□□ 1.44
NPDC1-206ENST00000496498 MRC1P22897 1456 aa24.06■■□□□ 1.44
NPDC1-206ENST00000496498 ZNF831Q5JPB2 1677 aa24.05■■□□□ 1.44
NPDC1-206ENST00000496498 PRKRIP1Q9H875 184 aaPredicted RBP24.05■■□□□ 1.44
NPDC1-206ENST00000496498 CASZ1Q86V15 1759 aa24.04■■□□□ 1.44
NPDC1-206ENST00000496498 PNNQ9H307 717 aaKnown RBP24.04■■□□□ 1.44
NPDC1-206ENST00000496498 TAF1LQ8IZX4 1826 aa24.04■■□□□ 1.44
NPDC1-206ENST00000496498 MAP3K5Q99683 1374 aa24.03■■□□□ 1.44
NPDC1-206ENST00000496498 NEFMP07197 916 aa24.03■■□□□ 1.44
NPDC1-206ENST00000496498 GNAT3A8MTJ3 354 aa24■■□□□ 1.43
NPDC1-206ENST00000496498 RNMTO43148 476 aaKnown RBP24■■□□□ 1.43
NPDC1-206ENST00000496498 AKT1S1Q96B36 256 aa24■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms