RNA–Protein interactions for RNA: ENST00000494808.1

AGAP3-224, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

TSL 2

Gene AGAP3, Length 487 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-224ENST00000494808 SHANK3Q9BYB0 1731 aa18.13■□□□□ 0.49
AGAP3-224ENST00000494808 KCNQ2O43526 872 aa18.13■□□□□ 0.49
AGAP3-224ENST00000494808 TXNRD1Q16881 649 aa18.13■□□□□ 0.49
AGAP3-224ENST00000494808 DDX54Q8TDD1 881 aaKnown RBP18.13■□□□□ 0.49
AGAP3-224ENST00000494808 ACSBG1Q96GR2 724 aa18.13■□□□□ 0.49
AGAP3-224ENST00000494808 POLKQ9UBT6 870 aa18.12■□□□□ 0.49
AGAP3-224ENST00000494808 PROM2Q8N271 834 aa18.11■□□□□ 0.49
AGAP3-224ENST00000494808 PCDH11XQ9BZA7 1347 aa18.11■□□□□ 0.49
AGAP3-224ENST00000494808 PCDH11YQ9BZA8 1340 aa18.11■□□□□ 0.49
AGAP3-224ENST00000494808 BTAF1O14981 1849 aa18.1■□□□□ 0.49
AGAP3-224ENST00000494808 PPM1GO15355 546 aaPredicted RBP18.1■□□□□ 0.49
AGAP3-224ENST00000494808 USHBP1Q8N6Y0 703 aa18.09■□□□□ 0.49
AGAP3-224ENST00000494808 STK32BQ9NY57 414 aa18.09■□□□□ 0.49
AGAP3-224ENST00000494808 KNSTRNQ9Y448 316 aa18.09■□□□□ 0.49
AGAP3-224ENST00000494808 DOT1LQ8TEK3 1739 aa18.09■□□□□ 0.49
AGAP3-224ENST00000494808 ANO8Q9HCE9 1232 aaPredicted RBP18.08■□□□□ 0.48
AGAP3-224ENST00000494808 PKD1L3Q7Z443 1732 aa18.08■□□□□ 0.48
AGAP3-224ENST00000494808 PAPPAQ13219 1627 aa18.08■□□□□ 0.48
AGAP3-224ENST00000494808 MAP2P11137 1827 aaKnown RBP18.07■□□□□ 0.48
AGAP3-224ENST00000494808 SLC27A3Q5K4L6 730 aa18.07■□□□□ 0.48
AGAP3-224ENST00000494808 HMGB2P26583 209 aaKnown RBP18.06■□□□□ 0.48
AGAP3-224ENST00000494808 MORC1Q86VD1 984 aa18.06■□□□□ 0.48
AGAP3-224ENST00000494808 SPON1Q9HCB6 807 aa18.06■□□□□ 0.48
AGAP3-224ENST00000494808 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.06■□□□□ 0.48
AGAP3-224ENST00000494808 CASZ1Q86V15 1759 aa18.06■□□□□ 0.48
AGAP3-224ENST00000494808 PRIM1P49642 420 aaKnown RBP18.05■□□□□ 0.48
AGAP3-224ENST00000494808 SLC15A2Q16348 729 aa18.05■□□□□ 0.48
AGAP3-224ENST00000494808 EYA1Q99502 592 aa18.05■□□□□ 0.48
AGAP3-224ENST00000494808 SPG7Q9UQ90 795 aa18.05■□□□□ 0.48
AGAP3-224ENST00000494808 EIF4A2Q14240 407 aaKnown RBP18.04■□□□□ 0.48
AGAP3-224ENST00000494808 TNNT2P45379 298 aaPredicted RBP18.03■□□□□ 0.48
AGAP3-224ENST00000494808 AMER1Q5JTC6 1135 aaPredicted RBP18.03■□□□□ 0.48
AGAP3-224ENST00000494808 SYTL4Q96C24 671 aaPredicted RBP18.03■□□□□ 0.48
AGAP3-224ENST00000494808 IGSF1Q8N6C5 1336 aa18.02■□□□□ 0.48
AGAP3-224ENST00000494808 SRCAPQ6ZRS2 3230 aa18.02■□□□□ 0.47
AGAP3-224ENST00000494808 LY75O60449 1722 aa18.01■□□□□ 0.47
AGAP3-224ENST00000494808 NKX1-1Q15270 411 aaPredicted RBP18.01■□□□□ 0.47
AGAP3-224ENST00000494808 NPC1L1Q9UHC9 1359 aa18.01■□□□□ 0.47
AGAP3-224ENST00000494808 CYP27B1O15528 508 aa18■□□□□ 0.47
AGAP3-224ENST00000494808 PER1O15534 1290 aaPredicted RBP17.98■□□□□ 0.47
AGAP3-224ENST00000494808 LRRC4BQ9NT99 713 aa17.98■□□□□ 0.47
AGAP3-224ENST00000494808 QSER1Q2KHR3 1735 aa17.98■□□□□ 0.47
AGAP3-224ENST00000494808 IFNL2Q8IZJ0 200 aa17.97■□□□□ 0.47
AGAP3-224ENST00000494808 PPP1R1BQ9UD71 204 aaPredicted RBP17.97■□□□□ 0.47
AGAP3-224ENST00000494808 TOGARAM1Q9Y4F4 1720 aa17.96■□□□□ 0.47
AGAP3-224ENST00000494808 ZNF316A6NFI3 1004 aaPredicted RBP17.96■□□□□ 0.47
AGAP3-224ENST00000494808 SMARCC1Q92922 1105 aaPredicted RBP17.96■□□□□ 0.47
AGAP3-224ENST00000494808 AKT1S1Q96B36 256 aa17.96■□□□□ 0.47
AGAP3-224ENST00000494808 MTFR1LQ9H019 292 aa17.96■□□□□ 0.47
AGAP3-224ENST00000494808 PHKG2P15735 406 aa17.95■□□□□ 0.46
AGAP3-224ENST00000494808 ZNF827Q17R98 1081 aa17.95■□□□□ 0.46
AGAP3-224ENST00000494808 AMOTQ4VCS5 1084 aa17.95■□□□□ 0.46
AGAP3-224ENST00000494808 SLC16A10Q8TF71 515 aa17.95■□□□□ 0.46
AGAP3-224ENST00000494808 CCNL1Q9UK58 526 aaPredicted RBP17.95■□□□□ 0.46
AGAP3-224ENST00000494808 PALLDQ8WX93 1383 aa17.94■□□□□ 0.46
AGAP3-224ENST00000494808 HSP90AB1P08238 724 aaKnown RBP17.94■□□□□ 0.46
AGAP3-224ENST00000494808 DDX10Q13206 875 aaKnown RBP17.94■□□□□ 0.46
AGAP3-224ENST00000494808 CNGB1Q14028 1251 aaPredicted RBP17.94■□□□□ 0.46
AGAP3-224ENST00000494808 KDRP35968 1356 aa17.93■□□□□ 0.46
AGAP3-224ENST00000494808 PLEKHO1Q53GL0 409 aaPredicted RBP17.93■□□□□ 0.46
AGAP3-224ENST00000494808 ZBTB7AO95365 584 aa17.92■□□□□ 0.46
AGAP3-224ENST00000494808 IL13P35225 146 aa17.92■□□□□ 0.46
AGAP3-224ENST00000494808 MPRIPQ6WCQ1 1025 aa17.92■□□□□ 0.46
AGAP3-224ENST00000494808 PDGFDQ9GZP0 370 aaPredicted RBP17.92■□□□□ 0.46
AGAP3-224ENST00000494808 PTGER2P43116 358 aa17.91■□□□□ 0.46
AGAP3-224ENST00000494808 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
AGAP3-224ENST00000494808 TMOD3Q9NYL9 352 aa17.91■□□□□ 0.46
AGAP3-224ENST00000494808 MTHFSP49914 203 aa17.9■□□□□ 0.46
AGAP3-224ENST00000494808 TFCP2L1Q9NZI6 479 aa17.9■□□□□ 0.46
AGAP3-224ENST00000494808 ITGB4P16144 1822 aa17.9■□□□□ 0.46
AGAP3-224ENST00000494808 C5P01031 1676 aa17.9■□□□□ 0.46
AGAP3-224ENST00000494808 PIGBQ92521 554 aa17.89■□□□□ 0.45
AGAP3-224ENST00000494808 DCAF5Q96JK2 942 aa17.89■□□□□ 0.45
AGAP3-224ENST00000494808 PNPLA7Q6ZV29 1317 aa17.89■□□□□ 0.45
AGAP3-224ENST00000494808 ERVV-2B6SEH9 535 aa17.88■□□□□ 0.45
AGAP3-224ENST00000494808 SULT6B1Q6IMI4 303 aa17.88■□□□□ 0.45
AGAP3-224ENST00000494808 SGIP1Q9BQI5 828 aa17.88■□□□□ 0.45
AGAP3-224ENST00000494808 ATF5Q9Y2D1 282 aaPredicted RBP17.88■□□□□ 0.45
AGAP3-224ENST00000494808 C1orf141Q5JVX7 400 aa17.87■□□□□ 0.45
AGAP3-224ENST00000494808 FLAD1Q8NFF5 587 aa17.87■□□□□ 0.45
AGAP3-224ENST00000494808 COL24A1Q17RW2 1714 aa17.86■□□□□ 0.45
AGAP3-224ENST00000494808 KAT6BQ8WYB5 2073 aa17.86■□□□□ 0.45
AGAP3-224ENST00000494808 DIAPH1O60610 1272 aaKnown RBP17.86■□□□□ 0.45
AGAP3-224ENST00000494808 KCNQ4P56696 695 aa17.86■□□□□ 0.45
AGAP3-224ENST00000494808 ZNF530Q6P9A1 599 aaPredicted RBP17.86■□□□□ 0.45
AGAP3-224ENST00000494808 AEBP1Q8IUX7 1158 aa17.86■□□□□ 0.45
AGAP3-224ENST00000494808 MAP3K5Q99683 1374 aa17.86■□□□□ 0.45
AGAP3-224ENST00000494808 DCAF8L1A6NGE4 600 aa17.85■□□□□ 0.45
AGAP3-224ENST00000494808 TUBGCP6Q96RT7 1819 aa17.85■□□□□ 0.45
AGAP3-224ENST00000494808 C4BP0C0L5 1744 aa17.84■□□□□ 0.45
AGAP3-224ENST00000494808 ZNF831Q5JPB2 1677 aa17.84■□□□□ 0.45
AGAP3-224ENST00000494808 KDM6AO15550 1401 aaPredicted RBP17.84■□□□□ 0.45
AGAP3-224ENST00000494808 LOC102724428A0A0B4J2F2 783 aa17.84■□□□□ 0.45
AGAP3-224ENST00000494808 POLD1P28340 1107 aa17.84■□□□□ 0.45
AGAP3-224ENST00000494808 SIK1P57059 783 aa17.84■□□□□ 0.45
AGAP3-224ENST00000494808 ARXQ96QS3 562 aa17.84■□□□□ 0.45
AGAP3-224ENST00000494808 COL3A1P02461 1466 aaPredicted RBP17.83■□□□□ 0.45
AGAP3-224ENST00000494808 TAF1LQ8IZX4 1826 aa17.83■□□□□ 0.44
AGAP3-224ENST00000494808 AK7Q96M32 723 aa17.82■□□□□ 0.44
AGAP3-224ENST00000494808 CABP4P57796 275 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms