RNA–Protein interactions for RNA: ENST00000494299.1

SAPCD1-211, Transcript of suppressor APC domain containing 1, humanhuman

TSL 3

Gene SAPCD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-211ENST00000494299 PLEKHG2Q9H7P9 1386 aa18.29■□□□□ 0.52
SAPCD1-211ENST00000494299 KCNQ2O43526 872 aa18.28■□□□□ 0.52
SAPCD1-211ENST00000494299 ZCRB1Q8TBF4 217 aaKnown RBP18.26■□□□□ 0.51
SAPCD1-211ENST00000494299 POLR3GLQ9BT43 218 aa18.26■□□□□ 0.51
SAPCD1-211ENST00000494299 PAPPAQ13219 1627 aa18.26■□□□□ 0.51
SAPCD1-211ENST00000494299 KAT6BQ8WYB5 2073 aa18.26■□□□□ 0.51
SAPCD1-211ENST00000494299 DOT1LQ8TEK3 1739 aa18.25■□□□□ 0.51
SAPCD1-211ENST00000494299 NPC1L1Q9UHC9 1359 aa18.25■□□□□ 0.51
SAPCD1-211ENST00000494299 R3HDM1Q15032 1099 aaKnown RBP18.23■□□□□ 0.51
SAPCD1-211ENST00000494299 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
SAPCD1-211ENST00000494299 EYA1Q99502 592 aa18.23■□□□□ 0.51
SAPCD1-211ENST00000494299 LY75O60449 1722 aa18.23■□□□□ 0.51
SAPCD1-211ENST00000494299 CASZ1Q86V15 1759 aa18.22■□□□□ 0.51
SAPCD1-211ENST00000494299 PSDA5PKW4 1024 aaPredicted RBP18.22■□□□□ 0.51
SAPCD1-211ENST00000494299 EIF4A2Q14240 407 aaKnown RBP18.22■□□□□ 0.51
SAPCD1-211ENST00000494299 KNSTRNQ9Y448 316 aa18.22■□□□□ 0.51
SAPCD1-211ENST00000494299 RAPGEF4Q8WZA2 1011 aa18.21■□□□□ 0.51
SAPCD1-211ENST00000494299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.21■□□□□ 0.51
SAPCD1-211ENST00000494299 IGSF1Q8N6C5 1336 aa18.21■□□□□ 0.51
SAPCD1-211ENST00000494299 TOGARAM1Q9Y4F4 1720 aa18.2■□□□□ 0.5
SAPCD1-211ENST00000494299 TATP17735 454 aaPredicted RBP18.2■□□□□ 0.5
SAPCD1-211ENST00000494299 TXNRD1Q16881 649 aa18.2■□□□□ 0.5
SAPCD1-211ENST00000494299 DDX54Q8TDD1 881 aaKnown RBP18.2■□□□□ 0.5
SAPCD1-211ENST00000494299 ACSBG1Q96GR2 724 aa18.2■□□□□ 0.5
SAPCD1-211ENST00000494299 ANO8Q9HCE9 1232 aaPredicted RBP18.2■□□□□ 0.5
SAPCD1-211ENST00000494299 CYP27B1O15528 508 aa18.19■□□□□ 0.5
SAPCD1-211ENST00000494299 NKX1-1Q15270 411 aaPredicted RBP18.19■□□□□ 0.5
SAPCD1-211ENST00000494299 ITGB4P16144 1822 aa18.19■□□□□ 0.5
SAPCD1-211ENST00000494299 NBPF14Q5TI25 921 aa18.18■□□□□ 0.5
SAPCD1-211ENST00000494299 MORC1Q86VD1 984 aa18.18■□□□□ 0.5
SAPCD1-211ENST00000494299 PCDH11XQ9BZA7 1347 aa18.18■□□□□ 0.5
SAPCD1-211ENST00000494299 PCDH11YQ9BZA8 1340 aa18.18■□□□□ 0.5
SAPCD1-211ENST00000494299 PPM1GO15355 546 aaPredicted RBP18.17■□□□□ 0.5
SAPCD1-211ENST00000494299 TNNT2P45379 298 aaPredicted RBP18.17■□□□□ 0.5
SAPCD1-211ENST00000494299 QSER1Q2KHR3 1735 aa18.17■□□□□ 0.5
SAPCD1-211ENST00000494299 KDRP35968 1356 aa18.17■□□□□ 0.5
SAPCD1-211ENST00000494299 PRIM1P49642 420 aaKnown RBP18.15■□□□□ 0.5
SAPCD1-211ENST00000494299 LRRC4BQ9NT99 713 aa18.15■□□□□ 0.5
SAPCD1-211ENST00000494299 IL13P35225 146 aa18.13■□□□□ 0.49
SAPCD1-211ENST00000494299 SLC27A3Q5K4L6 730 aa18.13■□□□□ 0.49
SAPCD1-211ENST00000494299 SLC15A2Q16348 729 aa18.12■□□□□ 0.49
SAPCD1-211ENST00000494299 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
SAPCD1-211ENST00000494299 SPG7Q9UQ90 795 aa18.11■□□□□ 0.49
SAPCD1-211ENST00000494299 COL3A1P02461 1466 aaPredicted RBP18.11■□□□□ 0.49
SAPCD1-211ENST00000494299 TAF1LQ8IZX4 1826 aa18.1■□□□□ 0.49
SAPCD1-211ENST00000494299 TUBGCP6Q96RT7 1819 aa18.1■□□□□ 0.49
SAPCD1-211ENST00000494299 AKT1S1Q96B36 256 aa18.1■□□□□ 0.49
SAPCD1-211ENST00000494299 PHKG2P15735 406 aa18.09■□□□□ 0.49
SAPCD1-211ENST00000494299 MTHFSP49914 203 aa18.09■□□□□ 0.49
SAPCD1-211ENST00000494299 PDGFDQ9GZP0 370 aaPredicted RBP18.08■□□□□ 0.48
SAPCD1-211ENST00000494299 ZNF827Q17R98 1081 aa18.06■□□□□ 0.48
SAPCD1-211ENST00000494299 AEBP1Q8IUX7 1158 aa18.06■□□□□ 0.48
SAPCD1-211ENST00000494299 IFNL2Q8IZJ0 200 aa18.06■□□□□ 0.48
SAPCD1-211ENST00000494299 STK32BQ9NY57 414 aa18.06■□□□□ 0.48
SAPCD1-211ENST00000494299 ZNF831Q5JPB2 1677 aa18.06■□□□□ 0.48
SAPCD1-211ENST00000494299 CC2D1BQ5T0F9 858 aaKnown RBP18.05■□□□□ 0.48
SAPCD1-211ENST00000494299 PIGBQ92521 554 aa18.05■□□□□ 0.48
SAPCD1-211ENST00000494299 SYTL4Q96C24 671 aaPredicted RBP18.05■□□□□ 0.48
SAPCD1-211ENST00000494299 SGIP1Q9BQI5 828 aa18.05■□□□□ 0.48
SAPCD1-211ENST00000494299 C5P01031 1676 aa18.05■□□□□ 0.48
SAPCD1-211ENST00000494299 ADAMTS7Q9UKP4 1686 aa18.04■□□□□ 0.48
SAPCD1-211ENST00000494299 PTGER2P43116 358 aa18.04■□□□□ 0.48
SAPCD1-211ENST00000494299 AMOTQ4VCS5 1084 aa18.04■□□□□ 0.48
SAPCD1-211ENST00000494299 KDM6AO15550 1401 aaPredicted RBP18.04■□□□□ 0.48
SAPCD1-211ENST00000494299 SPON1Q9HCB6 807 aa18.03■□□□□ 0.48
SAPCD1-211ENST00000494299 SCN11AQ9UI33 1791 aa18.02■□□□□ 0.48
SAPCD1-211ENST00000494299 SULT6B1Q6IMI4 303 aa18.02■□□□□ 0.48
SAPCD1-211ENST00000494299 UTRNP46939 3433 aa18.02■□□□□ 0.47
SAPCD1-211ENST00000494299 PALLDQ8WX93 1383 aa18.02■□□□□ 0.47
SAPCD1-211ENST00000494299 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
SAPCD1-211ENST00000494299 PLEKHO1Q53GL0 409 aaPredicted RBP18.01■□□□□ 0.47
SAPCD1-211ENST00000494299 MPRIPQ6WCQ1 1025 aa18.01■□□□□ 0.47
SAPCD1-211ENST00000494299 PNPLA7Q6ZV29 1317 aa18■□□□□ 0.47
SAPCD1-211ENST00000494299 KCNQ4P56696 695 aa18■□□□□ 0.47
SAPCD1-211ENST00000494299 SMARCC1Q92922 1105 aaPredicted RBP18■□□□□ 0.47
SAPCD1-211ENST00000494299 DCAF5Q96JK2 942 aa18■□□□□ 0.47
SAPCD1-211ENST00000494299 CCNL1Q9UK58 526 aaPredicted RBP18■□□□□ 0.47
SAPCD1-211ENST00000494299 VIRMAQ69YN4 1812 aaKnown RBP18■□□□□ 0.47
SAPCD1-211ENST00000494299 C4BP0C0L5 1744 aa17.99■□□□□ 0.47
SAPCD1-211ENST00000494299 HSP90AB1P08238 724 aaKnown RBP17.99■□□□□ 0.47
SAPCD1-211ENST00000494299 MTFR1LQ9H019 292 aa17.99■□□□□ 0.47
SAPCD1-211ENST00000494299 UBR3Q6ZT12 1888 aa17.99■□□□□ 0.47
SAPCD1-211ENST00000494299 CICQ96RK0 1608 aaPredicted RBP17.98■□□□□ 0.47
SAPCD1-211ENST00000494299 DIAPH1O60610 1272 aaKnown RBP17.98■□□□□ 0.47
SAPCD1-211ENST00000494299 SLC16A10Q8TF71 515 aa17.98■□□□□ 0.47
SAPCD1-211ENST00000494299 MRC1P22897 1456 aa17.97■□□□□ 0.47
SAPCD1-211ENST00000494299 HMGB2P26583 209 aaKnown RBP17.97■□□□□ 0.47
SAPCD1-211ENST00000494299 ZBTB7AO95365 584 aa17.96■□□□□ 0.47
SAPCD1-211ENST00000494299 ZNF530Q6P9A1 599 aaPredicted RBP17.96■□□□□ 0.47
SAPCD1-211ENST00000494299 ATG3Q9NT62 314 aa17.96■□□□□ 0.47
SAPCD1-211ENST00000494299 TMOD3Q9NYL9 352 aa17.96■□□□□ 0.47
SAPCD1-211ENST00000494299 ASAP1Q9ULH1 1129 aa17.96■□□□□ 0.47
SAPCD1-211ENST00000494299 GOLGB1Q14789 3259 aaKnown RBP17.96■□□□□ 0.47
SAPCD1-211ENST00000494299 COL5A3P25940 1745 aaPredicted RBP17.95■□□□□ 0.46
SAPCD1-211ENST00000494299 LOC102724428A0A0B4J2F2 783 aa17.94■□□□□ 0.46
SAPCD1-211ENST00000494299 PPP2R1AP30153 589 aa17.94■□□□□ 0.46
SAPCD1-211ENST00000494299 SIK1P57059 783 aa17.94■□□□□ 0.46
SAPCD1-211ENST00000494299 MAP3K5Q99683 1374 aa17.93■□□□□ 0.46
SAPCD1-211ENST00000494299 AKAP4Q5JQC9 854 aa17.93■□□□□ 0.46
SAPCD1-211ENST00000494299 SLC4A9Q96Q91 983 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms