RNA–Protein interactions for RNA: ENST00000496071.5

COMMD3-214, Transcript of COMM domain containing 3, humanhuman

TSL 5

Gene COMMD3, Length 1,150 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-214ENST00000496071 NBPF14Q5TI25 921 aa23.31■■□□□ 1.32
COMMD3-214ENST00000496071 PTF1AQ7RTS3 328 aa23.31■■□□□ 1.32
COMMD3-214ENST00000496071 MEGF6O75095 1541 aa23.3■■□□□ 1.32
COMMD3-214ENST00000496071 NUP188Q5SRE5 1749 aa23.3■■□□□ 1.32
COMMD3-214ENST00000496071 KCNQ2O43526 872 aa23.29■■□□□ 1.32
COMMD3-214ENST00000496071 ACSBG1Q96GR2 724 aa23.29■■□□□ 1.32
COMMD3-214ENST00000496071 KAT6BQ8WYB5 2073 aa23.29■■□□□ 1.32
COMMD3-214ENST00000496071 PSDA5PKW4 1024 aaPredicted RBP23.28■■□□□ 1.32
COMMD3-214ENST00000496071 ADRA2BP18089 450 aa23.27■■□□□ 1.32
COMMD3-214ENST00000496071 R3HDM1Q15032 1099 aaKnown RBP23.27■■□□□ 1.32
COMMD3-214ENST00000496071 AMER1Q5JTC6 1135 aaPredicted RBP23.27■■□□□ 1.32
COMMD3-214ENST00000496071 SHANK3Q9BYB0 1731 aa23.26■■□□□ 1.31
COMMD3-214ENST00000496071 PER1O15534 1290 aaPredicted RBP23.26■■□□□ 1.31
COMMD3-214ENST00000496071 PIAS4Q8N2W9 510 aaPredicted RBP23.26■■□□□ 1.31
COMMD3-214ENST00000496071 NCAPD2Q15021 1401 aa23.25■■□□□ 1.31
COMMD3-214ENST00000496071 EYA1Q99502 592 aa23.25■■□□□ 1.31
COMMD3-214ENST00000496071 EIF4A2Q14240 407 aaKnown RBP23.23■■□□□ 1.31
COMMD3-214ENST00000496071 BTAF1O14981 1849 aa23.23■■□□□ 1.31
COMMD3-214ENST00000496071 PCDH11XQ9BZA7 1347 aa23.23■■□□□ 1.31
COMMD3-214ENST00000496071 PCDH11YQ9BZA8 1340 aa23.23■■□□□ 1.31
COMMD3-214ENST00000496071 TXNRD1Q16881 649 aa23.22■■□□□ 1.31
COMMD3-214ENST00000496071 PROM2Q8N271 834 aa23.22■■□□□ 1.31
COMMD3-214ENST00000496071 SPG7Q9UQ90 795 aa23.2■■□□□ 1.3
COMMD3-214ENST00000496071 PKD1L3Q7Z443 1732 aa23.19■■□□□ 1.3
COMMD3-214ENST00000496071 DOT1LQ8TEK3 1739 aa23.19■■□□□ 1.3
COMMD3-214ENST00000496071 PRIM1P49642 420 aaKnown RBP23.19■■□□□ 1.3
COMMD3-214ENST00000496071 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.19■■□□□ 1.3
COMMD3-214ENST00000496071 NPC1L1Q9UHC9 1359 aa23.18■■□□□ 1.3
COMMD3-214ENST00000496071 SYTL4Q96C24 671 aaPredicted RBP23.18■■□□□ 1.3
COMMD3-214ENST00000496071 PLEKHG2Q9H7P9 1386 aa23.17■■□□□ 1.3
COMMD3-214ENST00000496071 LRP5O75197 1615 aa23.17■■□□□ 1.3
COMMD3-214ENST00000496071 IGSF1Q8N6C5 1336 aa23.16■■□□□ 1.3
COMMD3-214ENST00000496071 CC2D1BQ5T0F9 858 aaKnown RBP23.16■■□□□ 1.3
COMMD3-214ENST00000496071 CYP27B1O15528 508 aa23.15■■□□□ 1.3
COMMD3-214ENST00000496071 MTHFSP49914 203 aa23.13■■□□□ 1.29
COMMD3-214ENST00000496071 STK32BQ9NY57 414 aa23.13■■□□□ 1.29
COMMD3-214ENST00000496071 NKX1-1Q15270 411 aaPredicted RBP23.12■■□□□ 1.29
COMMD3-214ENST00000496071 SLC27A3Q5K4L6 730 aa23.12■■□□□ 1.29
COMMD3-214ENST00000496071 ANO8Q9HCE9 1232 aaPredicted RBP23.12■■□□□ 1.29
COMMD3-214ENST00000496071 SLC15A2Q16348 729 aa23.1■■□□□ 1.29
COMMD3-214ENST00000496071 IFNL2Q8IZJ0 200 aa23.1■■□□□ 1.29
COMMD3-214ENST00000496071 IL13P35225 146 aa23.09■■□□□ 1.29
COMMD3-214ENST00000496071 LY75O60449 1722 aa23.08■■□□□ 1.29
COMMD3-214ENST00000496071 PLEKHO1Q53GL0 409 aaPredicted RBP23.08■■□□□ 1.29
COMMD3-214ENST00000496071 PHKG2P15735 406 aa23.07■■□□□ 1.28
COMMD3-214ENST00000496071 AMOTQ4VCS5 1084 aa23.07■■□□□ 1.28
COMMD3-214ENST00000496071 LRRC4BQ9NT99 713 aa23.07■■□□□ 1.28
COMMD3-214ENST00000496071 ITGB4P16144 1822 aa23.07■■□□□ 1.28
COMMD3-214ENST00000496071 HMGB2P26583 209 aaKnown RBP23.06■■□□□ 1.28
COMMD3-214ENST00000496071 MPRIPQ6WCQ1 1025 aa23.06■■□□□ 1.28
COMMD3-214ENST00000496071 PAPPAQ13219 1627 aa23.05■■□□□ 1.28
COMMD3-214ENST00000496071 CNGB1Q14028 1251 aaPredicted RBP23.05■■□□□ 1.28
COMMD3-214ENST00000496071 SULT6B1Q6IMI4 303 aa23.05■■□□□ 1.28
COMMD3-214ENST00000496071 TOGARAM1Q9Y4F4 1720 aa23.05■■□□□ 1.28
COMMD3-214ENST00000496071 KDRP35968 1356 aa23.04■■□□□ 1.28
COMMD3-214ENST00000496071 DIAPH1O60610 1272 aaKnown RBP23.04■■□□□ 1.28
COMMD3-214ENST00000496071 SPON1Q9HCB6 807 aa23.04■■□□□ 1.28
COMMD3-214ENST00000496071 HSP90AB1P08238 724 aaKnown RBP23.03■■□□□ 1.28
COMMD3-214ENST00000496071 AEBP1Q8IUX7 1158 aa23.03■■□□□ 1.28
COMMD3-214ENST00000496071 SMARCC1Q92922 1105 aaPredicted RBP23.03■■□□□ 1.28
COMMD3-214ENST00000496071 CASZ1Q86V15 1759 aa23.03■■□□□ 1.28
COMMD3-214ENST00000496071 CCNL1Q9UK58 526 aaPredicted RBP23.02■■□□□ 1.28
COMMD3-214ENST00000496071 ZNF530Q6P9A1 599 aaPredicted RBP23■■□□□ 1.27
COMMD3-214ENST00000496071 PIGBQ92521 554 aa23■■□□□ 1.27
COMMD3-214ENST00000496071 DCAF5Q96JK2 942 aa23■■□□□ 1.27
COMMD3-214ENST00000496071 TMOD3Q9NYL9 352 aa23■■□□□ 1.27
COMMD3-214ENST00000496071 AKT1S1Q96B36 256 aa22.99■■□□□ 1.27
COMMD3-214ENST00000496071 SRCAPQ6ZRS2 3230 aa22.99■■□□□ 1.27
COMMD3-214ENST00000496071 PALLDQ8WX93 1383 aa22.99■■□□□ 1.27
COMMD3-214ENST00000496071 ERVV-2B6SEH9 535 aa22.98■■□□□ 1.27
COMMD3-214ENST00000496071 ZNF827Q17R98 1081 aa22.98■■□□□ 1.27
COMMD3-214ENST00000496071 C1orf141Q5JVX7 400 aa22.98■■□□□ 1.27
COMMD3-214ENST00000496071 QSER1Q2KHR3 1735 aa22.97■■□□□ 1.27
COMMD3-214ENST00000496071 KCNQ4P56696 695 aa22.97■■□□□ 1.27
COMMD3-214ENST00000496071 CFAP53Q96M91 514 aa22.97■■□□□ 1.27
COMMD3-214ENST00000496071 PDGFDQ9GZP0 370 aaPredicted RBP22.97■■□□□ 1.27
COMMD3-214ENST00000496071 HMOX1P09601 288 aa22.95■■□□□ 1.26
COMMD3-214ENST00000496071 TFCP2L1Q9NZI6 479 aa22.95■■□□□ 1.26
COMMD3-214ENST00000496071 PPP1R1BQ9UD71 204 aaPredicted RBP22.95■■□□□ 1.26
COMMD3-214ENST00000496071 COL3A1P02461 1466 aaPredicted RBP22.94■■□□□ 1.26
COMMD3-214ENST00000496071 ZBTB7AO95365 584 aa22.94■■□□□ 1.26
COMMD3-214ENST00000496071 MTFR1LQ9H019 292 aa22.94■■□□□ 1.26
COMMD3-214ENST00000496071 SLC16A10Q8TF71 515 aa22.93■■□□□ 1.26
COMMD3-214ENST00000496071 C5P01031 1676 aa22.93■■□□□ 1.26
COMMD3-214ENST00000496071 TAF1LQ8IZX4 1826 aa22.92■■□□□ 1.26
COMMD3-214ENST00000496071 U2SURPO15042 1029 aaKnown RBP22.92■■□□□ 1.26
COMMD3-214ENST00000496071 PPP2R1AP30153 589 aa22.92■■□□□ 1.26
COMMD3-214ENST00000496071 CABP4P57796 275 aa22.92■■□□□ 1.26
COMMD3-214ENST00000496071 AKAP4Q5JQC9 854 aa22.92■■□□□ 1.26
COMMD3-214ENST00000496071 ATF5Q9Y2D1 282 aaPredicted RBP22.91■■□□□ 1.26
COMMD3-214ENST00000496071 KDM6AO15550 1401 aaPredicted RBP22.91■■□□□ 1.26
COMMD3-214ENST00000496071 ASAP1Q9ULH1 1129 aa22.9■■□□□ 1.26
COMMD3-214ENST00000496071 NUDCQ9Y266 331 aa22.9■■□□□ 1.26
COMMD3-214ENST00000496071 PNPLA7Q6ZV29 1317 aa22.89■■□□□ 1.26
COMMD3-214ENST00000496071 LOC102724428A0A0B4J2F2 783 aa22.89■■□□□ 1.25
COMMD3-214ENST00000496071 SIK1P57059 783 aa22.89■■□□□ 1.25
COMMD3-214ENST00000496071 ATG3Q9NT62 314 aa22.89■■□□□ 1.25
COMMD3-214ENST00000496071 TUBGCP6Q96RT7 1819 aa22.89■■□□□ 1.25
COMMD3-214ENST00000496071 ZEB1P37275 1124 aaPredicted RBP22.88■■□□□ 1.25
COMMD3-214ENST00000496071 SCN11AQ9UI33 1791 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms