RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 KIF16BQ96L93 1317 aa18.01■□□□□ 0.47
PTPN7-216ENST00000492977 ZNF219Q9P2Y4 722 aaPredicted RBP18■□□□□ 0.47
PTPN7-216ENST00000492977 ALS2Q96Q42 1657 aa18■□□□□ 0.47
PTPN7-216ENST00000492977 CHL1O00533 1208 aa18■□□□□ 0.47
PTPN7-216ENST00000492977 RLBP1P12271 317 aa18■□□□□ 0.47
PTPN7-216ENST00000492977 LMOD2Q6P5Q4 547 aa18■□□□□ 0.47
PTPN7-216ENST00000492977 DZIP1LQ8IYY4 767 aaKnown RBP18■□□□□ 0.47
PTPN7-216ENST00000492977 RTF1Q92541 710 aaKnown RBP18■□□□□ 0.47
PTPN7-216ENST00000492977 CLUAP1Q96AJ1 413 aa18■□□□□ 0.47
PTPN7-216ENST00000492977 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
PTPN7-216ENST00000492977 RBM19Q9Y4C8 960 aaKnown RBP18■□□□□ 0.47
PTPN7-216ENST00000492977 XIRP1Q702N8 1843 aaKnown RBP17.99■□□□□ 0.47
PTPN7-216ENST00000492977 NPHP3Q7Z494 1330 aa17.99■□□□□ 0.47
PTPN7-216ENST00000492977 TCERG1O14776 1098 aaKnown RBP17.98■□□□□ 0.47
PTPN7-216ENST00000492977 ATF7IPQ6VMQ6 1270 aa17.98■□□□□ 0.47
PTPN7-216ENST00000492977 MCM10Q7L590 875 aa17.98■□□□□ 0.47
PTPN7-216ENST00000492977 FTSJ3Q8IY81 847 aaKnown RBP17.98■□□□□ 0.47
PTPN7-216ENST00000492977 NOB1Q9ULX3 412 aaKnown RBP17.98■□□□□ 0.47
PTPN7-216ENST00000492977 HAP1P54257 671 aaPredicted RBP17.97■□□□□ 0.47
PTPN7-216ENST00000492977 MVPQ14764 893 aaKnown RBP17.97■□□□□ 0.47
PTPN7-216ENST00000492977 TWISTNBQ3B726 338 aaPredicted RBP17.97■□□□□ 0.47
PTPN7-216ENST00000492977 CRB1P82279 1406 aa17.97■□□□□ 0.47
PTPN7-216ENST00000492977 TRIM27P14373 513 aa17.96■□□□□ 0.47
PTPN7-216ENST00000492977 TNNQ9UQP3 1299 aa17.96■□□□□ 0.47
PTPN7-216ENST00000492977 TSPYL6Q8N831 410 aa17.96■□□□□ 0.46
PTPN7-216ENST00000492977 ARHGAP45Q92619 1136 aa17.96■□□□□ 0.46
PTPN7-216ENST00000492977 KIAA0232Q92628 1395 aa17.95■□□□□ 0.46
PTPN7-216ENST00000492977 GNAT3A8MTJ3 354 aa17.95■□□□□ 0.46
PTPN7-216ENST00000492977 C8orf58Q8NAV2 365 aa17.95■□□□□ 0.46
PTPN7-216ENST00000492977 NBPF6Q5VWK0 638 aa17.94■□□□□ 0.46
PTPN7-216ENST00000492977 MRPL50Q8N5N7 158 aaKnown RBP17.94■□□□□ 0.46
PTPN7-216ENST00000492977 NBPF4Q96M43 638 aa17.94■□□□□ 0.46
PTPN7-216ENST00000492977 ZBTB7CA1YPR0 619 aa17.93■□□□□ 0.46
PTPN7-216ENST00000492977 DDX19BQ9UMR2 479 aa17.92■□□□□ 0.46
PTPN7-216ENST00000492977 NCAPD2Q15021 1401 aa17.92■□□□□ 0.46
PTPN7-216ENST00000492977 TNS3Q68CZ2 1445 aa17.92■□□□□ 0.46
PTPN7-216ENST00000492977 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
PTPN7-216ENST00000492977 MED1Q15648 1581 aaPredicted RBP17.92■□□□□ 0.46
PTPN7-216ENST00000492977 ZNF335Q9H4Z2 1342 aaPredicted RBP17.92■□□□□ 0.46
PTPN7-216ENST00000492977 ELL2O00472 640 aaPredicted RBP17.91■□□□□ 0.46
PTPN7-216ENST00000492977 PXDNQ92626 1479 aa17.91■□□□□ 0.46
PTPN7-216ENST00000492977 USHBP1Q8N6Y0 703 aa17.91■□□□□ 0.46
PTPN7-216ENST00000492977 ANKRD24Q8TF21 1146 aa17.91■□□□□ 0.46
PTPN7-216ENST00000492977 DDX17Q92841 729 aaKnown RBP17.91■□□□□ 0.46
PTPN7-216ENST00000492977 BABAM1Q9NWV8 329 aa17.91■□□□□ 0.46
PTPN7-216ENST00000492977 SPATA31A3Q5VYP0 1347 aa17.9■□□□□ 0.46
PTPN7-216ENST00000492977 LRRC37A3O60309 1634 aa17.9■□□□□ 0.46
PTPN7-216ENST00000492977 BRINP3Q76B58 766 aa17.9■□□□□ 0.46
PTPN7-216ENST00000492977 IGHDP01880 384 aa17.89■□□□□ 0.45
PTPN7-216ENST00000492977 SLAIN2Q9P270 581 aa17.89■□□□□ 0.45
PTPN7-216ENST00000492977 RGPD2P0DJD1 1756 aa17.89■□□□□ 0.45
PTPN7-216ENST00000492977 AMOTQ4VCS5 1084 aa17.88■□□□□ 0.45
PTPN7-216ENST00000492977 ITPRIPQ8IWB1 547 aa17.88■□□□□ 0.45
PTPN7-216ENST00000492977 TSPYL4Q9UJ04 414 aa17.88■□□□□ 0.45
PTPN7-216ENST00000492977 CAMTA1Q9Y6Y1 1673 aa17.88■□□□□ 0.45
PTPN7-216ENST00000492977 PLEKHG5O94827 1062 aa17.87■□□□□ 0.45
PTPN7-216ENST00000492977 PLEKHO1Q53GL0 409 aaPredicted RBP17.87■□□□□ 0.45
PTPN7-216ENST00000492977 TMEM57Q8N5G2 664 aa17.87■□□□□ 0.45
PTPN7-216ENST00000492977 IL17REQ8NFR9 667 aa17.87■□□□□ 0.45
PTPN7-216ENST00000492977 LRRC59Q96AG4 307 aaKnown RBP17.87■□□□□ 0.45
PTPN7-216ENST00000492977 CHMP4BQ9H444 224 aaKnown RBP17.87■□□□□ 0.45
PTPN7-216ENST00000492977 AXIN2Q9Y2T1 843 aa17.87■□□□□ 0.45
PTPN7-216ENST00000492977 PCDHB15Q9Y5E8 787 aa17.87■□□□□ 0.45
PTPN7-216ENST00000492977 ABCC6O95255 1503 aa17.87■□□□□ 0.45
PTPN7-216ENST00000492977 ZC3H6P61129 1189 aaKnown RBP17.87■□□□□ 0.45
PTPN7-216ENST00000492977 API5Q9BZZ5 524 aaKnown RBP17.87■□□□□ 0.45
PTPN7-216ENST00000492977 RWDD1Q9H446 243 aaPredicted RBP17.87■□□□□ 0.45
PTPN7-216ENST00000492977 SOS1Q07889 1333 aaPredicted RBP17.85■□□□□ 0.45
PTPN7-216ENST00000492977 TAF7Q15545 349 aaPredicted RBP17.85■□□□□ 0.45
PTPN7-216ENST00000492977 ERBB3P21860 1342 aa17.85■□□□□ 0.45
PTPN7-216ENST00000492977 RGPD5Q99666 1765 aa17.85■□□□□ 0.45
PTPN7-216ENST00000492977 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
PTPN7-216ENST00000492977 ZBTB40Q9NUA8 1239 aa17.84■□□□□ 0.45
PTPN7-216ENST00000492977 MIS18AQ9NYP9 233 aa17.84■□□□□ 0.45
PTPN7-216ENST00000492977 ABCC4O15439 1325 aa17.84■□□□□ 0.45
PTPN7-216ENST00000492977 SOS2Q07890 1332 aaPredicted RBP17.84■□□□□ 0.45
PTPN7-216ENST00000492977 CRYBG1Q9Y4K1 1723 aa17.84■□□□□ 0.45
PTPN7-216ENST00000492977 CPDO75976 1380 aa17.84■□□□□ 0.45
PTPN7-216ENST00000492977 COL18A1P39060 1754 aa17.83■□□□□ 0.45
PTPN7-216ENST00000492977 KRT24Q2M2I5 525 aa17.83■□□□□ 0.45
PTPN7-216ENST00000492977 AKAP4Q5JQC9 854 aa17.83■□□□□ 0.45
PTPN7-216ENST00000492977 LMO7Q8WWI1 1683 aa17.83■□□□□ 0.44
PTPN7-216ENST00000492977 ZNF530Q6P9A1 599 aaPredicted RBP17.82■□□□□ 0.44
PTPN7-216ENST00000492977 HDAC1Q13547 482 aaPredicted RBP17.81■□□□□ 0.44
PTPN7-216ENST00000492977 PTPRCP08575 1304 aa17.81■□□□□ 0.44
PTPN7-216ENST00000492977 CABLES1Q8TDN4 633 aa17.8■□□□□ 0.44
PTPN7-216ENST00000492977 PLEKHG2Q9H7P9 1386 aa17.8■□□□□ 0.44
PTPN7-216ENST00000492977 ZBTB7BO15156 539 aaPredicted RBP17.79■□□□□ 0.44
PTPN7-216ENST00000492977 PDE4AP27815 886 aa17.79■□□□□ 0.44
PTPN7-216ENST00000492977 C1orf141Q5JVX7 400 aa17.79■□□□□ 0.44
PTPN7-216ENST00000492977 FAM208AQ9UK61 1670 aaKnown RBP17.79■□□□□ 0.44
PTPN7-216ENST00000492977 OVOS2A0A0G2JMS6 1433 aa17.79■□□□□ 0.44
PTPN7-216ENST00000492977 SKAP1Q86WV1 359 aa17.79■□□□□ 0.44
PTPN7-216ENST00000492977 BACH2Q9BYV9 841 aa17.79■□□□□ 0.44
PTPN7-216ENST00000492977 NLRP2Q9NX02 1062 aa17.78■□□□□ 0.44
PTPN7-216ENST00000492977 CCDC30Q5VVM6 783 aa17.77■□□□□ 0.44
PTPN7-216ENST00000492977 INTS3Q68E01 1043 aaKnown RBP17.77■□□□□ 0.44
PTPN7-216ENST00000492977 RAPGEF4Q8WZA2 1011 aa17.77■□□□□ 0.44
PTPN7-216ENST00000492977 LGR6Q9HBX8 967 aa17.77■□□□□ 0.44
PTPN7-216ENST00000492977 RNMTO43148 476 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms