RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 CCDC30Q5VVM6 783 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 ZKSCAN2Q63HK3 967 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 SBNO1A3KN83 1393 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 TRIM37O94972 964 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 STARD3NLO95772 234 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 APBA3O96018 575 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 UNC5CLQ8IV45 518 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 SEPT12Q8IYM1 358 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 PANK1Q8TE04 598 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 VWDEQ8N2E2 1590 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 FRAT2O75474 233 aaPredicted RBP5.63□□□□□ -1.51
TRA2B-215ENST00000492417 ZNF772Q68DY9 489 aaPredicted RBP5.63□□□□□ -1.51
TRA2B-215ENST00000492417 KIF6Q6ZMV9 814 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 ZBTB3Q9H5J0 574 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 GPTP24298 496 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 DEKP35659 375 aaKnown RBP5.63□□□□□ -1.51
TRA2B-215ENST00000492417 GORABQ5T7V8 394 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 AK7Q96M32 723 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 FOXD4L1Q9NU39 408 aa5.63□□□□□ -1.51
TRA2B-215ENST00000492417 TMEM131LA2VDJ0 1609 aa5.62□□□□□ -1.51
TRA2B-215ENST00000492417 ZBTB4Q9P1Z0 1013 aaPredicted RBP5.62□□□□□ -1.51
TRA2B-215ENST00000492417 JCADQ9P266 1359 aa5.62□□□□□ -1.51
TRA2B-215ENST00000492417 REREQ9P2R6 1566 aa5.62□□□□□ -1.51
TRA2B-215ENST00000492417 AKAP4Q5JQC9 854 aa5.62□□□□□ -1.51
TRA2B-215ENST00000492417 JARID2Q92833 1246 aaPredicted RBP5.62□□□□□ -1.51
TRA2B-215ENST00000492417 FMNL2Q96PY5 1086 aa5.62□□□□□ -1.51
TRA2B-215ENST00000492417 ZNF219Q9P2Y4 722 aaPredicted RBP5.62□□□□□ -1.51
TRA2B-215ENST00000492417 ZPR1O75312 459 aa5.62□□□□□ -1.51
TRA2B-215ENST00000492417 TFCP2L1Q9NZI6 479 aa5.62□□□□□ -1.51
TRA2B-215ENST00000492417 F6X3S4 739 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 RSPH6AQ9H0K4 717 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 CHMP4BQ9H444 224 aaKnown RBP5.61□□□□□ -1.51
TRA2B-215ENST00000492417 ERBB3P21860 1342 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 DEPDC5O75140 1603 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 HSP90AA1P07900 732 aaKnown RBP5.61□□□□□ -1.51
TRA2B-215ENST00000492417 DZIP1LQ8IYY4 767 aaKnown RBP5.61□□□□□ -1.51
TRA2B-215ENST00000492417 C1orf115Q9H7X2 142 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 MBIPQ9NS73 344 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 TAOK2Q9UL54 1235 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 TBC1D2BQ9UPU7 963 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 PARD3Q8TEW0 1356 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 RNMTO43148 476 aaKnown RBP5.61□□□□□ -1.51
TRA2B-215ENST00000492417 KRT27Q7Z3Y8 459 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 FBXW7Q969H0 707 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 UPF2Q9HAU5 1272 aaKnown RBP5.61□□□□□ -1.51
TRA2B-215ENST00000492417 NOB1Q9ULX3 412 aaKnown RBP5.61□□□□□ -1.51
TRA2B-215ENST00000492417 MROH2AA6NES4 1674 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 PCDH11XQ9BZA7 1347 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 PCDH11YQ9BZA8 1340 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 PTCH1Q13635 1447 aa5.61□□□□□ -1.51
TRA2B-215ENST00000492417 ATP5J2-PTCD1G3V325 749 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 WDR63Q8IWG1 891 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 EXOC6Q8TAG9 804 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 DCAF5Q96JK2 942 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 CRBNQ96SW2 442 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 API5Q9BZZ5 524 aaKnown RBP5.6□□□□□ -1.51
TRA2B-215ENST00000492417 WDR17Q8IZU2 1322 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 CARD10Q9BWT7 1032 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 CCNL1Q9UK58 526 aaPredicted RBP5.6□□□□□ -1.51
TRA2B-215ENST00000492417 TNS3Q68CZ2 1445 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 ANKARQ7Z5J8 1434 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 MYO3AQ8NEV4 1616 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 RFC4P35249 363 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 FBXO41Q8TF61 875 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 ARHGAP23Q9P227 1491 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 SIGLEC1Q9BZZ2 1709 aa5.6□□□□□ -1.51
TRA2B-215ENST00000492417 KCNQ3O43525 872 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 GJD4Q96KN9 370 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-215ENST00000492417 SOS2Q07890 1332 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-215ENST00000492417 FANCIQ9NVI1 1328 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 GNPATO15228 680 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 SNRPA1P09661 255 aaKnown RBP5.59□□□□□ -1.51
TRA2B-215ENST00000492417 CFAP44Q96MT7 982 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 NAP1L5Q96NT1 182 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-215ENST00000492417 CDCA7Q9BWT1 371 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-215ENST00000492417 MYO5BQ9ULV0 1848 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 SLIT1O75093 1534 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 POLR3AO14802 1390 aaPredicted RBP5.59□□□□□ -1.51
TRA2B-215ENST00000492417 KCNJ4P48050 445 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 SLFN5Q08AF3 891 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 CCDC24Q8N4L8 307 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 TSPYL6Q8N831 410 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 C8orf58Q8NAV2 365 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 SSH1Q8WYL5 1049 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 MYD88Q99836 296 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 TRPM1Q7Z4N2 1603 aa5.59□□□□□ -1.51
TRA2B-215ENST00000492417 INSRP06213 1382 aa5.59□□□□□ -1.52
TRA2B-215ENST00000492417 A1BGP04217 495 aa5.59□□□□□ -1.52
TRA2B-215ENST00000492417 UBTFL1P0CB47 393 aaPredicted RBP5.59□□□□□ -1.52
TRA2B-215ENST00000492417 BAG6P46379 1132 aa5.59□□□□□ -1.52
TRA2B-215ENST00000492417 RRP1P56182 461 aaKnown RBP5.59□□□□□ -1.52
TRA2B-215ENST00000492417 RBM6P78332 1123 aaKnown RBP5.59□□□□□ -1.52
TRA2B-215ENST00000492417 DNAJC10Q8IXB1 793 aa5.59□□□□□ -1.52
TRA2B-215ENST00000492417 TRIM44Q96DX7 344 aaPredicted RBP5.59□□□□□ -1.52
TRA2B-215ENST00000492417 IFT57Q9NWB7 429 aa5.59□□□□□ -1.52
TRA2B-215ENST00000492417 ASAP1Q9ULH1 1129 aa5.59□□□□□ -1.52
TRA2B-215ENST00000492417 TULP4Q9NRJ4 1543 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 ATP7BP35670 1465 aa5.58□□□□□ -1.52
TRA2B-215ENST00000492417 KDM5AP29375 1690 aaKnown RBP5.58□□□□□ -1.52
TRA2B-215ENST00000492417 PHKG2P15735 406 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.1 ms