RNA–Protein interactions for RNA: ENST00000493615.5

NECTIN3-211, Transcript of nectin cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NECTIN3, Length 1,876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-211ENST00000493615 STRN4Q9NRL3 753 aa24.62■■□□□ 1.53
NECTIN3-211ENST00000493615 USP21Q9UK80 565 aa24.62■■□□□ 1.53
NECTIN3-211ENST00000493615 SLIT2O94813 1529 aa24.61■■□□□ 1.53
NECTIN3-211ENST00000493615 LMOD3Q0VAK6 560 aa24.61■■□□□ 1.53
NECTIN3-211ENST00000493615 IL16Q14005 1332 aa24.6■■□□□ 1.53
NECTIN3-211ENST00000493615 EVA1CP58658 441 aa24.6■■□□□ 1.53
NECTIN3-211ENST00000493615 MCM10Q7L590 875 aa24.6■■□□□ 1.53
NECTIN3-211ENST00000493615 TSR2Q969E8 191 aaKnown RBP24.59■■□□□ 1.53
NECTIN3-211ENST00000493615 BCL9LQ86UU0 1499 aa24.59■■□□□ 1.53
NECTIN3-211ENST00000493615 LARP1Q6PKG0 1096 aaKnown RBP24.58■■□□□ 1.53
NECTIN3-211ENST00000493615 UNC5CLQ8IV45 518 aa24.58■■□□□ 1.53
NECTIN3-211ENST00000493615 RCAN3Q9UKA8 241 aa24.58■■□□□ 1.53
NECTIN3-211ENST00000493615 FAM208AQ9UK61 1670 aaKnown RBP24.58■■□□□ 1.53
NECTIN3-211ENST00000493615 NWD2Q9ULI1 1742 aa24.58■■□□□ 1.53
NECTIN3-211ENST00000493615 TOM1L2Q6ZVM7 507 aa24.58■■□□□ 1.52
NECTIN3-211ENST00000493615 MYH16Q9H6N6 1097 aa24.58■■□□□ 1.52
NECTIN3-211ENST00000493615 FANCIQ9NVI1 1328 aa24.56■■□□□ 1.52
NECTIN3-211ENST00000493615 PLEKHO1Q53GL0 409 aaPredicted RBP24.55■■□□□ 1.52
NECTIN3-211ENST00000493615 RAPGEF4Q8WZA2 1011 aa24.55■■□□□ 1.52
NECTIN3-211ENST00000493615 RGS17Q9UGC6 210 aaPredicted RBP24.55■■□□□ 1.52
NECTIN3-211ENST00000493615 NRAPQ86VF7 1730 aa24.55■■□□□ 1.52
NECTIN3-211ENST00000493615 GNAT3A8MTJ3 354 aa24.55■■□□□ 1.52
NECTIN3-211ENST00000493615 LAS1LQ9Y4W2 734 aaKnown RBP24.55■■□□□ 1.52
NECTIN3-211ENST00000493615 MEGF6O75095 1541 aa24.54■■□□□ 1.52
NECTIN3-211ENST00000493615 MAP3K5Q99683 1374 aa24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 ZNF853P0CG23 659 aa24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 CALD1Q05682 793 aaKnown RBP24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 AMOTQ4VCS5 1084 aa24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 RTF1Q92541 710 aaKnown RBP24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 CCDC9Q9Y3X0 531 aaKnown RBP24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 ZNF530Q6P9A1 599 aaPredicted RBP24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 CARD10Q9BWT7 1032 aa24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 QTRT2Q9H974 415 aaKnown RBP24.53■■□□□ 1.52
NECTIN3-211ENST00000493615 HTATSF1O43719 755 aaKnown RBP24.52■■□□□ 1.52
NECTIN3-211ENST00000493615 TATP17735 454 aaPredicted RBP24.52■■□□□ 1.52
NECTIN3-211ENST00000493615 ZNF772Q68DY9 489 aaPredicted RBP24.52■■□□□ 1.52
NECTIN3-211ENST00000493615 IL17REQ8NFR9 667 aa24.52■■□□□ 1.52
NECTIN3-211ENST00000493615 IFT57Q9NWB7 429 aa24.52■■□□□ 1.52
NECTIN3-211ENST00000493615 USP35Q9P2H5 1018 aa24.51■■□□□ 1.51
NECTIN3-211ENST00000493615 RNF123Q5XPI4 1314 aa24.51■■□□□ 1.51
NECTIN3-211ENST00000493615 CRB1P82279 1406 aa24.51■■□□□ 1.51
NECTIN3-211ENST00000493615 CFAP44Q96MT7 982 aa24.51■■□□□ 1.51
NECTIN3-211ENST00000493615 GNAI1P63096 354 aa24.5■■□□□ 1.51
NECTIN3-211ENST00000493615 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.5■■□□□ 1.51
NECTIN3-211ENST00000493615 MBIPQ9NS73 344 aa24.49■■□□□ 1.51
NECTIN3-211ENST00000493615 TRPC5Q9UL62 973 aaPredicted RBP24.49■■□□□ 1.51
NECTIN3-211ENST00000493615 EXOSC9Q06265 439 aaKnown RBP24.49■■□□□ 1.51
NECTIN3-211ENST00000493615 AKAP4Q5JQC9 854 aa24.49■■□□□ 1.51
NECTIN3-211ENST00000493615 VPS72Q15906 364 aa24.48■■□□□ 1.51
NECTIN3-211ENST00000493615 IRX6P78412 446 aaPredicted RBP24.47■■□□□ 1.51
NECTIN3-211ENST00000493615 LGR6Q9HBX8 967 aa24.47■■□□□ 1.51
NECTIN3-211ENST00000493615 POTEAQ6S8J7 498 aa24.47■■□□□ 1.51
NECTIN3-211ENST00000493615 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.47■■□□□ 1.513e-7■■□□□ 11.7
NECTIN3-211ENST00000493615 CHL1O00533 1208 aa24.46■■□□□ 1.51
NECTIN3-211ENST00000493615 ATRNO75882 1429 aa24.46■■□□□ 1.51
NECTIN3-211ENST00000493615 FKBP8Q14318 412 aa24.45■■□□□ 1.51
NECTIN3-211ENST00000493615 C1orf141Q5JVX7 400 aa24.45■■□□□ 1.51
NECTIN3-211ENST00000493615 MPRIPQ6WCQ1 1025 aa24.45■■□□□ 1.51
NECTIN3-211ENST00000493615 MIS18AQ9NYP9 233 aa24.45■■□□□ 1.51
NECTIN3-211ENST00000493615 SPG7Q9UQ90 795 aa24.45■■□□□ 1.51
NECTIN3-211ENST00000493615 SPATA31A5Q5VU36 1347 aa24.45■■□□□ 1.5
NECTIN3-211ENST00000493615 SPATA31A7Q8IWB4 1347 aa24.45■■□□□ 1.5
NECTIN3-211ENST00000493615 OVOS2A0A0G2JMS6 1433 aa24.44■■□□□ 1.5
NECTIN3-211ENST00000493615 CEMIPQ8WUJ3 1361 aa24.44■■□□□ 1.5
NECTIN3-211ENST00000493615 GJD4Q96KN9 370 aaPredicted RBP24.44■■□□□ 1.5
NECTIN3-211ENST00000493615 SPATA31A1Q5TZJ5 1347 aa24.43■■□□□ 1.5
NECTIN3-211ENST00000493615 NEFLP07196 543 aa24.43■■□□□ 1.5
NECTIN3-211ENST00000493615 IL2RBP14784 551 aa24.43■■□□□ 1.5
NECTIN3-211ENST00000493615 RRP1P56182 461 aaKnown RBP24.43■■□□□ 1.5
NECTIN3-211ENST00000493615 PLEKHG2Q9H7P9 1386 aa24.42■■□□□ 1.5
NECTIN3-211ENST00000493615 CYP27B1O15528 508 aa24.42■■□□□ 1.5
NECTIN3-211ENST00000493615 BCAR3O75815 825 aa24.42■■□□□ 1.5
NECTIN3-211ENST00000493615 PHKG2P15735 406 aa24.41■■□□□ 1.5
NECTIN3-211ENST00000493615 LRRC37A3O60309 1634 aa24.41■■□□□ 1.5
NECTIN3-211ENST00000493615 RNMTO43148 476 aaKnown RBP24.41■■□□□ 1.5
NECTIN3-211ENST00000493615 PLIN1O60240 522 aa24.41■■□□□ 1.5
NECTIN3-211ENST00000493615 RARSP54136 660 aaKnown RBP24.4■■□□□ 1.5
NECTIN3-211ENST00000493615 TSPYL6Q8N831 410 aa24.4■■□□□ 1.5
NECTIN3-211ENST00000493615 GLI3P10071 1580 aa24.39■■□□□ 1.5
NECTIN3-211ENST00000493615 FAM98CQ17RN3 349 aaKnown RBP24.39■■□□□ 1.5
NECTIN3-211ENST00000493615 ZCRB1Q8TBF4 217 aaKnown RBP24.39■■□□□ 1.5
NECTIN3-211ENST00000493615 RXRBP28702 533 aa24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 RBM6P78332 1123 aaKnown RBP24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 TAF7Q15545 349 aaPredicted RBP24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 IFNL2Q8IZJ0 200 aa24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 C8orf58Q8NAV2 365 aa24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 PKD1L3Q7Z443 1732 aa24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 CT47B1P0C2W7 299 aaPredicted RBP24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 KRT24Q2M2I5 525 aa24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 TSPYL4Q9UJ04 414 aa24.38■■□□□ 1.49
NECTIN3-211ENST00000493615 ELL2O00472 640 aaPredicted RBP24.37■■□□□ 1.49
NECTIN3-211ENST00000493615 BCL2L13Q9BXK5 485 aa24.36■■□□□ 1.49
NECTIN3-211ENST00000493615 PARP4Q9UKK3 1724 aaKnown RBP24.36■■□□□ 1.49
NECTIN3-211ENST00000493615 DISP2A7MBM2 1401 aa24.36■■□□□ 1.49
NECTIN3-211ENST00000493615 KDM6AO15550 1401 aaPredicted RBP24.36■■□□□ 1.49
NECTIN3-211ENST00000493615 VAMP4O75379 141 aa24.35■■□□□ 1.49
NECTIN3-211ENST00000493615 A0A0G2JS52 829 aa24.34■■□□□ 1.49
NECTIN3-211ENST00000493615 MYT1Q01538 1121 aa24.34■■□□□ 1.49
NECTIN3-211ENST00000493615 THRAP3Q9Y2W1 955 aaKnown RBP24.34■■□□□ 1.49
NECTIN3-211ENST00000493615 TEFQ10587 303 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms