RNA–Protein interactions for RNA: ENST00000494300.1

NXF3-206, Transcript of nuclear RNA export factor 3, humanhuman

TSL 3

Gene NXF3, Length 543 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3-206ENST00000494300 WASLO00401 505 aaPredicted RBP8.35□□□□□ -1.07
NXF3-206ENST00000494300 CCDC97Q96F63 343 aaPredicted RBP8.35□□□□□ -1.07
NXF3-206ENST00000494300 CWC22Q9HCG8 908 aaKnown RBP8.35□□□□□ -1.07
NXF3-206ENST00000494300 ZSWIM6Q9HCJ5 1215 aa8.35□□□□□ -1.07
NXF3-206ENST00000494300 XIRP1Q702N8 1843 aaKnown RBP8.35□□□□□ -1.07
NXF3-206ENST00000494300 MST1RQ04912 1400 aa8.35□□□□□ -1.07
NXF3-206ENST00000494300 C1orf167Q5SNV9 1468 aa8.34□□□□□ -1.07
NXF3-206ENST00000494300 POTEMA6NI47 508 aa8.34□□□□□ -1.07
NXF3-206ENST00000494300 HSPA1LP34931 641 aa8.34□□□□□ -1.07
NXF3-206ENST00000494300 BRINP3Q76B58 766 aa8.34□□□□□ -1.07
NXF3-206ENST00000494300 MARVELD3Q96A59 401 aa8.34□□□□□ -1.07
NXF3-206ENST00000494300 NPHP3Q7Z494 1330 aa8.33□□□□□ -1.08
NXF3-206ENST00000494300 SLC34A2O95436 690 aa8.33□□□□□ -1.08
NXF3-206ENST00000494300 EMP3P54852 163 aa8.33□□□□□ -1.08
NXF3-206ENST00000494300 POTEGQ6S5H5 508 aa8.33□□□□□ -1.08
NXF3-206ENST00000494300 ANKARQ7Z5J8 1434 aa8.33□□□□□ -1.08
NXF3-206ENST00000494300 CDK19Q9BWU1 502 aa8.33□□□□□ -1.08
NXF3-206ENST00000494300 ROBO1Q9Y6N7 1651 aa8.33□□□□□ -1.08
NXF3-206ENST00000494300 USP47Q96K76 1375 aa8.33□□□□□ -1.08
NXF3-206ENST00000494300 ARHGEF28Q8N1W1 1705 aaKnown RBP8.32□□□□□ -1.08
NXF3-206ENST00000494300 ADGRB2O60241 1585 aa8.32□□□□□ -1.08
NXF3-206ENST00000494300 PPM1GO15355 546 aaPredicted RBP8.32□□□□□ -1.08
NXF3-206ENST00000494300 HOXB1P14653 301 aaPredicted RBP8.32□□□□□ -1.08
NXF3-206ENST00000494300 PSME1Q06323 249 aa8.32□□□□□ -1.08
NXF3-206ENST00000494300 MFSD10Q14728 455 aa8.32□□□□□ -1.08
NXF3-206ENST00000494300 CDCA8Q53HL2 280 aa8.32□□□□□ -1.08
NXF3-206ENST00000494300 ARSIQ5FYB1 569 aa8.32□□□□□ -1.08
NXF3-206ENST00000494300 NGDNQ8NEJ9 315 aaKnown RBP8.32□□□□□ -1.08
NXF3-206ENST00000494300 ORAI2Q96SN7 254 aa8.32□□□□□ -1.08
NXF3-206ENST00000494300 TULP4Q9NRJ4 1543 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 UNCXA6NJT0 531 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 FOXO3O43524 673 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 EIF4G2P78344 907 aaKnown RBP eCLIP8.31□□□□□ -1.08
NXF3-206ENST00000494300 TMF1P82094 1093 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 MCM6Q14566 821 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 E2F4Q16254 413 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 SMYD5Q6GMV2 418 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 GPR153Q6NV75 609 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 LRRC59Q96AG4 307 aaKnown RBP8.31□□□□□ -1.08
NXF3-206ENST00000494300 NUDT16Q96DE0 195 aaKnown RBP8.31□□□□□ -1.08
NXF3-206ENST00000494300 PCDHGA4Q9Y5G9 962 aa8.31□□□□□ -1.08
NXF3-206ENST00000494300 QRICH2Q9H0J4 1663 aa8.3□□□□□ -1.08
NXF3-206ENST00000494300 ST20-MTHFSA0A0A6YYL1 179 aa8.3□□□□□ -1.08
NXF3-206ENST00000494300 CERS3Q8IU89 383 aa8.3□□□□□ -1.08
NXF3-206ENST00000494300 PMFBP1Q8TBY8 1022 aa8.3□□□□□ -1.08
NXF3-206ENST00000494300 UPF1Q92900 1129 aaKnown RBP eCLIP8.3□□□□□ -1.08
NXF3-206ENST00000494300 KHSRPQ92945 711 aaKnown RBP eCLIP8.3□□□□□ -1.08
NXF3-206ENST00000494300 GOPCQ9HD26 462 aa8.3□□□□□ -1.08
NXF3-206ENST00000494300 BCCIPQ9P287 314 aaKnown RBP eCLIP8.3□□□□□ -1.08
NXF3-206ENST00000494300 FMN2Q9NZ56 1722 aa8.29□□□□□ -1.08
NXF3-206ENST00000494300 PATL2C9JE40 543 aaKnown RBP8.29□□□□□ -1.08
NXF3-206ENST00000494300 TBC1D12O60347 775 aa8.29□□□□□ -1.08
NXF3-206ENST00000494300 ZEB1P37275 1124 aaPredicted RBP8.29□□□□□ -1.08
NXF3-206ENST00000494300 XPCQ01831 940 aaPredicted RBP8.29□□□□□ -1.08
NXF3-206ENST00000494300 KRI1Q8N9T8 703 aaKnown RBP8.29□□□□□ -1.08
NXF3-206ENST00000494300 TMC1Q8TDI8 760 aa8.29□□□□□ -1.08
NXF3-206ENST00000494300 DDRGK1Q96HY6 314 aa8.29□□□□□ -1.08
NXF3-206ENST00000494300 ATAD2Q6PL18 1390 aa8.29□□□□□ -1.08
NXF3-206ENST00000494300 JCADQ9P266 1359 aa8.29□□□□□ -1.08
NXF3-206ENST00000494300 SBNO2Q9Y2G9 1366 aa8.29□□□□□ -1.08
NXF3-206ENST00000494300 PHLPP1O60346 1717 aa8.29□□□□□ -1.08
NXF3-206ENST00000494300 KIF1AQ12756 1690 aa8.28□□□□□ -1.08
NXF3-206ENST00000494300 CANXP27824 592 aaKnown RBP8.28□□□□□ -1.08
NXF3-206ENST00000494300 MEX3CQ5U5Q3 659 aaKnown RBP8.28□□□□□ -1.08
NXF3-206ENST00000494300 CC2D2BQ6DHV5 1058 aa8.28□□□□□ -1.08
NXF3-206ENST00000494300 KRT28Q7Z3Y7 464 aa8.28□□□□□ -1.08
NXF3-206ENST00000494300 PTCD2Q8WV60 388 aaKnown RBP8.28□□□□□ -1.08
NXF3-206ENST00000494300 PLSCR2Q9NRY7 297 aa8.28□□□□□ -1.08
NXF3-206ENST00000494300 AHDC1Q5TGY3 1603 aaPredicted RBP8.28□□□□□ -1.08
NXF3-206ENST00000494300 PPIP5K1Q6PFW1 1433 aa8.28□□□□□ -1.08
NXF3-206ENST00000494300 FAM205CA6NFA0 338 aa8.27□□□□□ -1.09
NXF3-206ENST00000494300 NUDT7P0C024 238 aa8.27□□□□□ -1.09
NXF3-206ENST00000494300 HDGFL2Q7Z4V5 671 aaPredicted RBP8.27□□□□□ -1.09
NXF3-206ENST00000494300 DDX17Q92841 729 aaKnown RBP8.27□□□□□ -1.09
NXF3-206ENST00000494300 ERBB3P21860 1342 aa8.27□□□□□ -1.09
NXF3-206ENST00000494300 SPATA31A6Q5VVP1 1343 aa8.27□□□□□ -1.09
NXF3-206ENST00000494300 PRR36Q9H6K5 1346 aa8.27□□□□□ -1.09
NXF3-206ENST00000494300 ATP7BP35670 1465 aa8.26□□□□□ -1.09
NXF3-206ENST00000494300 NUTM2BA6NNL0 878 aaPredicted RBP8.26□□□□□ -1.09
NXF3-206ENST00000494300 NUTM2EB1AL46 878 aaPredicted RBP8.26□□□□□ -1.09
NXF3-206ENST00000494300 KCNA1Q09470 495 aa8.26□□□□□ -1.09
NXF3-206ENST00000494300 NUTM2AQ8IVF1 878 aaPredicted RBP8.26□□□□□ -1.09
NXF3-206ENST00000494300 TERF2IPQ9NYB0 399 aa8.26□□□□□ -1.09
NXF3-206ENST00000494300 CABP1Q9NZU7 370 aa8.26□□□□□ -1.09
NXF3-206ENST00000494300 ACEP12821 1306 aa8.26□□□□□ -1.09
NXF3-206ENST00000494300 SOS2Q07890 1332 aaPredicted RBP8.26□□□□□ -1.09
NXF3-206ENST00000494300 ITSN1Q15811 1721 aa8.26□□□□□ -1.09
NXF3-206ENST00000494300 ARHGEF10O15013 1369 aa8.25□□□□□ -1.09
NXF3-206ENST00000494300 NINLQ9Y2I6 1382 aa8.25□□□□□ -1.09
NXF3-206ENST00000494300 HSPA5P11021 654 aaKnown RBP8.25□□□□□ -1.09
NXF3-206ENST00000494300 OXER1Q8TDS5 423 aa8.25□□□□□ -1.09
NXF3-206ENST00000494300 ZNF592Q92610 1267 aa8.25□□□□□ -1.09
NXF3-206ENST00000494300 BRPF3Q9ULD4 1205 aa8.25□□□□□ -1.09
NXF3-206ENST00000494300 SBNO1A3KN83 1393 aa8.24□□□□□ -1.09
NXF3-206ENST00000494300 TICAM2Q86XR7 235 aa8.24□□□□□ -1.09
NXF3-206ENST00000494300 HS3ST6Q96QI5 342 aa8.24□□□□□ -1.09
NXF3-206ENST00000494300 TESK2Q96S53 571 aa8.24□□□□□ -1.09
NXF3-206ENST00000494300 COL16A1Q07092 1604 aaPredicted RBP8.24□□□□□ -1.09
NXF3-206ENST00000494300 NHSL1Q5SYE7 1610 aa8.24□□□□□ -1.09
NXF3-206ENST00000494300 TNS3Q68CZ2 1445 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms