RNA–Protein interactions for RNA: ENST00000494559.5

PDZRN3-211, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-211ENST00000494559 KRT24Q2M2I5 525 aa19.66■□□□□ 0.74
PDZRN3-211ENST00000494559 LRRC37A3O60309 1634 aa19.66■□□□□ 0.74
PDZRN3-211ENST00000494559 SMC5Q8IY18 1101 aa19.66■□□□□ 0.74
PDZRN3-211ENST00000494559 PHRF1Q9P1Y6 1649 aaKnown RBP19.66■□□□□ 0.74
PDZRN3-211ENST00000494559 HTATSF1O43719 755 aaKnown RBP19.64■□□□□ 0.74
PDZRN3-211ENST00000494559 HAP1P54257 671 aaPredicted RBP19.64■□□□□ 0.74
PDZRN3-211ENST00000494559 RTF1Q92541 710 aaKnown RBP19.64■□□□□ 0.74
PDZRN3-211ENST00000494559 IP6K1Q92551 441 aa19.64■□□□□ 0.74
PDZRN3-211ENST00000494559 ORAI2Q96SN7 254 aa19.64■□□□□ 0.74
PDZRN3-211ENST00000494559 API5Q9BZZ5 524 aaKnown RBP19.64■□□□□ 0.74
PDZRN3-211ENST00000494559 CHMP4BQ9H444 224 aaKnown RBP19.63■□□□□ 0.73
PDZRN3-211ENST00000494559 PROSER2Q86WR7 435 aaPredicted RBP19.63■□□□□ 0.73
PDZRN3-211ENST00000494559 TRPM3Q9HCF6 1732 aaPredicted RBP19.62■□□□□ 0.73
PDZRN3-211ENST00000494559 KCNH5Q8NCM2 988 aa19.62■□□□□ 0.73
PDZRN3-211ENST00000494559 LTV1Q96GA3 475 aaPredicted RBP19.62■□□□□ 0.73
PDZRN3-211ENST00000494559 RGS12O14924 1447 aa19.61■□□□□ 0.73
PDZRN3-211ENST00000494559 MIS18AQ9NYP9 233 aa19.61■□□□□ 0.73
PDZRN3-211ENST00000494559 SLIT3O75094 1523 aa19.6■□□□□ 0.73
PDZRN3-211ENST00000494559 DDRGK1Q96HY6 314 aa19.6■□□□□ 0.73
PDZRN3-211ENST00000494559 MSH6P52701 1360 aa19.6■□□□□ 0.73
PDZRN3-211ENST00000494559 KIF1AQ12756 1690 aa19.6■□□□□ 0.73
PDZRN3-211ENST00000494559 GNAT3A8MTJ3 354 aa19.6■□□□□ 0.73
PDZRN3-211ENST00000494559 TSPYL4Q9UJ04 414 aa19.6■□□□□ 0.73
PDZRN3-211ENST00000494559 C1orf167Q5SNV9 1468 aa19.59■□□□□ 0.73
PDZRN3-211ENST00000494559 MAP3K5Q99683 1374 aa19.58■□□□□ 0.73
PDZRN3-211ENST00000494559 USP19O94966 1318 aa19.58■□□□□ 0.72
PDZRN3-211ENST00000494559 INTS3Q68E01 1043 aaKnown RBP19.58■□□□□ 0.72
PDZRN3-211ENST00000494559 C19orf44Q9H6X5 657 aa19.58■□□□□ 0.72
PDZRN3-211ENST00000494559 RGPD2P0DJD1 1756 aa19.57■□□□□ 0.72
PDZRN3-211ENST00000494559 STRCP1A6NGW2 1772 aa19.57■□□□□ 0.72
PDZRN3-211ENST00000494559 XPCQ01831 940 aaPredicted RBP19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 NBPF6Q5VWK0 638 aa19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 USHBP1Q8N6Y0 703 aa19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 IL17REQ8NFR9 667 aa19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 NBPF4Q96M43 638 aa19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 PTPRCP08575 1304 aa19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 SEC24BO95487 1268 aa19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 GCP02774 474 aa19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 NUCB1Q02818 461 aa19.56■□□□□ 0.72
PDZRN3-211ENST00000494559 ARHGEF25Q86VW2 580 aa19.55■□□□□ 0.72
PDZRN3-211ENST00000494559 C1orf115Q9H7X2 142 aa19.55■□□□□ 0.72
PDZRN3-211ENST00000494559 MST1RQ04912 1400 aa19.55■□□□□ 0.72
PDZRN3-211ENST00000494559 SIRT2Q8IXJ6 389 aa19.55■□□□□ 0.72
PDZRN3-211ENST00000494559 KRT28Q7Z3Y7 464 aa19.53■□□□□ 0.72
PDZRN3-211ENST00000494559 BABAM1Q9NWV8 329 aa19.53■□□□□ 0.72
PDZRN3-211ENST00000494559 NCAPD2Q15021 1401 aa19.53■□□□□ 0.72
PDZRN3-211ENST00000494559 SLC4A2P04920 1241 aa19.53■□□□□ 0.72
PDZRN3-211ENST00000494559 ALS2Q96Q42 1657 aa19.53■□□□□ 0.72
PDZRN3-211ENST00000494559 GCC1Q96CN9 775 aa19.52■□□□□ 0.72
PDZRN3-211ENST00000494559 NCOA3Q9Y6Q9 1424 aa19.51■□□□□ 0.71
PDZRN3-211ENST00000494559 TAF7Q15545 349 aaPredicted RBP19.51■□□□□ 0.71
PDZRN3-211ENST00000494559 CHD1LQ86WJ1 897 aa19.51■□□□□ 0.71
PDZRN3-211ENST00000494559 TMEM94Q12767 1356 aa19.51■□□□□ 0.71
PDZRN3-211ENST00000494559 CEMIPQ8WUJ3 1361 aa19.51■□□□□ 0.71
PDZRN3-211ENST00000494559 DCCP43146 1447 aa19.51■□□□□ 0.71
PDZRN3-211ENST00000494559 FAM208AQ9UK61 1670 aaKnown RBP19.5■□□□□ 0.71
PDZRN3-211ENST00000494559 MED1Q15648 1581 aaPredicted RBP19.5■□□□□ 0.71
PDZRN3-211ENST00000494559 ZBTB7CA1YPR0 619 aa19.5■□□□□ 0.71
PDZRN3-211ENST00000494559 LMO7Q8WWI1 1683 aa19.49■□□□□ 0.71
PDZRN3-211ENST00000494559 CAMTA1Q9Y6Y1 1673 aa19.49■□□□□ 0.71
PDZRN3-211ENST00000494559 G2E3Q7L622 706 aa19.49■□□□□ 0.71
PDZRN3-211ENST00000494559 LRRC59Q96AG4 307 aaKnown RBP19.49■□□□□ 0.71
PDZRN3-211ENST00000494559 CACNA1FO60840 1977 aa19.49■□□□□ 0.71
PDZRN3-211ENST00000494559 SOS1Q07889 1333 aaPredicted RBP19.49■□□□□ 0.71
PDZRN3-211ENST00000494559 LNPKQ9C0E8 428 aa19.48■□□□□ 0.71
PDZRN3-211ENST00000494559 LMOD2Q6P5Q4 547 aa19.48■□□□□ 0.71
PDZRN3-211ENST00000494559 ATP10DQ9P241 1426 aa19.47■□□□□ 0.71
PDZRN3-211ENST00000494559 ATF3P18847 181 aa19.47■□□□□ 0.71
PDZRN3-211ENST00000494559 RGPD5Q99666 1765 aa19.46■□□□□ 0.71
PDZRN3-211ENST00000494559 ANKRD45Q5TZF3 282 aa19.45■□□□□ 0.7
PDZRN3-211ENST00000494559 CCDC30Q5VVM6 783 aa19.45■□□□□ 0.7
PDZRN3-211ENST00000494559 AXIN2Q9Y2T1 843 aa19.45■□□□□ 0.7
PDZRN3-211ENST00000494559 KDM3BQ7LBC6 1761 aa19.45■□□□□ 0.7
PDZRN3-211ENST00000494559 ANKRD24Q8TF21 1146 aa19.45■□□□□ 0.7
PDZRN3-211ENST00000494559 STK31Q9BXU1 1019 aa19.45■□□□□ 0.7
PDZRN3-211ENST00000494559 ANKRD44Q8N8A2 993 aa19.44■□□□□ 0.7
PDZRN3-211ENST00000494559 LGR6Q9HBX8 967 aa19.44■□□□□ 0.7
PDZRN3-211ENST00000494559 TBC1D32Q96NH3 1257 aa19.44■□□□□ 0.7
PDZRN3-211ENST00000494559 DCTPP1Q9H773 170 aa19.44■□□□□ 0.7
PDZRN3-211ENST00000494559 PLEKHG5O94827 1062 aa19.43■□□□□ 0.7
PDZRN3-211ENST00000494559 SLC4A3P48751 1232 aa19.43■□□□□ 0.7
PDZRN3-211ENST00000494559 PLEKHO1Q53GL0 409 aaPredicted RBP19.43■□□□□ 0.7
PDZRN3-211ENST00000494559 AKAP4Q5JQC9 854 aa19.43■□□□□ 0.7
PDZRN3-211ENST00000494559 RPAP2Q8IXW5 612 aaPredicted RBP19.43■□□□□ 0.7
PDZRN3-211ENST00000494559 MEIS3Q99687 375 aa19.43■□□□□ 0.7
PDZRN3-211ENST00000494559 F6X3S4 739 aa19.42■□□□□ 0.7
PDZRN3-211ENST00000494559 AMOTQ4VCS5 1084 aa19.42■□□□□ 0.7
PDZRN3-211ENST00000494559 CEP85Q6P2H3 762 aa19.42■□□□□ 0.7
PDZRN3-211ENST00000494559 CCT4P50991 539 aaKnown RBP19.42■□□□□ 0.7
PDZRN3-211ENST00000494559 HSPA2P54652 639 aa19.42■□□□□ 0.7
PDZRN3-211ENST00000494559 FLIIQ13045 1269 aa19.42■□□□□ 0.7
PDZRN3-211ENST00000494559 ZNF530Q6P9A1 599 aaPredicted RBP19.42■□□□□ 0.7
PDZRN3-211ENST00000494559 UPF2Q9HAU5 1272 aaKnown RBP19.42■□□□□ 0.7
PDZRN3-211ENST00000494559 PXDNQ92626 1479 aa19.41■□□□□ 0.7
PDZRN3-211ENST00000494559 N4BP2Q86UW6 1770 aaPredicted RBP19.41■□□□□ 0.7
PDZRN3-211ENST00000494559 XIRP1Q702N8 1843 aaKnown RBP19.41■□□□□ 0.7
PDZRN3-211ENST00000494559 CADPS2Q86UW7 1296 aa19.4■□□□□ 0.7
PDZRN3-211ENST00000494559 BMP2KLQ5H9B9 411 aa19.4■□□□□ 0.7
PDZRN3-211ENST00000494559 DDX17Q92841 729 aaKnown RBP19.4■□□□□ 0.7
PDZRN3-211ENST00000494559 ERBB3P21860 1342 aa19.39■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms