RNA–Protein interactions for RNA: ENST00000493673.1

PSMB4-205, Transcript of proteasome subunit beta 4, humanhuman

TSL 5

Gene PSMB4, Length 1,650 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-205ENST00000493673 CFAP53Q96M91 514 aa21.4■■□□□ 1.02
PSMB4-205ENST00000493673 IGSF1Q8N6C5 1336 aa21.4■■□□□ 1.02
PSMB4-205ENST00000493673 PCDH11XQ9BZA7 1347 aa21.4■■□□□ 1.02
PSMB4-205ENST00000493673 PCDH11YQ9BZA8 1340 aa21.4■■□□□ 1.02
PSMB4-205ENST00000493673 MEGF6O75095 1541 aa21.39■■□□□ 1.01
PSMB4-205ENST00000493673 PLSCR1O15162 318 aa21.39■■□□□ 1.01
PSMB4-205ENST00000493673 EZH2Q15910 746 aaKnown RBP21.39■■□□□ 1.01
PSMB4-205ENST00000493673 CAMKK2Q96RR4 588 aa21.39■■□□□ 1.01
PSMB4-205ENST00000493673 KCNQ2O43526 872 aa21.37■■□□□ 1.01
PSMB4-205ENST00000493673 PLEKHO1Q53GL0 409 aaPredicted RBP21.37■■□□□ 1.01
PSMB4-205ENST00000493673 SULT6B1Q6IMI4 303 aa21.37■■□□□ 1.01
PSMB4-205ENST00000493673 WNK3Q9BYP7 1800 aa21.37■■□□□ 1.01
PSMB4-205ENST00000493673 SYTL4Q96C24 671 aaPredicted RBP21.37■■□□□ 1.01
PSMB4-205ENST00000493673 PARD3Q8TEW0 1356 aa21.37■■□□□ 1.01
PSMB4-205ENST00000493673 PPP2R1AP30153 589 aa21.36■■□□□ 1.01
PSMB4-205ENST00000493673 AMOTQ4VCS5 1084 aa21.36■■□□□ 1.01
PSMB4-205ENST00000493673 RGPD1P0DJD0 1748 aa21.36■■□□□ 1.01
PSMB4-205ENST00000493673 PRIM1P49642 420 aaKnown RBP21.35■■□□□ 1.01
PSMB4-205ENST00000493673 NCAPD2Q15021 1401 aa21.35■■□□□ 1.01
PSMB4-205ENST00000493673 PTF1AQ7RTS3 328 aa21.35■■□□□ 1.01
PSMB4-205ENST00000493673 RGPD2P0DJD1 1756 aa21.35■■□□□ 1.01
PSMB4-205ENST00000493673 IFNL2Q8IZJ0 200 aa21.34■■□□□ 1.01
PSMB4-205ENST00000493673 NUDCQ9Y266 331 aa21.34■■□□□ 1.01
PSMB4-205ENST00000493673 CYP27B1O15528 508 aa21.34■■□□□ 1.01
PSMB4-205ENST00000493673 NBPF14Q5TI25 921 aa21.34■■□□□ 1.01
PSMB4-205ENST00000493673 U2SURPO15042 1029 aaKnown RBP21.33■■□□□ 1
PSMB4-205ENST00000493673 PLEKHG2Q9H7P9 1386 aa21.32■■□□□ 1
PSMB4-205ENST00000493673 RALBP1Q15311 655 aa21.32■■□□□ 1
PSMB4-205ENST00000493673 ZNF316A6NFI3 1004 aaPredicted RBP21.31■■□□□ 1
PSMB4-205ENST00000493673 AEBP1Q8IUX7 1158 aa21.31■■□□□ 1
PSMB4-205ENST00000493673 HSP90AB1P08238 724 aaKnown RBP21.3■■□□□ 1
PSMB4-205ENST00000493673 NKX1-1Q15270 411 aaPredicted RBP21.3■■□□□ 1
PSMB4-205ENST00000493673 HMOX1P09601 288 aa21.29■■□□□ 1
PSMB4-205ENST00000493673 PHKG2P15735 406 aa21.29■■□□□ 1
PSMB4-205ENST00000493673 C1orf141Q5JVX7 400 aa21.28■■□□□ 1
PSMB4-205ENST00000493673 ZNF530Q6P9A1 599 aaPredicted RBP21.28■■□□□ 1
PSMB4-205ENST00000493673 TXNRD1Q16881 649 aa21.27■■□□□ 1
PSMB4-205ENST00000493673 KDRP35968 1356 aa21.27■■□□□ 1
PSMB4-205ENST00000493673 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
PSMB4-205ENST00000493673 TNS1Q9HBL0 1735 aaKnown RBP21.25■□□□□ 0.99
PSMB4-205ENST00000493673 PROM2Q8N271 834 aa21.24■□□□□ 0.99
PSMB4-205ENST00000493673 DCAF5Q96JK2 942 aa21.24■□□□□ 0.99
PSMB4-205ENST00000493673 KAT6BQ8WYB5 2073 aa21.24■□□□□ 0.99
PSMB4-205ENST00000493673 U2AF1L5P0DN76 240 aaPredicted RBP21.24■□□□□ 0.99
PSMB4-205ENST00000493673 U2AF1Q01081 240 aaKnown RBP eCLIP21.24■□□□□ 0.997e-7■■■■□ 21.2
PSMB4-205ENST00000493673 HMGB2P26583 209 aaKnown RBP21.23■□□□□ 0.99
PSMB4-205ENST00000493673 SBF2Q86WG5 1849 aa21.23■□□□□ 0.99
PSMB4-205ENST00000493673 R3HDM1Q15032 1099 aaKnown RBP21.22■□□□□ 0.99
PSMB4-205ENST00000493673 SLC27A3Q5K4L6 730 aa21.22■□□□□ 0.99
PSMB4-205ENST00000493673 TMOD3Q9NYL9 352 aa21.22■□□□□ 0.99
PSMB4-205ENST00000493673 ERVV-2B6SEH9 535 aa21.21■□□□□ 0.99
PSMB4-205ENST00000493673 SMARCC1Q92922 1105 aaPredicted RBP21.21■□□□□ 0.99
PSMB4-205ENST00000493673 PSDA5PKW4 1024 aaPredicted RBP21.21■□□□□ 0.99
PSMB4-205ENST00000493673 AKAP4Q5JQC9 854 aa21.21■□□□□ 0.99
PSMB4-205ENST00000493673 PIGBQ92521 554 aa21.2■□□□□ 0.98
PSMB4-205ENST00000493673 FCHSD2O94868 740 aa21.19■□□□□ 0.98
PSMB4-205ENST00000493673 STK32BQ9NY57 414 aa21.19■□□□□ 0.98
PSMB4-205ENST00000493673 NHSQ6T4R5 1651 aa21.19■□□□□ 0.98
PSMB4-205ENST00000493673 CABP4P57796 275 aa21.18■□□□□ 0.98
PSMB4-205ENST00000493673 COL3A1P02461 1466 aaPredicted RBP21.18■□□□□ 0.98
PSMB4-205ENST00000493673 NEFMP07197 916 aa21.18■□□□□ 0.98
PSMB4-205ENST00000493673 MTHFSDQ2M296 383 aaKnown RBP21.18■□□□□ 0.98
PSMB4-205ENST00000493673 GAS2L2Q8NHY3 880 aa21.18■□□□□ 0.98
PSMB4-205ENST00000493673 MYBBP1AQ9BQG0 1328 aaKnown RBP21.18■□□□□ 0.98
PSMB4-205ENST00000493673 PNNQ9H307 717 aaKnown RBP21.17■□□□□ 0.98
PSMB4-205ENST00000493673 PKD1L3Q7Z443 1732 aa21.17■□□□□ 0.98
PSMB4-205ENST00000493673 PRKAR2BP31323 418 aa21.16■□□□□ 0.98
PSMB4-205ENST00000493673 CCNL1Q9UK58 526 aaPredicted RBP21.16■□□□□ 0.98
PSMB4-205ENST00000493673 PRKRIP1Q9H875 184 aaPredicted RBP21.15■□□□□ 0.98
PSMB4-205ENST00000493673 SHANK3Q9BYB0 1731 aa21.15■□□□□ 0.98
PSMB4-205ENST00000493673 RSPH6AQ9H0K4 717 aa21.15■□□□□ 0.98
PSMB4-205ENST00000493673 SLC15A2Q16348 729 aa21.14■□□□□ 0.97
PSMB4-205ENST00000493673 LRRC4BQ9NT99 713 aa21.14■□□□□ 0.97
PSMB4-205ENST00000493673 NFATC2IPQ8NCF5 419 aa21.12■□□□□ 0.97
PSMB4-205ENST00000493673 PALLDQ8WX93 1383 aa21.12■□□□□ 0.97
PSMB4-205ENST00000493673 GNAT3A8MTJ3 354 aa21.12■□□□□ 0.97
PSMB4-205ENST00000493673 ASAP1Q9ULH1 1129 aa21.12■□□□□ 0.97
PSMB4-205ENST00000493673 BTAF1O14981 1849 aa21.11■□□□□ 0.97
PSMB4-205ENST00000493673 RGPD3A6NKT7 1758 aaPredicted RBP21.11■□□□□ 0.97
PSMB4-205ENST00000493673 RGPD4Q7Z3J3 1758 aa21.11■□□□□ 0.97
PSMB4-205ENST00000493673 RNMTO43148 476 aaKnown RBP21.11■□□□□ 0.97
PSMB4-205ENST00000493673 PHACTR3Q96KR7 559 aa21.11■□□□□ 0.97
PSMB4-205ENST00000493673 ANO8Q9HCE9 1232 aaPredicted RBP21.11■□□□□ 0.97
PSMB4-205ENST00000493673 DOT1LQ8TEK3 1739 aa21.1■□□□□ 0.97
PSMB4-205ENST00000493673 KCNQ4P56696 695 aa21.1■□□□□ 0.97
PSMB4-205ENST00000493673 LGR6Q9HBX8 967 aa21.1■□□□□ 0.97
PSMB4-205ENST00000493673 ATG3Q9NT62 314 aa21.1■□□□□ 0.97
PSMB4-205ENST00000493673 RREB1Q92766 1687 aa21.08■□□□□ 0.96
PSMB4-205ENST00000493673 LOC102724428A0A0B4J2F2 783 aa21.08■□□□□ 0.96
PSMB4-205ENST00000493673 SIK1P57059 783 aa21.08■□□□□ 0.96
PSMB4-205ENST00000493673 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.96
PSMB4-205ENST00000493673 SLC52A2Q9HAB3 445 aa21.08■□□□□ 0.96
PSMB4-205ENST00000493673 TFCP2L1Q9NZI6 479 aa21.08■□□□□ 0.96
PSMB4-205ENST00000493673 ANP32CO43423 234 aa21.07■□□□□ 0.96
PSMB4-205ENST00000493673 RBM42Q9BTD8 480 aaKnown RBP21.07■□□□□ 0.96
PSMB4-205ENST00000493673 KDM6AO15550 1401 aaPredicted RBP21.07■□□□□ 0.96
PSMB4-205ENST00000493673 TEFQ10587 303 aa21.06■□□□□ 0.96
PSMB4-205ENST00000493673 WDR43Q15061 677 aaKnown RBP eCLIP21.06■□□□□ 0.96
PSMB4-205ENST00000493673 MAP3K5Q99683 1374 aa21.06■□□□□ 0.96
PSMB4-205ENST00000493673 ATP6V1AP38606 617 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms