RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
SMARCAL1-213ENST00000496037 PRKAR2AP13861 404 aaKnown RBP14.22□□□□□ -0.13
SMARCAL1-213ENST00000496037 CARD10Q9BWT7 1032 aa14.22□□□□□ -0.13
SMARCAL1-213ENST00000496037 PCNTO95613 3336 aa14.22□□□□□ -0.13
SMARCAL1-213ENST00000496037 PLEKHG3A1L390 1219 aa14.21□□□□□ -0.13
SMARCAL1-213ENST00000496037 TOMM70O94826 608 aa14.21□□□□□ -0.13
SMARCAL1-213ENST00000496037 SLC27A3Q5K4L6 730 aa14.21□□□□□ -0.13
SMARCAL1-213ENST00000496037 KLRG1Q96E93 195 aa14.21□□□□□ -0.13
SMARCAL1-213ENST00000496037 CDK19Q9BWU1 502 aa14.21□□□□□ -0.13
SMARCAL1-213ENST00000496037 ARHGEF28Q8N1W1 1705 aaKnown RBP14.21□□□□□ -0.14
SMARCAL1-213ENST00000496037 CCDC7Q96M83 1385 aa14.21□□□□□ -0.14
SMARCAL1-213ENST00000496037 SLIT3O75094 1523 aa14.2□□□□□ -0.14
SMARCAL1-213ENST00000496037 ABCC6O95255 1503 aa14.2□□□□□ -0.14
SMARCAL1-213ENST00000496037 BTAF1O14981 1849 aa14.2□□□□□ -0.14
SMARCAL1-213ENST00000496037 WDR90Q96KV7 1748 aa14.19□□□□□ -0.14
SMARCAL1-213ENST00000496037 CPSF1Q10570 1443 aaKnown RBP14.19□□□□□ -0.14
SMARCAL1-213ENST00000496037 PPIP5K1Q6PFW1 1433 aa14.19□□□□□ -0.14
SMARCAL1-213ENST00000496037 NLRP6P59044 892 aa14.19□□□□□ -0.14
SMARCAL1-213ENST00000496037 JMYQ8N9B5 988 aa14.19□□□□□ -0.14
SMARCAL1-213ENST00000496037 MPHOSPH9Q99550 1183 aa14.18□□□□□ -0.14
SMARCAL1-213ENST00000496037 AXIN2Q9Y2T1 843 aa14.18□□□□□ -0.14
SMARCAL1-213ENST00000496037 CD2APQ9Y5K6 639 aa14.18□□□□□ -0.14
SMARCAL1-213ENST00000496037 TRPM1Q7Z4N2 1603 aa14.18□□□□□ -0.14
SMARCAL1-213ENST00000496037 WWC3Q9ULE0 1092 aa14.17□□□□□ -0.14
SMARCAL1-213ENST00000496037 COL18A1P39060 1754 aa14.17□□□□□ -0.14
SMARCAL1-213ENST00000496037 TUBGCP6Q96RT7 1819 aa14.15□□□□□ -0.14
SMARCAL1-213ENST00000496037 MSL1Q68DK7 614 aa14.15□□□□□ -0.14
SMARCAL1-213ENST00000496037 TPRNQ4KMQ1 711 aa14.14□□□□□ -0.15
SMARCAL1-213ENST00000496037 PPARGC1BQ86YN6 1023 aaKnown RBP14.14□□□□□ -0.15
SMARCAL1-213ENST00000496037 PCDH10Q9P2E7 1040 aa14.14□□□□□ -0.15
SMARCAL1-213ENST00000496037 HTRA3P83110 453 aa14.13□□□□□ -0.15
SMARCAL1-213ENST00000496037 CHADLQ6NUI6 762 aa14.12□□□□□ -0.15
SMARCAL1-213ENST00000496037 ARHGEF25Q86VW2 580 aa14.12□□□□□ -0.15
SMARCAL1-213ENST00000496037 C16orf71Q8IYS4 520 aaPredicted RBP14.12□□□□□ -0.15
SMARCAL1-213ENST00000496037 IGSF1Q8N6C5 1336 aa14.12□□□□□ -0.15
SMARCAL1-213ENST00000496037 PIK3C2AO00443 1686 aa14.11□□□□□ -0.15
SMARCAL1-213ENST00000496037 SOX12O15370 315 aa14.11□□□□□ -0.15
SMARCAL1-213ENST00000496037 IL2RBP14784 551 aa14.11□□□□□ -0.15
SMARCAL1-213ENST00000496037 KCNQ4P56696 695 aa14.11□□□□□ -0.15
SMARCAL1-213ENST00000496037 SRPK2P78362 688 aaKnown RBP14.11□□□□□ -0.15
SMARCAL1-213ENST00000496037 VSIG10Q8N0Z9 540 aa14.11□□□□□ -0.15
SMARCAL1-213ENST00000496037 KCNH5Q8NCM2 988 aa14.11□□□□□ -0.15
SMARCAL1-213ENST00000496037 RBM46Q8TBY0 533 aaKnown RBP14.11□□□□□ -0.15
SMARCAL1-213ENST00000496037 COL23A1Q86Y22 540 aaPredicted RBP14.1□□□□□ -0.15
SMARCAL1-213ENST00000496037 SYTL4Q96C24 671 aaPredicted RBP14.09□□□□□ -0.15
SMARCAL1-213ENST00000496037 KDM2AQ9Y2K7 1162 aa14.09□□□□□ -0.15
SMARCAL1-213ENST00000496037 RGPD5Q99666 1765 aa14.09□□□□□ -0.15
SMARCAL1-213ENST00000496037 FSTL1Q12841 308 aa14.08□□□□□ -0.16
SMARCAL1-213ENST00000496037 NMRK2Q9NPI5 230 aa14.08□□□□□ -0.16
SMARCAL1-213ENST00000496037 NLRP2Q9NX02 1062 aa14.08□□□□□ -0.16
SMARCAL1-213ENST00000496037 CCNL1Q9UK58 526 aaPredicted RBP14.08□□□□□ -0.16
SMARCAL1-213ENST00000496037 CICQ96RK0 1608 aaPredicted RBP14.08□□□□□ -0.16
SMARCAL1-213ENST00000496037 HSPA1AP0DMV8 641 aaKnown RBP14.07□□□□□ -0.16
SMARCAL1-213ENST00000496037 HSPA1BP0DMV9 641 aaKnown RBP14.07□□□□□ -0.16
SMARCAL1-213ENST00000496037 DCAF11Q8TEB1 546 aa14.06□□□□□ -0.16
SMARCAL1-213ENST00000496037 QRICH2Q9H0J4 1663 aa14.06□□□□□ -0.16
SMARCAL1-213ENST00000496037 KAT6BQ8WYB5 2073 aa14.05□□□□□ -0.16
SMARCAL1-213ENST00000496037 ERICH6Q7L0X2 663 aa14.05□□□□□ -0.16
SMARCAL1-213ENST00000496037 LY75O60449 1722 aa14.04□□□□□ -0.16
SMARCAL1-213ENST00000496037 FLAD1Q8NFF5 587 aa14.04□□□□□ -0.16
SMARCAL1-213ENST00000496037 CREBZFQ9NS37 354 aa14.04□□□□□ -0.16
SMARCAL1-213ENST00000496037 ERBB3P21860 1342 aa14.04□□□□□ -0.16
SMARCAL1-213ENST00000496037 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
SMARCAL1-213ENST00000496037 STAC3Q96MF2 364 aa14.03□□□□□ -0.16
SMARCAL1-213ENST00000496037 CABP2Q9NPB3 220 aa14.03□□□□□ -0.16
SMARCAL1-213ENST00000496037 CABP1Q9NZU7 370 aa14.03□□□□□ -0.16
SMARCAL1-213ENST00000496037 TIMELESSQ9UNS1 1208 aa14.03□□□□□ -0.16
SMARCAL1-213ENST00000496037 ANKRD36BQ8N2N9 1353 aa14.03□□□□□ -0.16
SMARCAL1-213ENST00000496037 NFAT5O94916 1531 aa14.03□□□□□ -0.16
SMARCAL1-213ENST00000496037 HMGB2P26583 209 aaKnown RBP14.02□□□□□ -0.17
SMARCAL1-213ENST00000496037 USP47Q96K76 1375 aa14.01□□□□□ -0.17
SMARCAL1-213ENST00000496037 HAX1O00165 279 aa14.01□□□□□ -0.17
SMARCAL1-213ENST00000496037 PRIM1P49642 420 aaKnown RBP14.01□□□□□ -0.17
SMARCAL1-213ENST00000496037 FBXO3Q9UK99 471 aa14.01□□□□□ -0.17
SMARCAL1-213ENST00000496037 PLEKHG2Q9H7P9 1386 aa14□□□□□ -0.17
SMARCAL1-213ENST00000496037 FARP1Q9Y4F1 1045 aaPredicted RBP14□□□□□ -0.17
SMARCAL1-213ENST00000496037 DOT1LQ8TEK3 1739 aa14□□□□□ -0.17
SMARCAL1-213ENST00000496037 NSD2O96028 1365 aa13.99□□□□□ -0.17
SMARCAL1-213ENST00000496037 TTC21BQ7Z4L5 1316 aa13.98□□□□□ -0.17
SMARCAL1-213ENST00000496037 TTC21AQ8NDW8 1320 aa13.98□□□□□ -0.17
SMARCAL1-213ENST00000496037 KDM2BQ8NHM5 1336 aa13.98□□□□□ -0.17
SMARCAL1-213ENST00000496037 SMC1BQ8NDV3 1235 aa13.98□□□□□ -0.17
SMARCAL1-213ENST00000496037 ARHGAP27Q6ZUM4 889 aa13.97□□□□□ -0.17
SMARCAL1-213ENST00000496037 ANKRD24Q8TF21 1146 aa13.97□□□□□ -0.17
SMARCAL1-213ENST00000496037 BCS1LQ9Y276 419 aa13.97□□□□□ -0.17
SMARCAL1-213ENST00000496037 C5P01031 1676 aa13.97□□□□□ -0.17
SMARCAL1-213ENST00000496037 CENPJQ9HC77 1338 aaPredicted RBP13.96□□□□□ -0.17
SMARCAL1-213ENST00000496037 C10orf71Q711Q0 1435 aa13.96□□□□□ -0.18
SMARCAL1-213ENST00000496037 AK7Q96M32 723 aa13.95□□□□□ -0.18
SMARCAL1-213ENST00000496037 NSD3Q9BZ95 1437 aa13.95□□□□□ -0.18
SMARCAL1-213ENST00000496037 KCPQ6ZWJ8 1503 aa13.95□□□□□ -0.18
SMARCAL1-213ENST00000496037 USP54Q70EL1 1684 aa13.95□□□□□ -0.18
SMARCAL1-213ENST00000496037 TULP1O00294 542 aaPredicted RBP13.94□□□□□ -0.18
SMARCAL1-213ENST00000496037 FAM161AQ3B820 660 aa13.94□□□□□ -0.18
SMARCAL1-213ENST00000496037 PXDNLA1KZ92 1463 aa13.93□□□□□ -0.18
SMARCAL1-213ENST00000496037 PHF14O94880 888 aa13.93□□□□□ -0.18
SMARCAL1-213ENST00000496037 C9orf131Q5VYM1 1079 aa13.93□□□□□ -0.18
SMARCAL1-213ENST00000496037 MIER1Q8N108 512 aa13.93□□□□□ -0.18
SMARCAL1-213ENST00000496037 RRAGCQ9HB90 399 aa13.92□□□□□ -0.18
SMARCAL1-213ENST00000496037 TNRC6CQ9HCJ0 1690 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms