RNA–Protein interactions for RNA: ENST00000495904.1

VSTM2A-207, Transcript of V-set and transmembrane domain containing 2A, humanhuman

TSL 3

Gene VSTM2A, Length 865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM2A-207ENST00000495904 TATP17735 454 aaPredicted RBP28.82■■■□□ 2.2
VSTM2A-207ENST00000495904 USHBP1Q8N6Y0 703 aa28.82■■■□□ 2.2
VSTM2A-207ENST00000495904 IGSF1Q8N6C5 1336 aa28.82■■■□□ 2.2
VSTM2A-207ENST00000495904 PLEKHG2Q9H7P9 1386 aa28.81■■■□□ 2.2
VSTM2A-207ENST00000495904 DIAPH1O60610 1272 aaKnown RBP28.81■■■□□ 2.2
VSTM2A-207ENST00000495904 OVOS2A0A0G2JMS6 1433 aa28.8■■■□□ 2.2
VSTM2A-207ENST00000495904 IL13P35225 146 aa28.8■■■□□ 2.2
VSTM2A-207ENST00000495904 R3HDM1Q15032 1099 aaKnown RBP28.79■■■□□ 2.2
VSTM2A-207ENST00000495904 LRP5O75197 1615 aa28.78■■■□□ 2.2
VSTM2A-207ENST00000495904 MEGF6O75095 1541 aa28.78■■■□□ 2.2
VSTM2A-207ENST00000495904 RGPD2P0DJD1 1756 aa28.76■■■□□ 2.19
VSTM2A-207ENST00000495904 ZCRB1Q8TBF4 217 aaKnown RBP28.76■■■□□ 2.19
VSTM2A-207ENST00000495904 COL3A1P02461 1466 aaPredicted RBP28.74■■■□□ 2.19
VSTM2A-207ENST00000495904 NUDCQ9Y266 331 aa28.74■■■□□ 2.19
VSTM2A-207ENST00000495904 BCL9O00512 1426 aa28.74■■■□□ 2.19
VSTM2A-207ENST00000495904 MARCH10Q8NA82 808 aaPredicted RBP28.73■■■□□ 2.19
VSTM2A-207ENST00000495904 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.73■■■□□ 2.19
VSTM2A-207ENST00000495904 MYBBP1AQ9BQG0 1328 aaKnown RBP28.72■■■□□ 2.19
VSTM2A-207ENST00000495904 NBPF14Q5TI25 921 aa28.72■■■□□ 2.19
VSTM2A-207ENST00000495904 PLSCR1O15162 318 aa28.71■■■□□ 2.19
VSTM2A-207ENST00000495904 SPG7Q9UQ90 795 aa28.71■■■□□ 2.19
VSTM2A-207ENST00000495904 KDRP35968 1356 aa28.71■■■□□ 2.19
VSTM2A-207ENST00000495904 RREB1Q92766 1687 aa28.7■■■□□ 2.19
VSTM2A-207ENST00000495904 PCDH11XQ9BZA7 1347 aa28.7■■■□□ 2.19
VSTM2A-207ENST00000495904 PCDH11YQ9BZA8 1340 aa28.7■■■□□ 2.19
VSTM2A-207ENST00000495904 SULT6B1Q6IMI4 303 aa28.7■■■□□ 2.18
VSTM2A-207ENST00000495904 BCL11BQ9C0K0 894 aaPredicted RBP28.7■■■□□ 2.18
VSTM2A-207ENST00000495904 PRKRIP1Q9H875 184 aaPredicted RBP28.7■■■□□ 2.18
VSTM2A-207ENST00000495904 SBF2Q86WG5 1849 aa28.69■■■□□ 2.18
VSTM2A-207ENST00000495904 DDX54Q8TDD1 881 aaKnown RBP28.68■■■□□ 2.18
VSTM2A-207ENST00000495904 U2SURPO15042 1029 aaKnown RBP28.67■■■□□ 2.18
VSTM2A-207ENST00000495904 AMOTQ4VCS5 1084 aa28.66■■■□□ 2.18
VSTM2A-207ENST00000495904 AEBP1Q8IUX7 1158 aa28.65■■■□□ 2.18
VSTM2A-207ENST00000495904 NUP188Q5SRE5 1749 aa28.65■■■□□ 2.18
VSTM2A-207ENST00000495904 PLEKHO1Q53GL0 409 aaPredicted RBP28.64■■■□□ 2.18
VSTM2A-207ENST00000495904 RGPD3A6NKT7 1758 aaPredicted RBP28.62■■■□□ 2.17
VSTM2A-207ENST00000495904 RGPD4Q7Z3J3 1758 aa28.62■■■□□ 2.17
VSTM2A-207ENST00000495904 PKD1L3Q7Z443 1732 aa28.61■■■□□ 2.17
VSTM2A-207ENST00000495904 ANP32CO43423 234 aa28.61■■■□□ 2.17
VSTM2A-207ENST00000495904 HMOX1P09601 288 aa28.61■■■□□ 2.17
VSTM2A-207ENST00000495904 U2AF1L5P0DN76 240 aaPredicted RBP28.59■■■□□ 2.17
VSTM2A-207ENST00000495904 U2AF1Q01081 240 aaKnown RBP eCLIP28.59■■■□□ 2.17
VSTM2A-207ENST00000495904 PTF1AQ7RTS3 328 aa28.59■■■□□ 2.17
VSTM2A-207ENST00000495904 IFNL2Q8IZJ0 200 aa28.59■■■□□ 2.17
VSTM2A-207ENST00000495904 CYP27B1O15528 508 aa28.57■■■□□ 2.16
VSTM2A-207ENST00000495904 HSP90AB1P08238 724 aaKnown RBP28.56■■■□□ 2.16
VSTM2A-207ENST00000495904 SHANK3Q9BYB0 1731 aa28.55■■■□□ 2.16
VSTM2A-207ENST00000495904 NKX1-1Q15270 411 aaPredicted RBP28.55■■■□□ 2.16
VSTM2A-207ENST00000495904 FCHSD2O94868 740 aa28.54■■■□□ 2.16
VSTM2A-207ENST00000495904 PHKG2P15735 406 aa28.54■■■□□ 2.16
VSTM2A-207ENST00000495904 ZNF530Q6P9A1 599 aaPredicted RBP28.54■■■□□ 2.16
VSTM2A-207ENST00000495904 PROM2Q8N271 834 aa28.54■■■□□ 2.16
VSTM2A-207ENST00000495904 C1orf141Q5JVX7 400 aa28.53■■■□□ 2.16
VSTM2A-207ENST00000495904 ACSBG1Q96GR2 724 aa28.51■■■□□ 2.15
VSTM2A-207ENST00000495904 RSPH6AQ9H0K4 717 aa28.51■■■□□ 2.15
VSTM2A-207ENST00000495904 PNNQ9H307 717 aaKnown RBP28.51■■■□□ 2.15
VSTM2A-207ENST00000495904 KCNQ2O43526 872 aa28.5■■■□□ 2.15
VSTM2A-207ENST00000495904 PRKAR2BP31323 418 aa28.5■■■□□ 2.15
VSTM2A-207ENST00000495904 NHSQ6T4R5 1651 aa28.49■■■□□ 2.15
VSTM2A-207ENST00000495904 NEFMP07197 916 aa28.49■■■□□ 2.15
VSTM2A-207ENST00000495904 TXNRD1Q16881 649 aa28.49■■■□□ 2.15
VSTM2A-207ENST00000495904 GAS2L2Q8NHY3 880 aa28.49■■■□□ 2.15
VSTM2A-207ENST00000495904 SPON1Q9HCB6 807 aa28.49■■■□□ 2.15
VSTM2A-207ENST00000495904 DCAF5Q96JK2 942 aa28.48■■■□□ 2.15
VSTM2A-207ENST00000495904 PRIM1P49642 420 aaKnown RBP28.47■■■□□ 2.15
VSTM2A-207ENST00000495904 AKAP4Q5JQC9 854 aa28.47■■■□□ 2.15
VSTM2A-207ENST00000495904 SYTL4Q96C24 671 aaPredicted RBP28.47■■■□□ 2.15
VSTM2A-207ENST00000495904 WDR43Q15061 677 aaKnown RBP eCLIP28.46■■■□□ 2.15
VSTM2A-207ENST00000495904 ANO8Q9HCE9 1232 aaPredicted RBP28.46■■■□□ 2.15
VSTM2A-207ENST00000495904 MTHFSDQ2M296 383 aaKnown RBP28.44■■■□□ 2.14
VSTM2A-207ENST00000495904 DOT1LQ8TEK3 1739 aa28.43■■■□□ 2.14
VSTM2A-207ENST00000495904 ERVV-2B6SEH9 535 aa28.42■■■□□ 2.14
VSTM2A-207ENST00000495904 STK32BQ9NY57 414 aa28.42■■■□□ 2.14
VSTM2A-207ENST00000495904 KAT6BQ8WYB5 2073 aa28.41■■■□□ 2.14
VSTM2A-207ENST00000495904 SLC15A2Q16348 729 aa28.4■■■□□ 2.14
VSTM2A-207ENST00000495904 TMOD3Q9NYL9 352 aa28.39■■■□□ 2.14
VSTM2A-207ENST00000495904 MAPK8IP3Q9UPT6 1336 aa28.39■■■□□ 2.13
VSTM2A-207ENST00000495904 MPRIPQ6WCQ1 1025 aa28.38■■■□□ 2.13
VSTM2A-207ENST00000495904 PHACTR3Q96KR7 559 aa28.38■■■□□ 2.13
VSTM2A-207ENST00000495904 PPP1R1BQ9UD71 204 aaPredicted RBP28.38■■■□□ 2.13
VSTM2A-207ENST00000495904 MAP3K5Q99683 1374 aa28.37■■■□□ 2.13
VSTM2A-207ENST00000495904 KDM6AO15550 1401 aaPredicted RBP28.37■■■□□ 2.13
VSTM2A-207ENST00000495904 GNAT3A8MTJ3 354 aa28.37■■■□□ 2.13
VSTM2A-207ENST00000495904 CABP4P57796 275 aa28.35■■■□□ 2.13
VSTM2A-207ENST00000495904 SMARCC1Q92922 1105 aaPredicted RBP28.35■■■□□ 2.13
VSTM2A-207ENST00000495904 PLEKHF1Q96S99 279 aa28.35■■■□□ 2.13
VSTM2A-207ENST00000495904 CASZ1Q86V15 1759 aa28.34■■■□□ 2.13
VSTM2A-207ENST00000495904 BTAF1O14981 1849 aa28.34■■■□□ 2.13
VSTM2A-207ENST00000495904 MRS2Q9HD23 443 aa28.34■■■□□ 2.13
VSTM2A-207ENST00000495904 TOGARAM1Q9Y4F4 1720 aa28.34■■■□□ 2.13
VSTM2A-207ENST00000495904 PIGBQ92521 554 aa28.33■■■□□ 2.13
VSTM2A-207ENST00000495904 RNMTO43148 476 aaKnown RBP28.32■■■□□ 2.12
VSTM2A-207ENST00000495904 HMGB2P26583 209 aaKnown RBP28.32■■■□□ 2.12
VSTM2A-207ENST00000495904 PDGFDQ9GZP0 370 aaPredicted RBP28.32■■■□□ 2.12
VSTM2A-207ENST00000495904 HTATSF1O43719 755 aaKnown RBP28.31■■■□□ 2.12
VSTM2A-207ENST00000495904 SLC27A3Q5K4L6 730 aa28.31■■■□□ 2.12
VSTM2A-207ENST00000495904 RTF1Q92541 710 aaKnown RBP28.31■■■□□ 2.12
VSTM2A-207ENST00000495904 ADAMTS8Q9UP79 889 aa28.31■■■□□ 2.12
VSTM2A-207ENST00000495904 SLC52A2Q9HAB3 445 aa28.29■■■□□ 2.12
VSTM2A-207ENST00000495904 PALLDQ8WX93 1383 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms