RNA–Protein interactions for RNA: ENST00000494954.1

PNKD-208, Transcript of PNKD, MBL domain containing, humanhuman

TSL 3

Gene PNKD, Length 248 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKD-208ENST00000494954 LRRC4BQ9NT99 713 aa8.55□□□□□ -1.04
PNKD-208ENST00000494954 CD2APQ9Y5K6 639 aa8.55□□□□□ -1.04
PNKD-208ENST00000494954 PNPLA7Q6ZV29 1317 aa8.54□□□□□ -1.04
PNKD-208ENST00000494954 EXOC5O00471 708 aa8.54□□□□□ -1.04
PNKD-208ENST00000494954 KIF3CO14782 793 aa8.54□□□□□ -1.04
PNKD-208ENST00000494954 PRELPP51888 382 aa8.54□□□□□ -1.04
PNKD-208ENST00000494954 ZNF579Q8NAF0 562 aaKnown RBP8.54□□□□□ -1.04
PNKD-208ENST00000494954 TRAK1Q9UPV9 953 aa8.54□□□□□ -1.04
PNKD-208ENST00000494954 USP6P35125 1406 aa8.54□□□□□ -1.04
PNKD-208ENST00000494954 CLCN6P51797 869 aa8.53□□□□□ -1.04
PNKD-208ENST00000494954 TOM1L2Q6ZVM7 507 aa8.53□□□□□ -1.04
PNKD-208ENST00000494954 NLGN2Q8NFZ4 835 aa8.53□□□□□ -1.04
PNKD-208ENST00000494954 CDK19Q9BWU1 502 aa8.53□□□□□ -1.04
PNKD-208ENST00000494954 AXIN2Q9Y2T1 843 aa8.53□□□□□ -1.04
PNKD-208ENST00000494954 CICQ96RK0 1608 aaPredicted RBP8.53□□□□□ -1.04
PNKD-208ENST00000494954 KCNH5Q8NCM2 988 aa8.52□□□□□ -1.05
PNKD-208ENST00000494954 PCDH10Q9P2E7 1040 aa8.52□□□□□ -1.05
PNKD-208ENST00000494954 PPIP5K1Q6PFW1 1433 aa8.52□□□□□ -1.05
PNKD-208ENST00000494954 AKAP12Q02952 1782 aa8.51□□□□□ -1.05
PNKD-208ENST00000494954 TOMM70O94826 608 aa8.51□□□□□ -1.05
PNKD-208ENST00000494954 NUTM2GQ5VZR2 741 aa8.51□□□□□ -1.05
PNKD-208ENST00000494954 C10orf71Q711Q0 1435 aa8.5□□□□□ -1.05
PNKD-208ENST00000494954 DCBLD2Q96PD2 775 aa8.5□□□□□ -1.05
PNKD-208ENST00000494954 NFAT5O94916 1531 aa8.49□□□□□ -1.05
PNKD-208ENST00000494954 NLRP6P59044 892 aa8.48□□□□□ -1.05
PNKD-208ENST00000494954 COL13A1Q5TAT6 717 aaPredicted RBP8.48□□□□□ -1.05
PNKD-208ENST00000494954 KLRG1Q96E93 195 aa8.48□□□□□ -1.05
PNKD-208ENST00000494954 ERBB3P21860 1342 aa8.48□□□□□ -1.05
PNKD-208ENST00000494954 TTC21AQ8NDW8 1320 aa8.48□□□□□ -1.05
PNKD-208ENST00000494954 PIK3C2AO00443 1686 aa8.47□□□□□ -1.05
PNKD-208ENST00000494954 GALR2O43603 387 aaPredicted RBP8.47□□□□□ -1.05
PNKD-208ENST00000494954 FLAD1Q8NFF5 587 aa8.47□□□□□ -1.05
PNKD-208ENST00000494954 RBM46Q8TBY0 533 aaKnown RBP8.47□□□□□ -1.05
PNKD-208ENST00000494954 NSD2O96028 1365 aa8.47□□□□□ -1.05
PNKD-208ENST00000494954 USP31Q70CQ4 1352 aa8.47□□□□□ -1.05
PNKD-208ENST00000494954 ANKRD36BQ8N2N9 1353 aa8.47□□□□□ -1.05
PNKD-208ENST00000494954 BTAF1O14981 1849 aa8.46□□□□□ -1.06
PNKD-208ENST00000494954 IL2RBP14784 551 aa8.46□□□□□ -1.06
PNKD-208ENST00000494954 FSTL1Q12841 308 aa8.46□□□□□ -1.06
PNKD-208ENST00000494954 TFCP2L1Q9NZI6 479 aa8.46□□□□□ -1.06
PNKD-208ENST00000494954 PCNTO95613 3336 aa8.46□□□□□ -1.06
PNKD-208ENST00000494954 KIAA1210Q9ULL0 1709 aa8.46□□□□□ -1.06
PNKD-208ENST00000494954 USP54Q70EL1 1684 aa8.45□□□□□ -1.06
PNKD-208ENST00000494954 LY75O60449 1722 aa8.44□□□□□ -1.06
PNKD-208ENST00000494954 MNX1P50219 401 aaPredicted RBP8.44□□□□□ -1.06
PNKD-208ENST00000494954 PHF12Q96QT6 1004 aa8.44□□□□□ -1.06
PNKD-208ENST00000494954 QRICH2Q9H0J4 1663 aa8.43□□□□□ -1.06
PNKD-208ENST00000494954 COL23A1Q86Y22 540 aaPredicted RBP8.43□□□□□ -1.06
PNKD-208ENST00000494954 TNS4Q8IZW8 715 aa8.43□□□□□ -1.06
PNKD-208ENST00000494954 TTC21BQ7Z4L5 1316 aa8.43□□□□□ -1.06
PNKD-208ENST00000494954 PELP1Q8IZL8 1130 aaKnown RBP8.42□□□□□ -1.06
PNKD-208ENST00000494954 DCAF11Q8TEB1 546 aa8.42□□□□□ -1.06
PNKD-208ENST00000494954 CABP1Q9NZU7 370 aa8.42□□□□□ -1.06
PNKD-208ENST00000494954 NSD3Q9BZ95 1437 aa8.42□□□□□ -1.06
PNKD-208ENST00000494954 WDR90Q96KV7 1748 aa8.42□□□□□ -1.06
PNKD-208ENST00000494954 TUBGCP6Q96RT7 1819 aa8.41□□□□□ -1.06
PNKD-208ENST00000494954 PXDNLA1KZ92 1463 aa8.41□□□□□ -1.06
PNKD-208ENST00000494954 PLEKHG2Q9H7P9 1386 aa8.41□□□□□ -1.06
PNKD-208ENST00000494954 CENPJQ9HC77 1338 aaPredicted RBP8.41□□□□□ -1.06
PNKD-208ENST00000494954 CSB-PGBD3P0DP91 1061 aa8.41□□□□□ -1.06
PNKD-208ENST00000494954 ACSBG1Q96GR2 724 aa8.41□□□□□ -1.06
PNKD-208ENST00000494954 IGSF1Q8N6C5 1336 aa8.4□□□□□ -1.06
PNKD-208ENST00000494954 CGNL1Q0VF96 1302 aa8.39□□□□□ -1.07
PNKD-208ENST00000494954 ZC3H4Q9UPT8 1303 aaKnown RBP8.39□□□□□ -1.07
PNKD-208ENST00000494954 SRPK2P78362 688 aaKnown RBP8.39□□□□□ -1.07
PNKD-208ENST00000494954 SBNO2Q9Y2G9 1366 aa8.38□□□□□ -1.07
PNKD-208ENST00000494954 TGFB2P61812 414 aa8.38□□□□□ -1.07
PNKD-208ENST00000494954 KLHL34Q8N239 644 aa8.38□□□□□ -1.07
PNKD-208ENST00000494954 CCNL1Q9UK58 526 aaPredicted RBP8.38□□□□□ -1.07
PNKD-208ENST00000494954 USP47Q96K76 1375 aa8.37□□□□□ -1.07
PNKD-208ENST00000494954 PRIM1P49642 420 aaKnown RBP8.37□□□□□ -1.07
PNKD-208ENST00000494954 CABP2Q9NPB3 220 aa8.37□□□□□ -1.07
PNKD-208ENST00000494954 NLRP2Q9NX02 1062 aa8.37□□□□□ -1.07
PNKD-208ENST00000494954 FAM208AQ9UK61 1670 aaKnown RBP8.37□□□□□ -1.07
PNKD-208ENST00000494954 EVC2Q86UK5 1308 aa8.36□□□□□ -1.07
PNKD-208ENST00000494954 SSFA2P28290 1259 aa8.36□□□□□ -1.07
PNKD-208ENST00000494954 ANKRD24Q8TF21 1146 aa8.36□□□□□ -1.07
PNKD-208ENST00000494954 ZNF526Q8TF50 670 aaPredicted RBP8.36□□□□□ -1.07
PNKD-208ENST00000494954 IP6K1Q92551 441 aa8.36□□□□□ -1.07
PNKD-208ENST00000494954 WWC3Q9ULE0 1092 aa8.36□□□□□ -1.07
PNKD-208ENST00000494954 KIF13BQ9NQT8 1826 aa8.36□□□□□ -1.07
PNKD-208ENST00000494954 NMRK2Q9NPI5 230 aa8.35□□□□□ -1.07
PNKD-208ENST00000494954 KDM2BQ8NHM5 1336 aa8.34□□□□□ -1.07
PNKD-208ENST00000494954 SMC1BQ8NDV3 1235 aa8.34□□□□□ -1.07
PNKD-208ENST00000494954 PRDM10Q9NQV6 1147 aa8.34□□□□□ -1.07
PNKD-208ENST00000494954 KDM2AQ9Y2K7 1162 aa8.34□□□□□ -1.07
PNKD-208ENST00000494954 RGPD5Q99666 1765 aa8.34□□□□□ -1.07
PNKD-208ENST00000494954 KDM6AO15550 1401 aaPredicted RBP8.34□□□□□ -1.07
PNKD-208ENST00000494954 C5P01031 1676 aa8.34□□□□□ -1.08
PNKD-208ENST00000494954 MAP3K19Q56UN5 1328 aa8.33□□□□□ -1.08
PNKD-208ENST00000494954 CD163L1Q9NR16 1453 aa8.33□□□□□ -1.08
PNKD-208ENST00000494954 ZBTB7CA1YPR0 619 aa8.33□□□□□ -1.08
PNKD-208ENST00000494954 POTEB2H3BUK9 544 aa8.33□□□□□ -1.08
PNKD-208ENST00000494954 NBPF1Q3BBV0 1214 aa8.33□□□□□ -1.08
PNKD-208ENST00000494954 ZCRB1Q8TBF4 217 aaKnown RBP8.33□□□□□ -1.08
PNKD-208ENST00000494954 PUS7Q96PZ0 661 aaKnown RBP8.33□□□□□ -1.08
PNKD-208ENST00000494954 KIAA1551Q9HCM1 1747 aa8.33□□□□□ -1.08
PNKD-208ENST00000494954 TOGARAM1Q9Y4F4 1720 aa8.33□□□□□ -1.08
PNKD-208ENST00000494954 KTN1Q86UP2 1357 aaKnown RBP8.33□□□□□ -1.08
PNKD-208ENST00000494954 PALLDQ8WX93 1383 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms