RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 RBM42Q9BTD8 480 aaKnown RBP23.63■■□□□ 1.37
RNF40-203ENST00000493683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.63■■□□□ 1.37
RNF40-203ENST00000493683 RAB11FIP3O75154 756 aa23.63■■□□□ 1.37
RNF40-203ENST00000493683 THEMISQ8N1K5 641 aaPredicted RBP23.62■■□□□ 1.37
RNF40-203ENST00000493683 FBXO3Q9UK99 471 aa23.62■■□□□ 1.37
RNF40-203ENST00000493683 EPB41L2O43491 1005 aaKnown RBP23.62■■□□□ 1.37
RNF40-203ENST00000493683 UBAC1Q9BSL1 405 aa23.62■■□□□ 1.37
RNF40-203ENST00000493683 AEBP2Q6ZN18 517 aaPredicted RBP23.62■■□□□ 1.37
RNF40-203ENST00000493683 RTEL1-TNFRSF6BF6WH68 1400 aa23.62■■□□□ 1.37
RNF40-203ENST00000493683 SKIDA1Q1XH10 827 aa23.62■■□□□ 1.37
RNF40-203ENST00000493683 CEP126Q9P2H0 1117 aa23.62■■□□□ 1.37
RNF40-203ENST00000493683 ABCC11Q96J66 1382 aa23.61■■□□□ 1.37
RNF40-203ENST00000493683 CCDC148Q8NFR7 591 aa23.61■■□□□ 1.37
RNF40-203ENST00000493683 EZRP15311 586 aaKnown RBP23.61■■□□□ 1.37
RNF40-203ENST00000493683 UBXN4Q92575 508 aa23.61■■□□□ 1.37
RNF40-203ENST00000493683 ARAP1Q96P48 1450 aa23.61■■□□□ 1.37
RNF40-203ENST00000493683 ZSCAN12O43309 604 aa23.6■■□□□ 1.37
RNF40-203ENST00000493683 NFE2L2Q16236 605 aa23.6■■□□□ 1.37
RNF40-203ENST00000493683 CABP1Q9NZU7 370 aa23.6■■□□□ 1.37
RNF40-203ENST00000493683 NBPF8Q3BBV2 869 aa23.6■■□□□ 1.37
RNF40-203ENST00000493683 IL27Q8NEV9 243 aa23.6■■□□□ 1.37
RNF40-203ENST00000493683 KLHL34Q8N239 644 aa23.6■■□□□ 1.37
RNF40-203ENST00000493683 TAF4BQ92750 862 aa23.6■■□□□ 1.37
RNF40-203ENST00000493683 MPHOSPH8Q99549 860 aa23.6■■□□□ 1.37
RNF40-203ENST00000493683 SCAND2PQ9GZW5 306 aaPredicted RBP23.6■■□□□ 1.37
RNF40-203ENST00000493683 ALDH1L2Q3SY69 923 aa23.59■■□□□ 1.37
RNF40-203ENST00000493683 SH2B1Q9NRF2 756 aaPredicted RBP23.59■■□□□ 1.37
RNF40-203ENST00000493683 ARHGAP29Q52LW3 1261 aa23.59■■□□□ 1.37
RNF40-203ENST00000493683 MCM3P25205 808 aa23.59■■□□□ 1.37
RNF40-203ENST00000493683 AFAP1Q8N556 730 aa23.59■■□□□ 1.37
RNF40-203ENST00000493683 ZNF397Q8NF99 534 aaPredicted RBP23.59■■□□□ 1.37
RNF40-203ENST00000493683 NUP133Q8WUM0 1156 aa23.59■■□□□ 1.37
RNF40-203ENST00000493683 SIL1Q9H173 461 aa23.59■■□□□ 1.37
RNF40-203ENST00000493683 IMMTQ16891 758 aaKnown RBP23.59■■□□□ 1.37
RNF40-203ENST00000493683 JAKMIP3Q5VZ66 844 aa23.58■■□□□ 1.37
RNF40-203ENST00000493683 DESP17661 470 aa23.58■■□□□ 1.37
RNF40-203ENST00000493683 HMGB2P26583 209 aaKnown RBP23.58■■□□□ 1.37
RNF40-203ENST00000493683 KIF1BPQ96EK5 621 aa23.58■■□□□ 1.37
RNF40-203ENST00000493683 GLRX3O76003 335 aaKnown RBP23.57■■□□□ 1.36
RNF40-203ENST00000493683 CWC27Q6UX04 472 aaKnown RBP23.57■■□□□ 1.36
RNF40-203ENST00000493683 INCENPQ9NQS7 918 aa23.57■■□□□ 1.36
RNF40-203ENST00000493683 DAPK1P53355 1430 aa23.57■■□□□ 1.36
RNF40-203ENST00000493683 ANO10Q9NW15 660 aa23.57■■□□□ 1.36
RNF40-203ENST00000493683 TROQ12816 1431 aaPredicted RBP23.57■■□□□ 1.36
RNF40-203ENST00000493683 ENOX2Q16206 610 aaKnown RBP23.56■■□□□ 1.36
RNF40-203ENST00000493683 CCDC183Q5T5S1 534 aa23.56■■□□□ 1.36
RNF40-203ENST00000493683 DCAF8L1A6NGE4 600 aa23.56■■□□□ 1.36
RNF40-203ENST00000493683 HECW1Q76N89 1606 aa23.56■■□□□ 1.36
RNF40-203ENST00000493683 TMCO3Q6UWJ1 677 aa23.56■■□□□ 1.36
RNF40-203ENST00000493683 TDO2P48775 406 aa23.56■■□□□ 1.36
RNF40-203ENST00000493683 FILIP1Q7Z7B0 1213 aa23.56■■□□□ 1.36
RNF40-203ENST00000493683 SFPQP23246 707 aaKnown RBP eCLIP23.55■■□□□ 1.36
RNF40-203ENST00000493683 U3KPZ7 1027 aaPredicted RBP23.55■■□□□ 1.36
RNF40-203ENST00000493683 CTAGE5O15320 804 aa23.55■■□□□ 1.36
RNF40-203ENST00000493683 EIF5P55010 431 aaKnown RBP23.55■■□□□ 1.36
RNF40-203ENST00000493683 KIAA1328Q86T90 577 aa23.55■■□□□ 1.36
RNF40-203ENST00000493683 MAP9Q49MG5 647 aa23.55■■□□□ 1.36
RNF40-203ENST00000493683 ZHX3Q9H4I2 956 aa23.55■■□□□ 1.36
RNF40-203ENST00000493683 NCAPD3P42695 1498 aa23.55■■□□□ 1.36
RNF40-203ENST00000493683 PHAXQ9H814 394 aaKnown RBP23.54■■□□□ 1.36
RNF40-203ENST00000493683 FKBP4Q02790 459 aaKnown RBP eCLIP23.54■■□□□ 1.36
RNF40-203ENST00000493683 FAM177BA6PVY3 158 aa23.54■■□□□ 1.36
RNF40-203ENST00000493683 NEMFO60524 1076 aa23.54■■□□□ 1.36
RNF40-203ENST00000493683 HMGB1P09429 215 aaKnown RBP23.54■■□□□ 1.36
RNF40-203ENST00000493683 CASTP20810 708 aaKnown RBP23.54■■□□□ 1.36
RNF40-203ENST00000493683 CFAP100Q494V2 611 aa23.54■■□□□ 1.36
RNF40-203ENST00000493683 TMPOP42166 694 aaKnown RBP23.53■■□□□ 1.36
RNF40-203ENST00000493683 MAP4K4O95819 1239 aaPredicted RBP23.53■■□□□ 1.36
RNF40-203ENST00000493683 GBP2P32456 591 aaPredicted RBP23.53■■□□□ 1.36
RNF40-203ENST00000493683 PTPN14Q15678 1187 aa23.53■■□□□ 1.36
RNF40-203ENST00000493683 MX1P20591 662 aa23.53■■□□□ 1.36
RNF40-203ENST00000493683 FAM177A1Q8N128 213 aaPredicted RBP23.53■■□□□ 1.36
RNF40-203ENST00000493683 CCDC102AQ96A19 550 aa23.53■■□□□ 1.36
RNF40-203ENST00000493683 PKNOX2Q96KN3 472 aa23.53■■□□□ 1.36
RNF40-203ENST00000493683 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.362e-7■■■■□ 25.2
RNF40-203ENST00000493683 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
RNF40-203ENST00000493683 AKAP2Q9Y2D5 859 aa23.52■■□□□ 1.36
RNF40-203ENST00000493683 HSP90AB3PQ58FF7 597 aa23.52■■□□□ 1.36
RNF40-203ENST00000493683 TMEM57Q8N5G2 664 aa23.52■■□□□ 1.36
RNF40-203ENST00000493683 ZNF287Q9HBT7 754 aa23.52■■□□□ 1.36
RNF40-203ENST00000493683 CRACR2AQ9BSW2 395 aa23.52■■□□□ 1.36
RNF40-203ENST00000493683 BTBD11A6QL63 1104 aa23.52■■□□□ 1.36
RNF40-203ENST00000493683 LRRFIP2Q9Y608 721 aaKnown RBP23.52■■□□□ 1.36
RNF40-203ENST00000493683 PPP1R12BO60237 982 aaPredicted RBP23.51■■□□□ 1.35
RNF40-203ENST00000493683 SYCE3A1L190 88 aa23.51■■□□□ 1.35
RNF40-203ENST00000493683 KIF18AQ8NI77 898 aa23.51■■□□□ 1.35
RNF40-203ENST00000493683 CCDC196A0A1B0GTZ2 297 aa23.51■■□□□ 1.35
RNF40-203ENST00000493683 CETN2P41208 172 aa23.51■■□□□ 1.35
RNF40-203ENST00000493683 PAF1Q8N7H5 531 aa23.51■■□□□ 1.35
RNF40-203ENST00000493683 ANKRD62A6NC57 917 aa23.5■■□□□ 1.35
RNF40-203ENST00000493683 ATP2B2Q01814 1243 aa23.5■■□□□ 1.35
RNF40-203ENST00000493683 TIAM1Q13009 1591 aa23.5■■□□□ 1.35
RNF40-203ENST00000493683 SPA17Q15506 151 aa23.5■■□□□ 1.35
RNF40-203ENST00000493683 GNAT3A8MTJ3 354 aa23.49■■□□□ 1.35
RNF40-203ENST00000493683 POTEJP0CG39 1038 aa23.49■■□□□ 1.35
RNF40-203ENST00000493683 TAX1BP1Q86VP1 789 aa23.49■■□□□ 1.35
RNF40-203ENST00000493683 CENPHQ9H3R5 247 aa23.49■■□□□ 1.35
RNF40-203ENST00000493683 MCM5P33992 734 aa23.49■■□□□ 1.35
RNF40-203ENST00000493683 NKTRP30414 1462 aaKnown RBP23.48■■□□□ 1.35
RNF40-203ENST00000493683 KIF5CO60282 957 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 223.9 ms