RNA–Protein interactions for RNA: ENST00000495071.6

SUPT20H-222, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,669 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-222ENST00000495071 REC8O95072 547 aa16.52■□□□□ 0.24
SUPT20H-222ENST00000495071 USP26Q9BXU7 913 aa16.52■□□□□ 0.24
SUPT20H-222ENST00000495071 MAP2P11137 1827 aaKnown RBP16.52■□□□□ 0.24
SUPT20H-222ENST00000495071 RTF1Q92541 710 aaKnown RBP16.52■□□□□ 0.23
SUPT20H-222ENST00000495071 AATKQ6ZMQ8 1374 aa16.52■□□□□ 0.23
SUPT20H-222ENST00000495071 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.51■□□□□ 0.23
SUPT20H-222ENST00000495071 CAVIN1Q6NZI2 390 aaKnown RBP16.51■□□□□ 0.23
SUPT20H-222ENST00000495071 UBE2Q2Q8WVN8 375 aa16.51■□□□□ 0.23
SUPT20H-222ENST00000495071 KLHL40Q2TBA0 621 aa16.5■□□□□ 0.23
SUPT20H-222ENST00000495071 FOXD4L5Q5VV16 416 aaPredicted RBP16.5■□□□□ 0.23
SUPT20H-222ENST00000495071 FOXD4L4Q8WXT5 416 aaPredicted RBP16.5■□□□□ 0.23
SUPT20H-222ENST00000495071 MSH6P52701 1360 aa16.5■□□□□ 0.23
SUPT20H-222ENST00000495071 CPSF1Q10570 1443 aaKnown RBP16.5■□□□□ 0.23
SUPT20H-222ENST00000495071 METP08581 1390 aa16.5■□□□□ 0.23
SUPT20H-222ENST00000495071 HDGFP51858 240 aaKnown RBP16.5■□□□□ 0.23
SUPT20H-222ENST00000495071 KIF24Q5T7B8 1368 aa16.49■□□□□ 0.23
SUPT20H-222ENST00000495071 F6X3S4 739 aa16.49■□□□□ 0.23
SUPT20H-222ENST00000495071 HSP90AB2PQ58FF8 381 aa16.49■□□□□ 0.23
SUPT20H-222ENST00000495071 TSPYL4Q9UJ04 414 aa16.49■□□□□ 0.23
SUPT20H-222ENST00000495071 CHL1O00533 1208 aa16.48■□□□□ 0.23
SUPT20H-222ENST00000495071 A2ML1A8K2U0 1454 aa16.48■□□□□ 0.23
SUPT20H-222ENST00000495071 PTPRCP08575 1304 aa16.48■□□□□ 0.23
SUPT20H-222ENST00000495071 ERC2O15083 957 aa16.48■□□□□ 0.23
SUPT20H-222ENST00000495071 PRPF40AO75400 957 aaKnown RBP16.47■□□□□ 0.23
SUPT20H-222ENST00000495071 CCDC173Q0VFZ6 552 aa16.47■□□□□ 0.23
SUPT20H-222ENST00000495071 PKP1Q13835 747 aa16.47■□□□□ 0.23
SUPT20H-222ENST00000495071 ERBB4Q15303 1308 aa16.47■□□□□ 0.23
SUPT20H-222ENST00000495071 ZGPATQ8N5A5 531 aaKnown RBP16.47■□□□□ 0.23
SUPT20H-222ENST00000495071 RICTORQ6R327 1708 aa16.47■□□□□ 0.23
SUPT20H-222ENST00000495071 RTL1A6NKG5 1358 aa16.47■□□□□ 0.23
SUPT20H-222ENST00000495071 NOL8Q76FK4 1167 aaKnown RBP16.46■□□□□ 0.23
SUPT20H-222ENST00000495071 STK31Q9BXU1 1019 aa16.46■□□□□ 0.23
SUPT20H-222ENST00000495071 CWC22Q9HCG8 908 aaKnown RBP16.46■□□□□ 0.23
SUPT20H-222ENST00000495071 EXOC6BQ9Y2D4 811 aa16.46■□□□□ 0.23
SUPT20H-222ENST00000495071 DLC1Q96QB1 1528 aa16.46■□□□□ 0.22
SUPT20H-222ENST00000495071 CPS1P31327 1500 aa16.45■□□□□ 0.22
SUPT20H-222ENST00000495071 TTC21BQ7Z4L5 1316 aa16.45■□□□□ 0.22
SUPT20H-222ENST00000495071 NECTIN2Q92692 538 aa16.45■□□□□ 0.22
SUPT20H-222ENST00000495071 TRIM6-TRIM34B2RNG4 842 aa16.45■□□□□ 0.22
SUPT20H-222ENST00000495071 MSNP26038 577 aaKnown RBP16.45■□□□□ 0.22
SUPT20H-222ENST00000495071 NEK4P51957 841 aa16.45■□□□□ 0.22
SUPT20H-222ENST00000495071 TSHZ3Q63HK5 1081 aa16.45■□□□□ 0.22
SUPT20H-222ENST00000495071 PPP6R1Q9UPN7 881 aa16.45■□□□□ 0.22
SUPT20H-222ENST00000495071 ACEP12821 1306 aa16.44■□□□□ 0.22
SUPT20H-222ENST00000495071 FOXO3O43524 673 aa16.44■□□□□ 0.22
SUPT20H-222ENST00000495071 PRR36Q9H6K5 1346 aa16.44■□□□□ 0.22
SUPT20H-222ENST00000495071 G2E3Q7L622 706 aa16.44■□□□□ 0.22
SUPT20H-222ENST00000495071 RILPL2Q969X0 211 aa16.44■□□□□ 0.22
SUPT20H-222ENST00000495071 ATP10DQ9P241 1426 aa16.43■□□□□ 0.22
SUPT20H-222ENST00000495071 CCT4P50991 539 aaKnown RBP16.43■□□□□ 0.22
SUPT20H-222ENST00000495071 GNAI2P04899 355 aa16.43■□□□□ 0.22
SUPT20H-222ENST00000495071 MCCP23508 829 aa16.43■□□□□ 0.22
SUPT20H-222ENST00000495071 FKBP5Q13451 457 aaPredicted RBP16.43■□□□□ 0.22
SUPT20H-222ENST00000495071 PDE1AP54750 535 aa16.42■□□□□ 0.22
SUPT20H-222ENST00000495071 ZSCAN23Q3MJ62 389 aa16.42■□□□□ 0.22
SUPT20H-222ENST00000495071 CLEC17AQ6ZS10 378 aa16.42■□□□□ 0.22
SUPT20H-222ENST00000495071 AMPHP49418 695 aa16.42■□□□□ 0.22
SUPT20H-222ENST00000495071 ANO2Q9NQ90 1003 aa16.42■□□□□ 0.22
SUPT20H-222ENST00000495071 KIAA0232Q92628 1395 aa16.42■□□□□ 0.22
SUPT20H-222ENST00000495071 LMBRD1Q9NUN5 540 aa16.41■□□□□ 0.22
SUPT20H-222ENST00000495071 REREQ9P2R6 1566 aa16.41■□□□□ 0.22
SUPT20H-222ENST00000495071 RBM27Q9P2N5 1060 aaKnown RBP16.41■□□□□ 0.22
SUPT20H-222ENST00000495071 HSP90AA2PQ14568 343 aaPredicted RBP16.4■□□□□ 0.22
SUPT20H-222ENST00000495071 MTHFSDQ2M296 383 aaKnown RBP16.4■□□□□ 0.22
SUPT20H-222ENST00000495071 CHAMP1Q96JM3 812 aa16.4■□□□□ 0.22
SUPT20H-222ENST00000495071 LRRCC1Q9C099 1032 aa16.4■□□□□ 0.22
SUPT20H-222ENST00000495071 FOXD4L6Q3SYB3 417 aaPredicted RBP16.39■□□□□ 0.21
SUPT20H-222ENST00000495071 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
SUPT20H-222ENST00000495071 FOXD4L3Q6VB84 417 aaPredicted RBP16.39■□□□□ 0.21
SUPT20H-222ENST00000495071 ZSCAN30Q86W11 494 aa16.39■□□□□ 0.21
SUPT20H-222ENST00000495071 AK9Q5TCS8 1911 aa16.39■□□□□ 0.21
SUPT20H-222ENST00000495071 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
SUPT20H-222ENST00000495071 RGS12O14924 1447 aa16.38■□□□□ 0.21
SUPT20H-222ENST00000495071 GLIPR1L2Q4G1C9 344 aa16.38■□□□□ 0.21
SUPT20H-222ENST00000495071 ZNF445P59923 1031 aa16.38■□□□□ 0.21
SUPT20H-222ENST00000495071 DLG5Q8TDM6 1919 aa16.38■□□□□ 0.21
SUPT20H-222ENST00000495071 TMX3Q96JJ7 454 aa16.38■□□□□ 0.21
SUPT20H-222ENST00000495071 MAP3K19Q56UN5 1328 aa16.38■□□□□ 0.21
SUPT20H-222ENST00000495071 CYP2E1P05181 493 aaPredicted RBP16.37■□□□□ 0.21
SUPT20H-222ENST00000495071 GNAI3P08754 354 aa16.37■□□□□ 0.21
SUPT20H-222ENST00000495071 MX1P20591 662 aa16.37■□□□□ 0.21
SUPT20H-222ENST00000495071 PRIM1P49642 420 aaKnown RBP16.37■□□□□ 0.21
SUPT20H-222ENST00000495071 PPP1R9BQ96SB3 815 aa16.37■□□□□ 0.21
SUPT20H-222ENST00000495071 IBTKQ9P2D0 1353 aaPredicted RBP16.37■□□□□ 0.21
SUPT20H-222ENST00000495071 KNDC1Q76NI1 1749 aa16.37■□□□□ 0.21
SUPT20H-222ENST00000495071 TPRNQ4KMQ1 711 aa16.36■□□□□ 0.21
SUPT20H-222ENST00000495071 RBSNQ9H1K0 784 aa16.36■□□□□ 0.21
SUPT20H-222ENST00000495071 SYCE3A1L190 88 aa16.36■□□□□ 0.21
SUPT20H-222ENST00000495071 FLIIQ13045 1269 aa16.36■□□□□ 0.21
SUPT20H-222ENST00000495071 CCDC30Q5VVM6 783 aa16.36■□□□□ 0.21
SUPT20H-222ENST00000495071 SIRT1Q96EB6 747 aa16.36■□□□□ 0.21
SUPT20H-222ENST00000495071 SLC26A8Q96RN1 970 aa16.36■□□□□ 0.21
SUPT20H-222ENST00000495071 ROBO2Q9HCK4 1378 aa16.36■□□□□ 0.21
SUPT20H-222ENST00000495071 ESYT1Q9BSJ8 1104 aa16.35■□□□□ 0.21
SUPT20H-222ENST00000495071 MCM2P49736 904 aa16.35■□□□□ 0.21
SUPT20H-222ENST00000495071 LTV1Q96GA3 475 aaPredicted RBP16.35■□□□□ 0.21
SUPT20H-222ENST00000495071 RNF214Q8ND24 703 aa16.35■□□□□ 0.21
SUPT20H-222ENST00000495071 GPT2Q8TD30 523 aa16.35■□□□□ 0.21
SUPT20H-222ENST00000495071 UPF3BQ9BZI7 483 aaKnown RBP16.35■□□□□ 0.21
SUPT20H-222ENST00000495071 KIAA1211Q6ZU35 1233 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms