RNA–Protein interactions for RNA: ENST00000495288.5

PSMB4-206, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 986 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-206ENST00000495288 IL16Q14005 1332 aa22.83■■□□□ 1.25
PSMB4-206ENST00000495288 NCAPD2Q15021 1401 aa22.83■■□□□ 1.25
PSMB4-206ENST00000495288 GNAT3A8MTJ3 354 aa22.83■■□□□ 1.25
PSMB4-206ENST00000495288 ZNF530Q6P9A1 599 aaPredicted RBP22.83■■□□□ 1.25
PSMB4-206ENST00000495288 CARD10Q9BWT7 1032 aa22.83■■□□□ 1.25
PSMB4-206ENST00000495288 COL14A1Q05707 1796 aaKnown RBP22.82■■□□□ 1.24
PSMB4-206ENST00000495288 HTATSF1O43719 755 aaKnown RBP22.8■■□□□ 1.24
PSMB4-206ENST00000495288 USP35Q9P2H5 1018 aa22.8■■□□□ 1.24
PSMB4-206ENST00000495288 RCAN3Q9UKA8 241 aa22.8■■□□□ 1.24
PSMB4-206ENST00000495288 FAM208AQ9UK61 1670 aaKnown RBP22.79■■□□□ 1.24
PSMB4-206ENST00000495288 GNAI1P63096 354 aa22.79■■□□□ 1.24
PSMB4-206ENST00000495288 C1orf141Q5JVX7 400 aa22.79■■□□□ 1.24
PSMB4-206ENST00000495288 TSR2Q969E8 191 aaKnown RBP22.79■■□□□ 1.24
PSMB4-206ENST00000495288 SPG7Q9UQ90 795 aa22.79■■□□□ 1.24
PSMB4-206ENST00000495288 DLG5Q8TDM6 1919 aa22.78■■□□□ 1.24
PSMB4-206ENST00000495288 MAP3K5Q99683 1374 aa22.78■■□□□ 1.24
PSMB4-206ENST00000495288 NGLY1Q96IV0 654 aa22.78■■□□□ 1.24
PSMB4-206ENST00000495288 SPATA31A6Q5VVP1 1343 aa22.78■■□□□ 1.24
PSMB4-206ENST00000495288 AKAP4Q5JQC9 854 aa22.77■■□□□ 1.24
PSMB4-206ENST00000495288 IFT57Q9NWB7 429 aa22.77■■□□□ 1.24
PSMB4-206ENST00000495288 C8orf37Q96NL8 207 aa22.76■■□□□ 1.23
PSMB4-206ENST00000495288 FANCIQ9NVI1 1328 aa22.76■■□□□ 1.23
PSMB4-206ENST00000495288 CRB1P82279 1406 aa22.75■■□□□ 1.23
PSMB4-206ENST00000495288 IL2RBP14784 551 aa22.75■■□□□ 1.23
PSMB4-206ENST00000495288 MEX3CQ5U5Q3 659 aaKnown RBP22.75■■□□□ 1.23
PSMB4-206ENST00000495288 IL17REQ8NFR9 667 aa22.75■■□□□ 1.23
PSMB4-206ENST00000495288 GTF3C3Q9Y5Q9 886 aa22.75■■□□□ 1.23
PSMB4-206ENST00000495288 MEGF6O75095 1541 aa22.74■■□□□ 1.23
PSMB4-206ENST00000495288 NEFLP07196 543 aa22.74■■□□□ 1.23
PSMB4-206ENST00000495288 EXOSC9Q06265 439 aaKnown RBP22.74■■□□□ 1.23
PSMB4-206ENST00000495288 MPRIPQ6WCQ1 1025 aa22.74■■□□□ 1.23
PSMB4-206ENST00000495288 CFAP44Q96MT7 982 aa22.74■■□□□ 1.23
PSMB4-206ENST00000495288 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.74■■□□□ 1.23
PSMB4-206ENST00000495288 ZNF853P0CG23 659 aa22.73■■□□□ 1.23
PSMB4-206ENST00000495288 CCDC9Q9Y3X0 531 aaKnown RBP22.73■■□□□ 1.23
PSMB4-206ENST00000495288 ZCRB1Q8TBF4 217 aaKnown RBP22.72■■□□□ 1.23
PSMB4-206ENST00000495288 LGR6Q9HBX8 967 aa22.72■■□□□ 1.23
PSMB4-206ENST00000495288 MBIPQ9NS73 344 aa22.72■■□□□ 1.23
PSMB4-206ENST00000495288 MIS18AQ9NYP9 233 aa22.71■■□□□ 1.23
PSMB4-206ENST00000495288 IFNL2Q8IZJ0 200 aa22.7■■□□□ 1.22
PSMB4-206ENST00000495288 PLCH1Q4KWH8 1693 aa22.69■■□□□ 1.22
PSMB4-206ENST00000495288 CHL1O00533 1208 aa22.69■■□□□ 1.22
PSMB4-206ENST00000495288 RNMTO43148 476 aaKnown RBP22.69■■□□□ 1.22
PSMB4-206ENST00000495288 PHKG2P15735 406 aa22.69■■□□□ 1.22
PSMB4-206ENST00000495288 TAF7Q15545 349 aaPredicted RBP22.68■■□□□ 1.22
PSMB4-206ENST00000495288 UNC5CLQ8IV45 518 aa22.68■■□□□ 1.22
PSMB4-206ENST00000495288 OVOS2A0A0G2JMS6 1433 aa22.67■■□□□ 1.22
PSMB4-206ENST00000495288 IRX6P78412 446 aaPredicted RBP22.67■■□□□ 1.22
PSMB4-206ENST00000495288 TEFQ10587 303 aa22.67■■□□□ 1.22
PSMB4-206ENST00000495288 DDX54Q8TDD1 881 aaKnown RBP22.67■■□□□ 1.22
PSMB4-206ENST00000495288 TSPYL4Q9UJ04 414 aa22.67■■□□□ 1.22
PSMB4-206ENST00000495288 CYP27B1O15528 508 aa22.66■■□□□ 1.22
PSMB4-206ENST00000495288 FKBP8Q14318 412 aa22.66■■□□□ 1.22
PSMB4-206ENST00000495288 LRP6O75581 1613 aa22.66■■□□□ 1.22
PSMB4-206ENST00000495288 SLIT2O94813 1529 aa22.66■■□□□ 1.22
PSMB4-206ENST00000495288 PLEKHG2Q9H7P9 1386 aa22.65■■□□□ 1.22
PSMB4-206ENST00000495288 SPATA31A1Q5TZJ5 1347 aa22.65■■□□□ 1.22
PSMB4-206ENST00000495288 ELL2O00472 640 aaPredicted RBP22.64■■□□□ 1.21
PSMB4-206ENST00000495288 HSP90AB1P08238 724 aaKnown RBP22.64■■□□□ 1.21
PSMB4-206ENST00000495288 FNBP4Q8N3X1 1017 aaPredicted RBP22.64■■□□□ 1.21
PSMB4-206ENST00000495288 USP21Q9UK80 565 aa22.64■■□□□ 1.21
PSMB4-206ENST00000495288 SPATA31A5Q5VU36 1347 aa22.63■■□□□ 1.21
PSMB4-206ENST00000495288 SPATA31A7Q8IWB4 1347 aa22.63■■□□□ 1.21
PSMB4-206ENST00000495288 PCDH11XQ9BZA7 1347 aa22.63■■□□□ 1.21
PSMB4-206ENST00000495288 PCDH11YQ9BZA8 1340 aa22.63■■□□□ 1.21
PSMB4-206ENST00000495288 CT47B1P0C2W7 299 aaPredicted RBP22.63■■□□□ 1.21
PSMB4-206ENST00000495288 RRP1P56182 461 aaKnown RBP22.63■■□□□ 1.21
PSMB4-206ENST00000495288 BCAR3O75815 825 aa22.62■■□□□ 1.21
PSMB4-206ENST00000495288 C8orf58Q8NAV2 365 aa22.62■■□□□ 1.21
PSMB4-206ENST00000495288 THRAP3Q9Y2W1 955 aaKnown RBP22.62■■□□□ 1.21
PSMB4-206ENST00000495288 PARP4Q9UKK3 1724 aaKnown RBP22.62■■□□□ 1.21
PSMB4-206ENST00000495288 CEMIPQ8WUJ3 1361 aa22.62■■□□□ 1.21
PSMB4-206ENST00000495288 RNF123Q5XPI4 1314 aa22.61■■□□□ 1.21
PSMB4-206ENST00000495288 EXOC5O00471 708 aa22.61■■□□□ 1.21
PSMB4-206ENST00000495288 RARSP54136 660 aaKnown RBP22.61■■□□□ 1.21
PSMB4-206ENST00000495288 VPS72Q15906 364 aa22.61■■□□□ 1.21
PSMB4-206ENST00000495288 NRAPQ86VF7 1730 aa22.61■■□□□ 1.21
PSMB4-206ENST00000495288 DCAF5Q96JK2 942 aa22.61■■□□□ 1.21
PSMB4-206ENST00000495288 BABAM1Q9NWV8 329 aa22.61■■□□□ 1.21
PSMB4-206ENST00000495288 NWD2Q9ULI1 1742 aa22.61■■□□□ 1.21
PSMB4-206ENST00000495288 PLIN1O60240 522 aa22.6■■□□□ 1.21
PSMB4-206ENST00000495288 TSPYL6Q8N831 410 aa22.6■■□□□ 1.21
PSMB4-206ENST00000495288 CDCA7Q9BWT1 371 aaPredicted RBP22.6■■□□□ 1.21
PSMB4-206ENST00000495288 BTBD11A6QL63 1104 aa22.59■■□□□ 1.21
PSMB4-206ENST00000495288 TWISTNBQ3B726 338 aaPredicted RBP22.59■■□□□ 1.21
PSMB4-206ENST00000495288 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.59■■□□□ 1.21
PSMB4-206ENST00000495288 PKD1L3Q7Z443 1732 aa22.59■■□□□ 1.21
PSMB4-206ENST00000495288 BCL9LQ86UU0 1499 aa22.59■■□□□ 1.21
PSMB4-206ENST00000495288 AFF2P51816 1311 aa22.58■■□□□ 1.21
PSMB4-206ENST00000495288 VAMP4O75379 141 aa22.58■■□□□ 1.21
PSMB4-206ENST00000495288 BCL2L13Q9BXK5 485 aa22.58■■□□□ 1.21
PSMB4-206ENST00000495288 DISP2A7MBM2 1401 aa22.57■■□□□ 1.2
PSMB4-206ENST00000495288 CABP4P57796 275 aa22.57■■□□□ 1.2
PSMB4-206ENST00000495288 KRT24Q2M2I5 525 aa22.57■■□□□ 1.2
PSMB4-206ENST00000495288 NFATC2IPQ8NCF5 419 aa22.56■■□□□ 1.2
PSMB4-206ENST00000495288 SLC52A2Q9HAB3 445 aa22.56■■□□□ 1.2
PSMB4-206ENST00000495288 SMC4Q9NTJ3 1288 aa22.56■■□□□ 1.2
PSMB4-206ENST00000495288 LRRC37A3O60309 1634 aa22.56■■□□□ 1.2
PSMB4-206ENST00000495288 KDM6AO15550 1401 aaPredicted RBP22.56■■□□□ 1.2
PSMB4-206ENST00000495288 CANXP27824 592 aaKnown RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms