RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 CABLES1Q8TDN4 633 aa6.72□□□□□ -1.33
VPS52-222ENST00000495981 DDX17Q92841 729 aaKnown RBP6.72□□□□□ -1.33
VPS52-222ENST00000495981 ERBINQ96RT1 1412 aa6.72□□□□□ -1.33
VPS52-222ENST00000495981 ADGRB3O60242 1522 aa6.71□□□□□ -1.33
VPS52-222ENST00000495981 ATAD2Q6PL18 1390 aa6.71□□□□□ -1.33
VPS52-222ENST00000495981 CEP350Q5VT06 3117 aa6.71□□□□□ -1.34
VPS52-222ENST00000495981 PSDA5PKW4 1024 aaPredicted RBP6.71□□□□□ -1.34
VPS52-222ENST00000495981 AP1G2O75843 785 aa6.71□□□□□ -1.34
VPS52-222ENST00000495981 GZF1Q9H116 711 aaPredicted RBP6.71□□□□□ -1.34
VPS52-222ENST00000495981 ARHGAP31Q2M1Z3 1444 aa6.7□□□□□ -1.34
VPS52-222ENST00000495981 DDX11L8A8MPP1 907 aa6.7□□□□□ -1.34
VPS52-222ENST00000495981 HOXB3P14651 431 aaPredicted RBP6.7□□□□□ -1.34
VPS52-222ENST00000495981 CFAP70Q5T0N1 1121 aa6.7□□□□□ -1.34
VPS52-222ENST00000495981 BRINP3Q76B58 766 aa6.7□□□□□ -1.34
VPS52-222ENST00000495981 TMEM134Q9H6X4 195 aa6.7□□□□□ -1.34
VPS52-222ENST00000495981 HMX1Q9NP08 348 aaPredicted RBP6.7□□□□□ -1.34
VPS52-222ENST00000495981 MTMR7Q9Y216 660 aa6.7□□□□□ -1.34
VPS52-222ENST00000495981 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
VPS52-222ENST00000495981 MSH6P52701 1360 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 TMEM2Q9UHN6 1383 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 UNC13BO14795 1591 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 ABCC5O15440 1437 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 ADGRL2O95490 1459 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 ADAMTS2O95450 1211 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 YY1P25490 414 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 ARSIQ5FYB1 569 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 NUDT18Q6ZVK8 323 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 NUTM1Q86Y26 1132 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 FAM163AQ96GL9 167 aaPredicted RBP6.69□□□□□ -1.34
VPS52-222ENST00000495981 TRIM34Q9BYJ4 488 aa6.69□□□□□ -1.34
VPS52-222ENST00000495981 DAPK1P53355 1430 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 GCC2Q8IWJ2 1684 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 DNAJB2P25686 324 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 MFAP1P55081 439 aaKnown RBP6.68□□□□□ -1.34
VPS52-222ENST00000495981 DOK7Q18PE1 504 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 HDGFL1Q5TGJ6 251 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 TMCO4Q5TGY1 634 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 PRPF38BQ5VTL8 546 aaKnown RBP6.68□□□□□ -1.34
VPS52-222ENST00000495981 GPR153Q6NV75 609 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 SULF1Q8IWU6 871 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 PBXIP1Q96AQ6 731 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 MYO5BQ9ULV0 1848 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 DIP2AQ14689 1571 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 KIF15Q9NS87 1388 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 TET3O43151 1660 aa6.68□□□□□ -1.34
VPS52-222ENST00000495981 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.67□□□□□ -1.34
VPS52-222ENST00000495981 NGLY1Q96IV0 654 aa6.67□□□□□ -1.34
VPS52-222ENST00000495981 BCL2L12Q9HB09 334 aa6.67□□□□□ -1.34
VPS52-222ENST00000495981 PCDHGC3Q9UN70 934 aa6.67□□□□□ -1.34
VPS52-222ENST00000495981 EID1Q9Y6B2 187 aa6.67□□□□□ -1.34
VPS52-222ENST00000495981 IDI1Q13907 227 aa6.66□□□□□ -1.34
VPS52-222ENST00000495981 WWC1Q8IX03 1113 aa6.66□□□□□ -1.34
VPS52-222ENST00000495981 TATDN2Q93075 761 aa6.66□□□□□ -1.34
VPS52-222ENST00000495981 NDUFB9Q9Y6M9 179 aa6.66□□□□□ -1.34
VPS52-222ENST00000495981 NOS1P29475 1434 aa6.66□□□□□ -1.34
VPS52-222ENST00000495981 NKTRP30414 1462 aaKnown RBP6.66□□□□□ -1.34
VPS52-222ENST00000495981 BCL9LQ86UU0 1499 aa6.66□□□□□ -1.34
VPS52-222ENST00000495981 CARNS1A5YM72 827 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 PPP1R3GB7ZBB8 358 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 RIMBP2O15034 1052 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 HOXA2O43364 376 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 ST18O60284 1047 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 KDM4AO75164 1064 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 CTDSPL2Q05D32 466 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 FOXD4L5Q5VV16 416 aaPredicted RBP6.65□□□□□ -1.34
VPS52-222ENST00000495981 CCDC125Q86Z20 511 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 FOXD4L4Q8WXT5 416 aaPredicted RBP6.65□□□□□ -1.34
VPS52-222ENST00000495981 HLA-CQ95604 372 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 ZNF428Q96B54 188 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 USP21Q9UK80 565 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 LHX6Q9UPM6 363 aa6.65□□□□□ -1.34
VPS52-222ENST00000495981 PNPLA6Q8IY17 1366 aa6.65□□□□□ -1.35
VPS52-222ENST00000495981 SETD5Q9C0A6 1442 aa6.65□□□□□ -1.35
VPS52-222ENST00000495981 TMEM131LA2VDJ0 1609 aa6.65□□□□□ -1.35
VPS52-222ENST00000495981 AHDC1Q5TGY3 1603 aaPredicted RBP6.65□□□□□ -1.35
VPS52-222ENST00000495981 IQGAP3Q86VI3 1631 aa6.65□□□□□ -1.35
VPS52-222ENST00000495981 CFAP65Q6ZU64 1925 aaKnown RBP6.64□□□□□ -1.35
VPS52-222ENST00000495981 TRIM6-TRIM34B2RNG4 842 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 GCGRP47871 477 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 GUCA2AQ02747 115 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 KANK4Q5T7N3 995 aaPredicted RBP6.64□□□□□ -1.35
VPS52-222ENST00000495981 RSPH4AQ5TD94 716 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 UCN2Q96RP3 112 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 PPP1R12CQ9BZL4 782 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 ALG2Q9H553 416 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 ZBTB3Q9H5J0 574 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 PRM3Q9NNZ6 103 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 PNMA3Q9UL41 463 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 USTQ9Y2C2 406 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 ACIN1Q9UKV3 1341 aaKnown RBP6.64□□□□□ -1.35
VPS52-222ENST00000495981 ATRNO75882 1429 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 ZFYVE9O95405 1425 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 RPRD2Q5VT52 1461 aaKnown RBP6.64□□□□□ -1.35
VPS52-222ENST00000495981 E9PCH4 1651 aa6.64□□□□□ -1.35
VPS52-222ENST00000495981 NBPF26B4DH59 902 aa6.63□□□□□ -1.35
VPS52-222ENST00000495981 SMAPO00193 183 aa6.63□□□□□ -1.35
VPS52-222ENST00000495981 BRD1O95696 1058 aa6.63□□□□□ -1.35
VPS52-222ENST00000495981 RFX1P22670 979 aa6.63□□□□□ -1.35
VPS52-222ENST00000495981 VAC14Q08AM6 782 aa6.63□□□□□ -1.35
VPS52-222ENST00000495981 C19orf44Q9H6X5 657 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms