RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 LRRC37A3O60309 1634 aa7.36□□□□□ -1.23
RUNX1-217ENST00000494829 FLT4P35916 1363 aa7.35□□□□□ -1.23
RUNX1-217ENST00000494829 RGPD5Q99666 1765 aa7.35□□□□□ -1.23
RUNX1-217ENST00000494829 TRPM3Q9HCF6 1732 aaPredicted RBP7.35□□□□□ -1.23
RUNX1-217ENST00000494829 PHF8Q9UPP1 1060 aa7.35□□□□□ -1.23
RUNX1-217ENST00000494829 MSH6P52701 1360 aa7.35□□□□□ -1.23
RUNX1-217ENST00000494829 TWISTNBQ3B726 338 aaPredicted RBP7.35□□□□□ -1.23
RUNX1-217ENST00000494829 ESCO1Q5FWF5 840 aa7.35□□□□□ -1.23
RUNX1-217ENST00000494829 ARHGEF10O15013 1369 aa7.35□□□□□ -1.23
RUNX1-217ENST00000494829 CHL1O00533 1208 aa7.35□□□□□ -1.23
RUNX1-217ENST00000494829 FTSJ3Q8IY81 847 aaKnown RBP7.35□□□□□ -1.23
RUNX1-217ENST00000494829 NOP58Q9Y2X3 529 aaKnown RBP7.35□□□□□ -1.23
RUNX1-217ENST00000494829 ZBTB7BO15156 539 aaPredicted RBP7.34□□□□□ -1.23
RUNX1-217ENST00000494829 LRRC59Q96AG4 307 aaKnown RBP7.34□□□□□ -1.23
RUNX1-217ENST00000494829 CT47B1P0C2W7 299 aaPredicted RBP7.34□□□□□ -1.23
RUNX1-217ENST00000494829 G2E3Q7L622 706 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 AMPHP49418 695 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 HSPA2P54652 639 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 FAM161AQ3B820 660 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 ALDH1L2Q3SY69 923 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 NBPF6Q5VWK0 638 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 C14orf37Q86TY3 774 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 NBPF4Q96M43 638 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 AXIN2Q9Y2T1 843 aa7.34□□□□□ -1.23
RUNX1-217ENST00000494829 ABCC4O15439 1325 aa7.33□□□□□ -1.24
RUNX1-217ENST00000494829 GNAI1P63096 354 aa7.33□□□□□ -1.24
RUNX1-217ENST00000494829 IL17REQ8NFR9 667 aa7.33□□□□□ -1.24
RUNX1-217ENST00000494829 XIRP1Q702N8 1843 aaKnown RBP7.33□□□□□ -1.24
RUNX1-217ENST00000494829 BRPF1P55201 1214 aaPredicted RBP7.33□□□□□ -1.24
RUNX1-217ENST00000494829 PNNQ9H307 717 aaKnown RBP7.33□□□□□ -1.24
RUNX1-217ENST00000494829 PXDNQ92626 1479 aa7.33□□□□□ -1.24
RUNX1-217ENST00000494829 FBXO3Q9UK99 471 aa7.33□□□□□ -1.24
RUNX1-217ENST00000494829 MED1Q15648 1581 aaPredicted RBP7.32□□□□□ -1.24
RUNX1-217ENST00000494829 ZBTB7CA1YPR0 619 aa7.32□□□□□ -1.24
RUNX1-217ENST00000494829 FAM208AQ9UK61 1670 aaKnown RBP7.31□□□□□ -1.24
RUNX1-217ENST00000494829 ANP32AP39687 249 aaKnown RBP7.31□□□□□ -1.24
RUNX1-217ENST00000494829 HDAC1Q13547 482 aaPredicted RBP7.31□□□□□ -1.24
RUNX1-217ENST00000494829 NECTIN2Q92692 538 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 LGR6Q9HBX8 967 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 KIF16BQ96L93 1317 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 F6X3S4 739 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 KCNQ3O43525 872 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 ALS2Q96Q42 1657 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 NBR1Q14596 966 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 SMC5Q8IY18 1101 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 DDX19BQ9UMR2 479 aa7.31□□□□□ -1.24
RUNX1-217ENST00000494829 ATP10DQ9P241 1426 aa7.3□□□□□ -1.24
RUNX1-217ENST00000494829 C1orf167Q5SNV9 1468 aa7.3□□□□□ -1.24
RUNX1-217ENST00000494829 PHRF1Q9P1Y6 1649 aaKnown RBP7.3□□□□□ -1.24
RUNX1-217ENST00000494829 SLIT3O75094 1523 aa7.3□□□□□ -1.24
RUNX1-217ENST00000494829 PSME1Q06323 249 aa7.3□□□□□ -1.24
RUNX1-217ENST00000494829 CRYBG1Q9Y4K1 1723 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 NEFMP07197 916 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 LNPKQ9C0E8 428 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 CABLES1Q8TDN4 633 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 IP6K1Q92551 441 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 STRCQ7RTU9 1775 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 MST1RQ04912 1400 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 GCP02774 474 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 PROSER2Q86WR7 435 aaPredicted RBP7.29□□□□□ -1.24
RUNX1-217ENST00000494829 MEIS3Q99687 375 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 RWDD1Q9H446 243 aaPredicted RBP7.29□□□□□ -1.24
RUNX1-217ENST00000494829 TMEM94Q12767 1356 aa7.29□□□□□ -1.24
RUNX1-217ENST00000494829 C16orf71Q8IYS4 520 aaPredicted RBP7.28□□□□□ -1.24
RUNX1-217ENST00000494829 OTUD7AQ8TE49 926 aaPredicted RBP7.28□□□□□ -1.24
RUNX1-217ENST00000494829 TSPYL4Q9UJ04 414 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 PRAMEF22A3QJZ6 481 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 NUCB1Q02818 461 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 LMOD3Q0VAK6 560 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 ARHGEF25Q86VW2 580 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 ARHGAP45Q92619 1136 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 ZBTB47Q9UFB7 747 aaPredicted RBP7.28□□□□□ -1.24
RUNX1-217ENST00000494829 KDM3BQ7LBC6 1761 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 LMOD2Q6P5Q4 547 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 CAMTA1Q9Y6Y1 1673 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 KIAA0232Q92628 1395 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 COL18A1P39060 1754 aa7.28□□□□□ -1.24
RUNX1-217ENST00000494829 KDM4FA0A1W2PPD8 638 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 SPDYE4A6NLX3 237 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 MAP3K5Q99683 1374 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 LMO7Q8WWI1 1683 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 IPO8O15397 1037 aaKnown RBP7.27□□□□□ -1.25
RUNX1-217ENST00000494829 ZC3H6P61129 1189 aaKnown RBP7.27□□□□□ -1.25
RUNX1-217ENST00000494829 KRT28Q7Z3Y7 464 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 GNAT3A8MTJ3 354 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 CALD1Q05682 793 aaKnown RBP7.27□□□□□ -1.25
RUNX1-217ENST00000494829 INTS3Q68E01 1043 aaKnown RBP7.27□□□□□ -1.25
RUNX1-217ENST00000494829 BCL11AQ9H165 835 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 CEMIPQ8WUJ3 1361 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 NCAPD2Q15021 1401 aa7.27□□□□□ -1.25
RUNX1-217ENST00000494829 RTL1A6NKG5 1358 aa7.26□□□□□ -1.25
RUNX1-217ENST00000494829 ANXA1P04083 346 aa7.26□□□□□ -1.25
RUNX1-217ENST00000494829 MPRIPQ6WCQ1 1025 aa7.26□□□□□ -1.25
RUNX1-217ENST00000494829 PHAXQ9H814 394 aaKnown RBP7.26□□□□□ -1.25
RUNX1-217ENST00000494829 ZNF428Q96B54 188 aa7.26□□□□□ -1.25
RUNX1-217ENST00000494829 SIPA1L3O60292 1781 aaPredicted RBP7.26□□□□□ -1.25
RUNX1-217ENST00000494829 KIF24Q5T7B8 1368 aa7.26□□□□□ -1.25
RUNX1-217ENST00000494829 SMARCA5O60264 1052 aaPredicted RBP7.26□□□□□ -1.25
RUNX1-217ENST00000494829 CHD1LQ86WJ1 897 aa7.26□□□□□ -1.25
RUNX1-217ENST00000494829 AAMPQ13685 434 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms