RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 OVOS2A0A0G2JMS6 1433 aa10.08□□□□□ -0.8
VEGFA-214ENST00000493786 ONECUT3O60422 494 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-214ENST00000493786 PRKAR2BP31323 418 aa10.08□□□□□ -0.8
VEGFA-214ENST00000493786 AMOTQ4VCS5 1084 aa10.08□□□□□ -0.8
VEGFA-214ENST00000493786 ZCRB1Q8TBF4 217 aaKnown RBP10.08□□□□□ -0.8
VEGFA-214ENST00000493786 PCDH11XQ9BZA7 1347 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 PCDH11YQ9BZA8 1340 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 DISP2A7MBM2 1401 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 TNS2Q63HR2 1409 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 MEGF6O75095 1541 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 RGPD1P0DJD0 1748 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 RGPD2P0DJD1 1756 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 CCDC184Q52MB2 194 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 C1orf141Q5JVX7 400 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 FAM9BQ8IZU0 186 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 RSPH6AQ9H0K4 717 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.82e-31■□□□□ 9.6
VEGFA-214ENST00000493786 ADAMTS8Q9UP79 889 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 PARP4Q9UKK3 1724 aaKnown RBP10.07□□□□□ -0.8
VEGFA-214ENST00000493786 RGS12O14924 1447 aa10.07□□□□□ -0.8
VEGFA-214ENST00000493786 ZNF530Q6P9A1 599 aaPredicted RBP10.06□□□□□ -0.8
VEGFA-214ENST00000493786 KRT27Q7Z3Y8 459 aa10.06□□□□□ -0.8
VEGFA-214ENST00000493786 GAS2L2Q8NHY3 880 aa10.06□□□□□ -0.8
VEGFA-214ENST00000493786 DDX54Q8TDD1 881 aaKnown RBP10.06□□□□□ -0.8
VEGFA-214ENST00000493786 PNISRQ8TF01 805 aaKnown RBP10.06□□□□□ -0.8
VEGFA-214ENST00000493786 THSD7AQ9UPZ6 1657 aa10.06□□□□□ -0.8
VEGFA-214ENST00000493786 WNK3Q9BYP7 1800 aa10.05□□□□□ -0.8
VEGFA-214ENST00000493786 RUNDC1Q96C34 613 aa10.05□□□□□ -0.8
VEGFA-214ENST00000493786 HSP90AB1P08238 724 aaKnown RBP10.04□□□□□ -0.8
VEGFA-214ENST00000493786 CCDC146Q8IYE0 955 aa10.04□□□□□ -0.8
VEGFA-214ENST00000493786 IFNL2Q8IZJ0 200 aa10.04□□□□□ -0.8
VEGFA-214ENST00000493786 LRRC37A3O60309 1634 aa10.04□□□□□ -0.8
VEGFA-214ENST00000493786 AKAP4Q5JQC9 854 aa10.03□□□□□ -0.8
VEGFA-214ENST00000493786 PHKG2P15735 406 aa10.02□□□□□ -0.81
VEGFA-214ENST00000493786 LMOD3Q0VAK6 560 aa10.02□□□□□ -0.81
VEGFA-214ENST00000493786 MTHFSDQ2M296 383 aaKnown RBP10.02□□□□□ -0.81
VEGFA-214ENST00000493786 FAM196AQ6ZSG2 479 aa10.02□□□□□ -0.81
VEGFA-214ENST00000493786 RTF1Q92541 710 aaKnown RBP10.02□□□□□ -0.81
VEGFA-214ENST00000493786 PHACTR3Q96KR7 559 aa10.02□□□□□ -0.81
VEGFA-214ENST00000493786 PLEKHF1Q96S99 279 aa10.02□□□□□ -0.81
VEGFA-214ENST00000493786 PKD1L3Q7Z443 1732 aa10.02□□□□□ -0.81
VEGFA-214ENST00000493786 MAP3K5Q99683 1374 aa10.01□□□□□ -0.81
VEGFA-214ENST00000493786 GNAT3A8MTJ3 354 aa10.01□□□□□ -0.81
VEGFA-214ENST00000493786 CYP27B1O15528 508 aa10.01□□□□□ -0.81
VEGFA-214ENST00000493786 NFE2L2Q16236 605 aa10.01□□□□□ -0.81
VEGFA-214ENST00000493786 MARCH10Q8NA82 808 aaPredicted RBP10.01□□□□□ -0.81
VEGFA-214ENST00000493786 NEUROD2Q15784 382 aa10□□□□□ -0.81
VEGFA-214ENST00000493786 FAM182BQ5T319 152 aa10□□□□□ -0.81
VEGFA-214ENST00000493786 DCAF5Q96JK2 942 aa10□□□□□ -0.81
VEGFA-214ENST00000493786 APAF1O14727 1248 aa9.99□□□□□ -0.81
VEGFA-214ENST00000493786 TMPOP42166 694 aaKnown RBP9.99□□□□□ -0.81
VEGFA-214ENST00000493786 RIPK4P57078 832 aa9.99□□□□□ -0.81
VEGFA-214ENST00000493786 NKX1-1Q15270 411 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-214ENST00000493786 SYTL4Q96C24 671 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-214ENST00000493786 HTATSF1O43719 755 aaKnown RBP9.98□□□□□ -0.81
VEGFA-214ENST00000493786 SF3B2Q13435 895 aaKnown RBP9.98□□□□□ -0.81
VEGFA-214ENST00000493786 MPRIPQ6WCQ1 1025 aa9.98□□□□□ -0.81
VEGFA-214ENST00000493786 ACSBG1Q96GR2 724 aa9.98□□□□□ -0.81
VEGFA-214ENST00000493786 RRP7AQ9Y3A4 280 aaKnown RBP9.98□□□□□ -0.81
VEGFA-214ENST00000493786 BRWD3Q6RI45 1802 aa9.98□□□□□ -0.81
VEGFA-214ENST00000493786 BCL9O00512 1426 aa9.98□□□□□ -0.81
VEGFA-214ENST00000493786 ERVV-2B6SEH9 535 aa9.97□□□□□ -0.81
VEGFA-214ENST00000493786 RNMTO43148 476 aaKnown RBP9.97□□□□□ -0.81
VEGFA-214ENST00000493786 CABP4P57796 275 aa9.97□□□□□ -0.81
VEGFA-214ENST00000493786 TEFQ10587 303 aa9.97□□□□□ -0.81
VEGFA-214ENST00000493786 NGEFQ8N5V2 710 aa9.97□□□□□ -0.81
VEGFA-214ENST00000493786 TMOD3Q9NYL9 352 aa9.97□□□□□ -0.81
VEGFA-214ENST00000493786 TRIM37O94972 964 aa9.96□□□□□ -0.82
VEGFA-214ENST00000493786 PRIM1P49642 420 aaKnown RBP9.96□□□□□ -0.82
VEGFA-214ENST00000493786 CALD1Q05682 793 aaKnown RBP9.96□□□□□ -0.82
VEGFA-214ENST00000493786 MCM10Q7L590 875 aa9.96□□□□□ -0.82
VEGFA-214ENST00000493786 SHANK3Q9BYB0 1731 aa9.96□□□□□ -0.82
VEGFA-214ENST00000493786 BCL11BQ9C0K0 894 aaPredicted RBP9.95□□□□□ -0.82
VEGFA-214ENST00000493786 SLC52A2Q9HAB3 445 aa9.95□□□□□ -0.82
VEGFA-214ENST00000493786 LGR6Q9HBX8 967 aa9.95□□□□□ -0.82
VEGFA-214ENST00000493786 SALL2Q9Y467 1007 aaPredicted RBP9.95□□□□□ -0.82
VEGFA-214ENST00000493786 KDM6AO15550 1401 aaPredicted RBP9.95□□□□□ -0.82
VEGFA-214ENST00000493786 DCTN1Q14203 1278 aa9.94□□□□□ -0.82
VEGFA-214ENST00000493786 NCBP3Q53F19 620 aaKnown RBP9.94□□□□□ -0.82
VEGFA-214ENST00000493786 ILDR2Q71H61 639 aa9.94□□□□□ -0.82
VEGFA-214ENST00000493786 CCDC125Q86Z20 511 aa9.94□□□□□ -0.82
VEGFA-214ENST00000493786 CEMIPQ8WUJ3 1361 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 SENP3-EIF4A1A0A087X0R7 540 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 KCNQ2O43526 872 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 APBA3O96018 575 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 HNRNPUQ00839 825 aaKnown RBP eCLIP9.93□□□□□ -0.828e-7■□□□□ 10.9
VEGFA-214ENST00000493786 CCDC27Q2M243 656 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 TTC5Q8N0Z6 440 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 NFATC2IPQ8NCF5 419 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 SMARCC1Q92922 1105 aaPredicted RBP9.93□□□□□ -0.82
VEGFA-214ENST00000493786 EP400Q96L91 3159 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 DOT1LQ8TEK3 1739 aa9.93□□□□□ -0.82
VEGFA-214ENST00000493786 BTBD11A6QL63 1104 aa9.92□□□□□ -0.82
VEGFA-214ENST00000493786 BAG6P46379 1132 aa9.92□□□□□ -0.82
VEGFA-214ENST00000493786 TAF7Q15545 349 aaPredicted RBP9.92□□□□□ -0.82
VEGFA-214ENST00000493786 PIGBQ92521 554 aa9.92□□□□□ -0.82
VEGFA-214ENST00000493786 THUMPD2Q9BTF0 503 aaKnown RBP9.92□□□□□ -0.82
VEGFA-214ENST00000493786 TRIM35Q9UPQ4 493 aa9.92□□□□□ -0.82
VEGFA-214ENST00000493786 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms