RNA–Protein interactions for RNA: ENST00000493056.5

LTF-208, Transcript of lactotransferrin, human

TSL 3

Gene LTF, Length 493 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTF-208	ENST00000493056	SHANK3	Q9BYB0	1731 aa		10.86	□□□□□ -0.67
LTF-208	ENST00000493056	NUP188	Q5SRE5	1749 aa		10.85	□□□□□ -0.67
LTF-208	ENST00000493056	PER1	O15534	1290 aa	Predicted RBP	10.85	□□□□□ -0.67
LTF-208	ENST00000493056	DDX54	Q8TDD1	881 aa	Known RBP	10.85	□□□□□ -0.67
LTF-208	ENST00000493056	SPG7	Q9UQ90	795 aa		10.85	□□□□□ -0.67
LTF-208	ENST00000493056	EMILIN1	Q9Y6C2	1016 aa		10.85	□□□□□ -0.67
LTF-208	ENST00000493056	NPC1L1	Q9UHC9	1359 aa		10.85	□□□□□ -0.67
LTF-208	ENST00000493056	PKD1L3	Q7Z443	1732 aa		10.84	□□□□□ -0.67
LTF-208	ENST00000493056	TNNT2	P45379	298 aa	Predicted RBP	10.84	□□□□□ -0.67
LTF-208	ENST00000493056	EZH2	Q15910	746 aa	Known RBP	10.84	□□□□□ -0.67
LTF-208	ENST00000493056	VIRMA	Q69YN4	1812 aa	Known RBP	10.84	□□□□□ -0.67
LTF-208	ENST00000493056	PCDH11X	Q9BZA7	1347 aa		10.84	□□□□□ -0.67
LTF-208	ENST00000493056	PCDH11Y	Q9BZA8	1340 aa		10.84	□□□□□ -0.67
LTF-208	ENST00000493056	ZEB1	P37275	1124 aa	Predicted RBP	10.83	□□□□□ -0.68
LTF-208	ENST00000493056	AMER1	Q5JTC6	1135 aa	Predicted RBP	10.83	□□□□□ -0.68
LTF-208	ENST00000493056	DOT1L	Q8TEK3	1739 aa		10.82	□□□□□ -0.68
LTF-208	ENST00000493056	LY75	O60449	1722 aa		10.81	□□□□□ -0.68
LTF-208	ENST00000493056	EYA1	Q99502	592 aa		10.81	□□□□□ -0.68
LTF-208	ENST00000493056	NCAPD2	Q15021	1401 aa		10.81	□□□□□ -0.68
LTF-208	ENST00000493056	HSP90AB1	P08238	724 aa	Known RBP	10.8	□□□□□ -0.68
LTF-208	ENST00000493056	EIF4A2	Q14240	407 aa	Known RBP	10.8	□□□□□ -0.68
LTF-208	ENST00000493056	AMOT	Q4VCS5	1084 aa		10.8	□□□□□ -0.68
LTF-208	ENST00000493056	SLC27A3	Q5K4L6	730 aa		10.8	□□□□□ -0.68
LTF-208	ENST00000493056	MEGF6	O75095	1541 aa		10.79	□□□□□ -0.68
LTF-208	ENST00000493056	QSER1	Q2KHR3	1735 aa		10.79	□□□□□ -0.68
LTF-208	ENST00000493056	TXNRD1	Q16881	649 aa		10.79	□□□□□ -0.68
LTF-208	ENST00000493056	PLEKHO1	Q53GL0	409 aa	Predicted RBP	10.79	□□□□□ -0.68
LTF-208	ENST00000493056	IFNL2	Q8IZJ0	200 aa		10.79	□□□□□ -0.68
LTF-208	ENST00000493056	USHBP1	Q8N6Y0	703 aa		10.79	□□□□□ -0.68
LTF-208	ENST00000493056	ACSBG1	Q96GR2	724 aa		10.79	□□□□□ -0.68
LTF-208	ENST00000493056	LRP5	O75197	1615 aa		10.79	□□□□□ -0.68
LTF-208	ENST00000493056	KCNQ2	O43526	872 aa		10.78	□□□□□ -0.68
LTF-208	ENST00000493056	PRIM1	P49642	420 aa	Known RBP	10.78	□□□□□ -0.68
LTF-208	ENST00000493056	MTHFS	P49914	203 aa		10.78	□□□□□ -0.68
LTF-208	ENST00000493056	NKX1-1	Q15270	411 aa	Predicted RBP	10.78	□□□□□ -0.68
LTF-208	ENST00000493056	CC2D1B	Q5T0F9	858 aa	Known RBP	10.78	□□□□□ -0.68
LTF-208	ENST00000493056	SYTL4	Q96C24	671 aa	Predicted RBP	10.78	□□□□□ -0.68
LTF-208	ENST00000493056	CFAP53	Q96M91	514 aa		10.78	□□□□□ -0.68
LTF-208	ENST00000493056	TAF1L	Q8IZX4	1826 aa		10.78	□□□□□ -0.68
LTF-208	ENST00000493056	IGSF1	Q8N6C5	1336 aa		10.78	□□□□□ -0.68
LTF-208	ENST00000493056	DIAPH1	O60610	1272 aa	Known RBP	10.77	□□□□□ -0.69
LTF-208	ENST00000493056	R3HDM1	Q15032	1099 aa	Known RBP	10.77	□□□□□ -0.69
LTF-208	ENST00000493056	SMARCC1	Q92922	1105 aa	Predicted RBP	10.77	□□□□□ -0.69
LTF-208	ENST00000493056	STK32B	Q9NY57	414 aa		10.77	□□□□□ -0.69
LTF-208	ENST00000493056	SCN11A	Q9UI33	1791 aa		10.77	□□□□□ -0.69
LTF-208	ENST00000493056	PSD	A5PKW4	1024 aa	Predicted RBP	10.75	□□□□□ -0.69
LTF-208	ENST00000493056	ERVV-2	B6SEH9	535 aa		10.75	□□□□□ -0.69
LTF-208	ENST00000493056	IL13	P35225	146 aa		10.75	□□□□□ -0.69
LTF-208	ENST00000493056	C1orf141	Q5JVX7	400 aa		10.75	□□□□□ -0.69
LTF-208	ENST00000493056	PROM2	Q8N271	834 aa		10.75	□□□□□ -0.69
LTF-208	ENST00000493056	NUDC	Q9Y266	331 aa		10.75	□□□□□ -0.69
LTF-208	ENST00000493056	CYP27B1	O15528	508 aa		10.74	□□□□□ -0.69
LTF-208	ENST00000493056	SLC15A2	Q16348	729 aa		10.74	□□□□□ -0.69
LTF-208	ENST00000493056	SULT6B1	Q6IMI4	303 aa		10.74	□□□□□ -0.69
LTF-208	ENST00000493056	MPRIP	Q6WCQ1	1025 aa		10.74	□□□□□ -0.69
LTF-208	ENST00000493056	DCAF5	Q96JK2	942 aa		10.74	□□□□□ -0.69
LTF-208	ENST00000493056	KDR	P35968	1356 aa		10.74	□□□□□ -0.69
LTF-208	ENST00000493056	C5	P01031	1676 aa		10.73	□□□□□ -0.69
LTF-208	ENST00000493056	ZNF831	Q5JPB2	1677 aa		10.73	□□□□□ -0.69
LTF-208	ENST00000493056	PHKG2	P15735	406 aa		10.73	□□□□□ -0.69
LTF-208	ENST00000493056	PTF1A	Q7RTS3	328 aa		10.73	□□□□□ -0.69
LTF-208	ENST00000493056	SPON1	Q9HCB6	807 aa		10.73	□□□□□ -0.69
LTF-208	ENST00000493056	TMOD3	Q9NYL9	352 aa		10.73	□□□□□ -0.69
LTF-208	ENST00000493056	SLC16A10	Q8TF71	515 aa		10.72	□□□□□ -0.69
LTF-208	ENST00000493056	TOGARAM1	Q9Y4F4	1720 aa		10.72	□□□□□ -0.69
LTF-208	ENST00000493056	CASZ1	Q86V15	1759 aa		10.72	□□□□□ -0.69
LTF-208	ENST00000493056	AKAP4	Q5JQC9	854 aa		10.71	□□□□□ -0.69
LTF-208	ENST00000493056	FLAD1	Q8NFF5	587 aa		10.71	□□□□□ -0.69
LTF-208	ENST00000493056	PNN	Q9H307	717 aa	Known RBP	10.71	□□□□□ -0.69
LTF-208	ENST00000493056	CCNL1	Q9UK58	526 aa	Predicted RBP	10.71	□□□□□ -0.69
LTF-208	ENST00000493056	PAPPA	Q13219	1627 aa		10.7	□□□□□ -0.7
LTF-208	ENST00000493056	NEFM	P07197	916 aa		10.7	□□□□□ -0.7
LTF-208	ENST00000493056	ZNF530	Q6P9A1	599 aa	Predicted RBP	10.7	□□□□□ -0.7
LTF-208	ENST00000493056	TFCP2L1	Q9NZI6	479 aa		10.7	□□□□□ -0.7
LTF-208	ENST00000493056	TUBGCP6	Q96RT7	1819 aa		10.7	□□□□□ -0.7
LTF-208	ENST00000493056	DCAF8L1	A6NGE4	600 aa		10.69	□□□□□ -0.7
LTF-208	ENST00000493056	CABP4	P57796	275 aa		10.69	□□□□□ -0.7
LTF-208	ENST00000493056	RALBP1	Q15311	655 aa		10.69	□□□□□ -0.7
LTF-208	ENST00000493056	PIGB	Q92521	554 aa		10.69	□□□□□ -0.7
LTF-208	ENST00000493056	SRCAP	Q6ZRS2	3230 aa		10.68	□□□□□ -0.7
LTF-208	ENST00000493056	PALLD	Q8WX93	1383 aa		10.68	□□□□□ -0.7
LTF-208	ENST00000493056	COL24A1	Q17RW2	1714 aa		10.68	□□□□□ -0.7
LTF-208	ENST00000493056	U2SURP	O15042	1029 aa	Known RBP	10.68	□□□□□ -0.7
LTF-208	ENST00000493056	FCHSD2	O94868	740 aa		10.68	□□□□□ -0.7
LTF-208	ENST00000493056	PPP2R1A	P30153	589 aa		10.68	□□□□□ -0.7
LTF-208	ENST00000493056	CNGB1	Q14028	1251 aa	Predicted RBP	10.68	□□□□□ -0.7
LTF-208	ENST00000493056	MTFR1L	Q9H019	292 aa		10.68	□□□□□ -0.7
LTF-208	ENST00000493056	LRRC4B	Q9NT99	713 aa		10.68	□□□□□ -0.7
LTF-208	ENST00000493056	PPP1R1B	Q9UD71	204 aa	Predicted RBP	10.68	□□□□□ -0.7
LTF-208	ENST00000493056	UBR3	Q6ZT12	1888 aa		10.68	□□□□□ -0.7
LTF-208	ENST00000493056	DLG5	Q8TDM6	1919 aa		10.67	□□□□□ -0.7
LTF-208	ENST00000493056	AEBP1	Q8IUX7	1158 aa		10.67	□□□□□ -0.7
LTF-208	ENST00000493056	GAS2L2	Q8NHY3	880 aa		10.67	□□□□□ -0.7
LTF-208	ENST00000493056	AKT1S1	Q96B36	256 aa		10.67	□□□□□ -0.7
LTF-208	ENST00000493056	C4B	P0C0L5	1744 aa		10.67	□□□□□ -0.7
LTF-208	ENST00000493056	HMOX1	P09601	288 aa		10.66	□□□□□ -0.7
LTF-208	ENST00000493056	COL5A3	P25940	1745 aa	Predicted RBP	10.65	□□□□□ -0.7
LTF-208	ENST00000493056	LOC102724428	A0A0B4J2F2	783 aa		10.65	□□□□□ -0.7
LTF-208	ENST00000493056	ATP6V1A	P38606	617 aa		10.65	□□□□□ -0.7
LTF-208	ENST00000493056	SIK1	P57059	783 aa		10.65	□□□□□ -0.7

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