RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 BRWD3Q6RI45 1802 aa18.75■□□□□ 0.59
CCM2-217ENST00000492883 HMOX1P09601 288 aa18.74■□□□□ 0.59
CCM2-217ENST00000492883 LRRC37A3O60309 1634 aa18.74■□□□□ 0.59
CCM2-217ENST00000492883 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
CCM2-217ENST00000492883 PLEKHO1Q53GL0 409 aaPredicted RBP18.73■□□□□ 0.59
CCM2-217ENST00000492883 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.73■□□□□ 0.59
CCM2-217ENST00000492883 PCDH11XQ9BZA7 1347 aa18.73■□□□□ 0.59
CCM2-217ENST00000492883 PCDH11YQ9BZA8 1340 aa18.73■□□□□ 0.59
CCM2-217ENST00000492883 APBA3O96018 575 aa18.72■□□□□ 0.59
CCM2-217ENST00000492883 BAG6P46379 1132 aa18.72■□□□□ 0.59
CCM2-217ENST00000492883 ACSBG1Q96GR2 724 aa18.72■□□□□ 0.59
CCM2-217ENST00000492883 PRKRIP1Q9H875 184 aaPredicted RBP18.72■□□□□ 0.59
CCM2-217ENST00000492883 MYBBP1AQ9BQG0 1328 aaKnown RBP18.72■□□□□ 0.59
CCM2-217ENST00000492883 BCL11BQ9C0K0 894 aaPredicted RBP18.71■□□□□ 0.59
CCM2-217ENST00000492883 RGPD2P0DJD1 1756 aa18.7■□□□□ 0.58
CCM2-217ENST00000492883 BCL9O00512 1426 aa18.7■□□□□ 0.58
CCM2-217ENST00000492883 CYP27B1O15528 508 aa18.7■□□□□ 0.58
CCM2-217ENST00000492883 U2AF1L5P0DN76 240 aaPredicted RBP18.7■□□□□ 0.58
CCM2-217ENST00000492883 U2AF1Q01081 240 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCM2-217ENST00000492883 AMOTQ4VCS5 1084 aa18.7■□□□□ 0.58
CCM2-217ENST00000492883 DEFB132Q7Z7B7 95 aa18.7■□□□□ 0.58
CCM2-217ENST00000492883 KCNQ2O43526 872 aa18.69■□□□□ 0.58
CCM2-217ENST00000492883 IFNL2Q8IZJ0 200 aa18.69■□□□□ 0.58
CCM2-217ENST00000492883 KDRP35968 1356 aa18.68■□□□□ 0.58
CCM2-217ENST00000492883 SYTL4Q96C24 671 aaPredicted RBP18.68■□□□□ 0.58
CCM2-217ENST00000492883 COL3A1P02461 1466 aaPredicted RBP18.68■□□□□ 0.58
CCM2-217ENST00000492883 WNK3Q9BYP7 1800 aa18.67■□□□□ 0.58
CCM2-217ENST00000492883 ANP32CO43423 234 aa18.67■□□□□ 0.58
CCM2-217ENST00000492883 PRIM1P49642 420 aaKnown RBP18.67■□□□□ 0.58
CCM2-217ENST00000492883 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
CCM2-217ENST00000492883 PTF1AQ7RTS3 328 aa18.67■□□□□ 0.58
CCM2-217ENST00000492883 PHKG2P15735 406 aa18.66■□□□□ 0.58
CCM2-217ENST00000492883 ZNF530Q6P9A1 599 aaPredicted RBP18.66■□□□□ 0.58
CCM2-217ENST00000492883 PLEKHG2Q9H7P9 1386 aa18.66■□□□□ 0.58
CCM2-217ENST00000492883 C1orf141Q5JVX7 400 aa18.65■□□□□ 0.58
CCM2-217ENST00000492883 HSP90AB1P08238 724 aaKnown RBP18.64■□□□□ 0.57
CCM2-217ENST00000492883 NKX1-1Q15270 411 aaPredicted RBP18.64■□□□□ 0.57
CCM2-217ENST00000492883 FCHSD2O94868 740 aa18.63■□□□□ 0.57
CCM2-217ENST00000492883 PRKAR2BP31323 418 aa18.63■□□□□ 0.57
CCM2-217ENST00000492883 EZH2Q15910 746 aaKnown RBP18.63■□□□□ 0.57
CCM2-217ENST00000492883 RSPH6AQ9H0K4 717 aa18.63■□□□□ 0.57
CCM2-217ENST00000492883 MTHFSDQ2M296 383 aaKnown RBP18.62■□□□□ 0.57
CCM2-217ENST00000492883 PLSCR1O15162 318 aa18.61■□□□□ 0.57
CCM2-217ENST00000492883 MPRIPQ6WCQ1 1025 aa18.61■□□□□ 0.57
CCM2-217ENST00000492883 CAMKK2Q96RR4 588 aa18.61■□□□□ 0.57
CCM2-217ENST00000492883 NEFMP07197 916 aa18.6■□□□□ 0.57
CCM2-217ENST00000492883 AKAP4Q5JQC9 854 aa18.6■□□□□ 0.57
CCM2-217ENST00000492883 DCAF5Q96JK2 942 aa18.6■□□□□ 0.57
CCM2-217ENST00000492883 RGPD1P0DJD0 1748 aa18.6■□□□□ 0.57
CCM2-217ENST00000492883 GAS2L2Q8NHY3 880 aa18.59■□□□□ 0.57
CCM2-217ENST00000492883 PNNQ9H307 717 aaKnown RBP18.59■□□□□ 0.57
CCM2-217ENST00000492883 WDR43Q15061 677 aaKnown RBP eCLIP18.58■□□□□ 0.56
CCM2-217ENST00000492883 PHACTR3Q96KR7 559 aa18.58■□□□□ 0.56
CCM2-217ENST00000492883 TMOD3Q9NYL9 352 aa18.57■□□□□ 0.56
CCM2-217ENST00000492883 ERVV-2B6SEH9 535 aa18.56■□□□□ 0.56
CCM2-217ENST00000492883 CABP4P57796 275 aa18.56■□□□□ 0.56
CCM2-217ENST00000492883 TXNRD1Q16881 649 aa18.55■□□□□ 0.56
CCM2-217ENST00000492883 PIGBQ92521 554 aa18.55■□□□□ 0.56
CCM2-217ENST00000492883 PKD1L3Q7Z443 1732 aa18.54■□□□□ 0.56
CCM2-217ENST00000492883 GNAT3A8MTJ3 354 aa18.53■□□□□ 0.56
CCM2-217ENST00000492883 PROM2Q8N271 834 aa18.53■□□□□ 0.56
CCM2-217ENST00000492883 SHANK3Q9BYB0 1731 aa18.53■□□□□ 0.56
CCM2-217ENST00000492883 LGR6Q9HBX8 967 aa18.53■□□□□ 0.56
CCM2-217ENST00000492883 MAPK8IP3Q9UPT6 1336 aa18.52■□□□□ 0.56
CCM2-217ENST00000492883 RNMTO43148 476 aaKnown RBP18.52■□□□□ 0.56
CCM2-217ENST00000492883 NBPF14Q5TI25 921 aa18.52■□□□□ 0.56
CCM2-217ENST00000492883 NFATC2IPQ8NCF5 419 aa18.52■□□□□ 0.56
CCM2-217ENST00000492883 SMARCC1Q92922 1105 aaPredicted RBP18.52■□□□□ 0.56
CCM2-217ENST00000492883 PLEKHF1Q96S99 279 aa18.52■□□□□ 0.56
CCM2-217ENST00000492883 ADAMTS8Q9UP79 889 aa18.52■□□□□ 0.56
CCM2-217ENST00000492883 KDM6AO15550 1401 aaPredicted RBP18.51■□□□□ 0.55
CCM2-217ENST00000492883 CCDC184Q52MB2 194 aa18.51■□□□□ 0.55
CCM2-217ENST00000492883 RTF1Q92541 710 aaKnown RBP18.51■□□□□ 0.55
CCM2-217ENST00000492883 MRS2Q9HD23 443 aa18.51■□□□□ 0.55
CCM2-217ENST00000492883 TNS1Q9HBL0 1735 aaKnown RBP18.51■□□□□ 0.55
CCM2-217ENST00000492883 NHSQ6T4R5 1651 aa18.5■□□□□ 0.55
CCM2-217ENST00000492883 MAP3K5Q99683 1374 aa18.5■□□□□ 0.55
CCM2-217ENST00000492883 EP400Q96L91 3159 aa18.5■□□□□ 0.55
CCM2-217ENST00000492883 SLC27A3Q5K4L6 730 aa18.49■□□□□ 0.55
CCM2-217ENST00000492883 CCDC146Q8IYE0 955 aa18.49■□□□□ 0.55
CCM2-217ENST00000492883 ASAP1Q9ULH1 1129 aa18.49■□□□□ 0.55
CCM2-217ENST00000492883 PALLDQ8WX93 1383 aa18.48■□□□□ 0.55
CCM2-217ENST00000492883 IL17REQ8NFR9 667 aa18.48■□□□□ 0.55
CCM2-217ENST00000492883 SLC52A2Q9HAB3 445 aa18.48■□□□□ 0.55
CCM2-217ENST00000492883 ATG3Q9NT62 314 aa18.48■□□□□ 0.55
CCM2-217ENST00000492883 CCNL1Q9UK58 526 aaPredicted RBP18.48■□□□□ 0.55
CCM2-217ENST00000492883 SBF2Q86WG5 1849 aa18.48■□□□□ 0.55
CCM2-217ENST00000492883 KCNQ4P56696 695 aa18.47■□□□□ 0.55
CCM2-217ENST00000492883 TEFQ10587 303 aa18.47■□□□□ 0.55
CCM2-217ENST00000492883 NFE2L2Q16236 605 aa18.47■□□□□ 0.55
CCM2-217ENST00000492883 RUNDC1Q96C34 613 aa18.47■□□□□ 0.55
CCM2-217ENST00000492883 DOT1LQ8TEK3 1739 aa18.46■□□□□ 0.55
CCM2-217ENST00000492883 HTATSF1O43719 755 aaKnown RBP18.46■□□□□ 0.55
CCM2-217ENST00000492883 LRRC4BQ9NT99 713 aa18.46■□□□□ 0.55
CCM2-217ENST00000492883 R3HDM1Q15032 1099 aaKnown RBP18.45■□□□□ 0.54
CCM2-217ENST00000492883 MCM10Q7L590 875 aa18.45■□□□□ 0.54
CCM2-217ENST00000492883 PSDA5PKW4 1024 aaPredicted RBP18.44■□□□□ 0.54
CCM2-217ENST00000492883 DCTN1Q14203 1278 aa18.44■□□□□ 0.54
CCM2-217ENST00000492883 PNISRQ8TF01 805 aaKnown RBP18.44■□□□□ 0.54
CCM2-217ENST00000492883 RBM42Q9BTD8 480 aaKnown RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms