RNA–Protein interactions for RNA: ENST00000495058.5

PPP4R1L-208, Transcript of protein phosphatase 4 regulatory subunit 1 like (pseudogene), humanhuman

TSL 1 (best)

Gene PPP4R1L, Length 3,593 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1L-208ENST00000495058 LRRC7Q96NW7 1537 aa9.15□□□□□ -0.95
PPP4R1L-208ENST00000495058 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.14□□□□□ -0.95
PPP4R1L-208ENST00000495058 PIP4K2BP78356 416 aa9.14□□□□□ -0.95
PPP4R1L-208ENST00000495058 BECN1Q14457 450 aa9.14□□□□□ -0.95
PPP4R1L-208ENST00000495058 MAP3K19Q56UN5 1328 aa9.14□□□□□ -0.95
PPP4R1L-208ENST00000495058 SLC4A2P04920 1241 aa9.13□□□□□ -0.95
PPP4R1L-208ENST00000495058 FOXD4L1Q9NU39 408 aa9.13□□□□□ -0.95
PPP4R1L-208ENST00000495058 UBAP1LF5GYI3 381 aa9.13□□□□□ -0.95
PPP4R1L-208ENST00000495058 F6X3S4 739 aa9.13□□□□□ -0.95
PPP4R1L-208ENST00000495058 STK31Q9BXU1 1019 aa9.13□□□□□ -0.95
PPP4R1L-208ENST00000495058 SLAIN2Q9P270 581 aa9.13□□□□□ -0.95
PPP4R1L-208ENST00000495058 EDC4Q6P2E9 1401 aaKnown RBP9.13□□□□□ -0.95
PPP4R1L-208ENST00000495058 ATP7BP35670 1465 aa9.13□□□□□ -0.95
PPP4R1L-208ENST00000495058 ANKARQ7Z5J8 1434 aa9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 NCOA3Q9Y6Q9 1424 aa9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 VAMP4O75379 141 aa9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 FKBP5Q13451 457 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 CFAP44Q96MT7 982 aa9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 NAP1L5Q96NT1 182 aaPredicted RBP9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 PLEKHG3A1L390 1219 aa9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 TOM1O60784 492 aa9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 DDX17Q92841 729 aaKnown RBP9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 IFT57Q9NWB7 429 aa9.12□□□□□ -0.95
PPP4R1L-208ENST00000495058 CDC42BPGQ6DT37 1551 aa9.11□□□□□ -0.95
PPP4R1L-208ENST00000495058 CT47B1P0C2W7 299 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1L-208ENST00000495058 C1orf167Q5SNV9 1468 aa9.11□□□□□ -0.95
PPP4R1L-208ENST00000495058 ADGRB2O60241 1585 aa9.11□□□□□ -0.95
PPP4R1L-208ENST00000495058 CSB-PGBD3P0DP91 1061 aa9.11□□□□□ -0.95
PPP4R1L-208ENST00000495058 MTHFSDQ2M296 383 aaKnown RBP9.11□□□□□ -0.95
PPP4R1L-208ENST00000495058 SAMD1Q6SPF0 538 aaPredicted RBP9.11□□□□□ -0.95
PPP4R1L-208ENST00000495058 API5Q9BZZ5 524 aaKnown RBP9.11□□□□□ -0.95
PPP4R1L-208ENST00000495058 NALCNQ8IZF0 1738 aa9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 CD163L1Q9NR16 1453 aa9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 STRCP1A6NGW2 1772 aa9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 ZC3H6P61129 1189 aaKnown RBP9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 KRT28Q7Z3Y7 464 aa9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 USP35Q9P2H5 1018 aa9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 A0A0G2JS52 829 aa9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 EYA1Q99502 592 aa9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 DCCP43146 1447 aa9.1□□□□□ -0.95
PPP4R1L-208ENST00000495058 MST1RQ04912 1400 aa9.09□□□□□ -0.95
PPP4R1L-208ENST00000495058 NPHP3Q7Z494 1330 aa9.09□□□□□ -0.95
PPP4R1L-208ENST00000495058 BRINP3Q76B58 766 aa9.09□□□□□ -0.95
PPP4R1L-208ENST00000495058 CERKQ8TCT0 537 aa9.09□□□□□ -0.95
PPP4R1L-208ENST00000495058 IL16Q14005 1332 aa9.09□□□□□ -0.95
PPP4R1L-208ENST00000495058 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
PPP4R1L-208ENST00000495058 LRRC59Q96AG4 307 aaKnown RBP9.09□□□□□ -0.95
PPP4R1L-208ENST00000495058 CHMP4BQ9H444 224 aaKnown RBP9.09□□□□□ -0.95
PPP4R1L-208ENST00000495058 SMARCA5O60264 1052 aaPredicted RBP9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 ALDH1L2Q3SY69 923 aa9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 FRAT2O75474 233 aaPredicted RBP9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 TEFQ10587 303 aa9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 NFKBIBQ15653 356 aa9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 CHD1LQ86WJ1 897 aa9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 C22orf23Q9BZE7 217 aa9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 ZBTB40Q9NUA8 1239 aa9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 ANXA1P04083 346 aa9.08□□□□□ -0.96
PPP4R1L-208ENST00000495058 GAS2L2Q8NHY3 880 aa9.07□□□□□ -0.96
PPP4R1L-208ENST00000495058 GZF1Q9H116 711 aaPredicted RBP9.07□□□□□ -0.96
PPP4R1L-208ENST00000495058 USP6P35125 1406 aa9.07□□□□□ -0.96
PPP4R1L-208ENST00000495058 HSP90AB1P08238 724 aaKnown RBP9.07□□□□□ -0.96
PPP4R1L-208ENST00000495058 HSCBQ8IWL3 235 aa9.07□□□□□ -0.96
PPP4R1L-208ENST00000495058 MEIS3Q99687 375 aa9.07□□□□□ -0.96
PPP4R1L-208ENST00000495058 FMN2Q9NZ56 1722 aa9.07□□□□□ -0.96
PPP4R1L-208ENST00000495058 LTBP4Q8N2S1 1624 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 IQSEC2Q5JU85 1478 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 MPRIPQ6WCQ1 1025 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 G2E3Q7L622 706 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 TSHZ3Q63HK5 1081 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 NLRP2Q9NX02 1062 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 TTC21AQ8NDW8 1320 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 CPSF1Q10570 1443 aaKnown RBP9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 OS9Q13438 667 aaPredicted RBP9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 HDGFL1Q5TGJ6 251 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 C16orf71Q8IYS4 520 aaPredicted RBP9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 NAP1L2Q9ULW6 460 aaPredicted RBP9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 EXOC6BQ9Y2D4 811 aa9.06□□□□□ -0.96
PPP4R1L-208ENST00000495058 GNAT3A8MTJ3 354 aa9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 ZNF530Q6P9A1 599 aaPredicted RBP9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 PNPLA6Q8IY17 1366 aa9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 HOXC9P31274 260 aa9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 AIMP1Q12904 312 aaKnown RBP9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 TPRNQ4KMQ1 711 aa9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 C1orf141Q5JVX7 400 aa9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 NOL8Q76FK4 1167 aaKnown RBP9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 BRPF3Q9ULD4 1205 aa9.05□□□□□ -0.96
PPP4R1L-208ENST00000495058 FLT4P35916 1363 aa9.04□□□□□ -0.96
PPP4R1L-208ENST00000495058 TRIM6-TRIM34B2RNG4 842 aa9.04□□□□□ -0.96
PPP4R1L-208ENST00000495058 ZBTB7BO15156 539 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1L-208ENST00000495058 CABLES1Q8TDN4 633 aa9.04□□□□□ -0.96
PPP4R1L-208ENST00000495058 ZNF330Q9Y3S2 320 aaPredicted RBP9.04□□□□□ -0.96
PPP4R1L-208ENST00000495058 USP32Q8NFA0 1604 aa9.04□□□□□ -0.96
PPP4R1L-208ENST00000495058 GSE1Q14687 1217 aa9.04□□□□□ -0.96
PPP4R1L-208ENST00000495058 HDAC1Q13547 482 aaPredicted RBP9.03□□□□□ -0.96
PPP4R1L-208ENST00000495058 RILPL2Q969X0 211 aa9.03□□□□□ -0.96
PPP4R1L-208ENST00000495058 ITSN1Q15811 1721 aa9.03□□□□□ -0.96
PPP4R1L-208ENST00000495058 OTUD7AQ8TE49 926 aaPredicted RBP9.03□□□□□ -0.96
PPP4R1L-208ENST00000495058 HMMRO75330 724 aa9.02□□□□□ -0.96
PPP4R1L-208ENST00000495058 CHRNA2Q15822 529 aa9.02□□□□□ -0.96
PPP4R1L-208ENST00000495058 SHPRHQ149N8 1683 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms