RNA–Protein interactions for RNA: ENST00000496423.1

ATG3-209, Transcript of autophagy related 3, humanhuman

TSL 5

Gene ATG3, Length 737 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-209ENST00000496423 CCNL1Q9UK58 526 aaPredicted RBP17.02■□□□□ 0.32
ATG3-209ENST00000496423 SLC34A2O95436 690 aa17.01■□□□□ 0.31
ATG3-209ENST00000496423 RBM46Q8TBY0 533 aaKnown RBP17.01■□□□□ 0.31
ATG3-209ENST00000496423 DDX54Q8TDD1 881 aaKnown RBP17.01■□□□□ 0.31
ATG3-209ENST00000496423 WWC3Q9ULE0 1092 aa17.01■□□□□ 0.31
ATG3-209ENST00000496423 IGSF1Q8N6C5 1336 aa17■□□□□ 0.31
ATG3-209ENST00000496423 KCNQ4P56696 695 aa17■□□□□ 0.31
ATG3-209ENST00000496423 PIK3C2AO00443 1686 aa17■□□□□ 0.31
ATG3-209ENST00000496423 QRICH2Q9H0J4 1663 aa17■□□□□ 0.31
ATG3-209ENST00000496423 TTC21AQ8NDW8 1320 aa16.99■□□□□ 0.31
ATG3-209ENST00000496423 FSTL1Q12841 308 aa16.99■□□□□ 0.31
ATG3-209ENST00000496423 PCDH10Q9P2E7 1040 aa16.98■□□□□ 0.31
ATG3-209ENST00000496423 ERBB3P21860 1342 aa16.97■□□□□ 0.31
ATG3-209ENST00000496423 TTC21BQ7Z4L5 1316 aa16.97■□□□□ 0.31
ATG3-209ENST00000496423 LY75O60449 1722 aa16.97■□□□□ 0.31
ATG3-209ENST00000496423 PRIM1P49642 420 aaKnown RBP16.97■□□□□ 0.31
ATG3-209ENST00000496423 CENPJQ9HC77 1338 aaPredicted RBP16.96■□□□□ 0.31
ATG3-209ENST00000496423 ANKRD36BQ8N2N9 1353 aa16.96■□□□□ 0.31
ATG3-209ENST00000496423 USP47Q96K76 1375 aa16.95■□□□□ 0.3
ATG3-209ENST00000496423 ANKRD24Q8TF21 1146 aa16.94■□□□□ 0.3
ATG3-209ENST00000496423 HOXD11P31277 338 aaPredicted RBP16.92■□□□□ 0.3
ATG3-209ENST00000496423 NMRK2Q9NPI5 230 aa16.92■□□□□ 0.3
ATG3-209ENST00000496423 EVC2Q86UK5 1308 aa16.92■□□□□ 0.3
ATG3-209ENST00000496423 KIAA1210Q9ULL0 1709 aa16.91■□□□□ 0.3
ATG3-209ENST00000496423 HTRA3P83110 453 aa16.91■□□□□ 0.3
ATG3-209ENST00000496423 NFAT5O94916 1531 aa16.91■□□□□ 0.3
ATG3-209ENST00000496423 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
ATG3-209ENST00000496423 KDM2BQ8NHM5 1336 aa16.9■□□□□ 0.3
ATG3-209ENST00000496423 ARHGAP27Q6ZUM4 889 aa16.89■□□□□ 0.29
ATG3-209ENST00000496423 NSD3Q9BZ95 1437 aa16.88■□□□□ 0.29
ATG3-209ENST00000496423 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
ATG3-209ENST00000496423 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
ATG3-209ENST00000496423 AK7Q96M32 723 aa16.88■□□□□ 0.29
ATG3-209ENST00000496423 CICQ96RK0 1608 aaPredicted RBP16.88■□□□□ 0.29
ATG3-209ENST00000496423 DOT1LQ8TEK3 1739 aa16.87■□□□□ 0.29
ATG3-209ENST00000496423 ZCRB1Q8TBF4 217 aaKnown RBP16.87■□□□□ 0.29
ATG3-209ENST00000496423 BCS1LQ9Y276 419 aa16.87■□□□□ 0.29
ATG3-209ENST00000496423 KTN1Q86UP2 1357 aaKnown RBP16.87■□□□□ 0.29
ATG3-209ENST00000496423 C5P01031 1676 aa16.86■□□□□ 0.29
ATG3-209ENST00000496423 TGFB2P61812 414 aa16.86■□□□□ 0.29
ATG3-209ENST00000496423 SMC1BQ8NDV3 1235 aa16.86■□□□□ 0.29
ATG3-209ENST00000496423 LTN1O94822 1766 aa16.86■□□□□ 0.29
ATG3-209ENST00000496423 PLEKHG2Q9H7P9 1386 aa16.86■□□□□ 0.29
ATG3-209ENST00000496423 NSD2O96028 1365 aa16.83■□□□□ 0.28
ATG3-209ENST00000496423 NBPF1Q3BBV0 1214 aa16.83■□□□□ 0.28
ATG3-209ENST00000496423 FAM208AQ9UK61 1670 aaKnown RBP16.82■□□□□ 0.28
ATG3-209ENST00000496423 USP31Q70CQ4 1352 aa16.82■□□□□ 0.28
ATG3-209ENST00000496423 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.82■□□□□ 0.28
ATG3-209ENST00000496423 PHF14O94880 888 aa16.81■□□□□ 0.28
ATG3-209ENST00000496423 C9orf131Q5VYM1 1079 aa16.81■□□□□ 0.28
ATG3-209ENST00000496423 SMARCC1Q92922 1105 aaPredicted RBP16.81■□□□□ 0.28
ATG3-209ENST00000496423 RRAGCQ9HB90 399 aa16.81■□□□□ 0.28
ATG3-209ENST00000496423 TAF1LQ8IZX4 1826 aa16.8■□□□□ 0.28
ATG3-209ENST00000496423 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.8■□□□□ 0.28
ATG3-209ENST00000496423 FCHSD2O94868 740 aa16.8■□□□□ 0.28
ATG3-209ENST00000496423 SSFA2P28290 1259 aa16.8■□□□□ 0.28
ATG3-209ENST00000496423 IP6K1Q92551 441 aa16.8■□□□□ 0.28
ATG3-209ENST00000496423 LTV1Q96GA3 475 aaPredicted RBP16.8■□□□□ 0.28
ATG3-209ENST00000496423 USP54Q70EL1 1684 aa16.8■□□□□ 0.28
ATG3-209ENST00000496423 C10orf71Q711Q0 1435 aa16.79■□□□□ 0.28
ATG3-209ENST00000496423 CGNL1Q0VF96 1302 aa16.78■□□□□ 0.28
ATG3-209ENST00000496423 PALLDQ8WX93 1383 aa16.77■□□□□ 0.28
ATG3-209ENST00000496423 C4BP0C0L5 1744 aa16.77■□□□□ 0.28
ATG3-209ENST00000496423 A0A0G2JLW4 131 aa16.77■□□□□ 0.28
ATG3-209ENST00000496423 TNRC6CQ9HCJ0 1690 aaKnown RBP16.75■□□□□ 0.27
ATG3-209ENST00000496423 MMP10P09238 476 aa16.75■□□□□ 0.27
ATG3-209ENST00000496423 MPRIPQ6WCQ1 1025 aa16.75■□□□□ 0.27
ATG3-209ENST00000496423 CCDC87Q9NVE4 849 aa16.75■□□□□ 0.27
ATG3-209ENST00000496423 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
ATG3-209ENST00000496423 PXDNLA1KZ92 1463 aa16.74■□□□□ 0.27
ATG3-209ENST00000496423 HDGFL2Q7Z4V5 671 aaPredicted RBP16.74■□□□□ 0.27
ATG3-209ENST00000496423 NME9Q86XW9 330 aa16.74■□□□□ 0.27
ATG3-209ENST00000496423 RAPGEF4Q8WZA2 1011 aa16.74■□□□□ 0.27
ATG3-209ENST00000496423 RNF181Q9P0P0 153 aa16.74■□□□□ 0.27
ATG3-209ENST00000496423 KCPQ6ZWJ8 1503 aa16.74■□□□□ 0.27
ATG3-209ENST00000496423 UBR3Q6ZT12 1888 aa16.73■□□□□ 0.27
ATG3-209ENST00000496423 KIF13BQ9NQT8 1826 aa16.73■□□□□ 0.27
ATG3-209ENST00000496423 NLGN1Q8N2Q7 840 aa16.73■□□□□ 0.27
ATG3-209ENST00000496423 MON2Q7Z3U7 1717 aa16.73■□□□□ 0.27
ATG3-209ENST00000496423 AMPHP49418 695 aa16.72■□□□□ 0.27
ATG3-209ENST00000496423 PRDM10Q9NQV6 1147 aa16.72■□□□□ 0.27
ATG3-209ENST00000496423 PIM2Q9P1W9 311 aa16.72■□□□□ 0.27
ATG3-209ENST00000496423 RAB3GAP2Q9H2M9 1393 aa16.72■□□□□ 0.27
ATG3-209ENST00000496423 PKD1L3Q7Z443 1732 aa16.71■□□□□ 0.27
ATG3-209ENST00000496423 VEGFAP15692 232 aaPredicted RBP16.71■□□□□ 0.27
ATG3-209ENST00000496423 TATP17735 454 aaPredicted RBP16.71■□□□□ 0.27
ATG3-209ENST00000496423 DPEP1P16444 411 aa16.7■□□□□ 0.26
ATG3-209ENST00000496423 TMF1P82094 1093 aa16.7■□□□□ 0.26
ATG3-209ENST00000496423 PCDH11XQ9BZA7 1347 aa16.7■□□□□ 0.26
ATG3-209ENST00000496423 PCDH11YQ9BZA8 1340 aa16.7■□□□□ 0.26
ATG3-209ENST00000496423 PCNTO95613 3336 aa16.69■□□□□ 0.26
ATG3-209ENST00000496423 ARFGEF1Q9Y6D6 1849 aa16.69■□□□□ 0.26
ATG3-209ENST00000496423 GNPATO15228 680 aa16.69■□□□□ 0.26
ATG3-209ENST00000496423 AIDAQ96BJ3 306 aa16.69■□□□□ 0.26
ATG3-209ENST00000496423 PARP3Q9Y6F1 533 aa16.69■□□□□ 0.26
ATG3-209ENST00000496423 ZC3H4Q9UPT8 1303 aaKnown RBP16.69■□□□□ 0.26
ATG3-209ENST00000496423 DALRD3Q5D0E6 543 aaKnown RBP16.68■□□□□ 0.26
ATG3-209ENST00000496423 FAM161AQ3B820 660 aa16.67■□□□□ 0.26
ATG3-209ENST00000496423 TRAPPC3LQ5T215 181 aa16.67■□□□□ 0.26
ATG3-209ENST00000496423 AMIGO3Q86WK7 504 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms