RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 GOLGA6L3A6NEY3 463 aa20.06■□□□□ 0.8
SEMA4D-220ENST00000492386 USP31Q70CQ4 1352 aa20.06■□□□□ 0.8
SEMA4D-220ENST00000492386 XRCC6P12956 609 aaKnown RBP eCLIP20.06■□□□□ 0.8
SEMA4D-220ENST00000492386 TNPO1Q92973 898 aaKnown RBP20.05■□□□□ 0.8
SEMA4D-220ENST00000492386 CRB1P82279 1406 aa20.05■□□□□ 0.8
SEMA4D-220ENST00000492386 FMN2Q9NZ56 1722 aa20.05■□□□□ 0.8
SEMA4D-220ENST00000492386 RBM42Q9BTD8 480 aaKnown RBP20.05■□□□□ 0.8
SEMA4D-220ENST00000492386 ANO8Q9HCE9 1232 aaPredicted RBP20.05■□□□□ 0.8
SEMA4D-220ENST00000492386 MSH6P52701 1360 aa20.04■□□□□ 0.8
SEMA4D-220ENST00000492386 RAB3GAP1Q15042 981 aa20.04■□□□□ 0.8
SEMA4D-220ENST00000492386 TTC22Q5TAA0 569 aa20.04■□□□□ 0.8
SEMA4D-220ENST00000492386 SSH2Q76I76 1423 aa20.04■□□□□ 0.8
SEMA4D-220ENST00000492386 PLEKHG1Q9ULL1 1385 aa20.04■□□□□ 0.8
SEMA4D-220ENST00000492386 NUTM2FA1L443 756 aa20.03■□□□□ 0.8
SEMA4D-220ENST00000492386 K7ELQ4 463 aaPredicted RBP20.03■□□□□ 0.8
SEMA4D-220ENST00000492386 CEP85Q6P2H3 762 aa20.03■□□□□ 0.8
SEMA4D-220ENST00000492386 RPAP2Q8IXW5 612 aaPredicted RBP20.03■□□□□ 0.8
SEMA4D-220ENST00000492386 PTPRCP08575 1304 aa20.03■□□□□ 0.8
SEMA4D-220ENST00000492386 C16orf71Q8IYS4 520 aaPredicted RBP20.03■□□□□ 0.8
SEMA4D-220ENST00000492386 RTL1A6NKG5 1358 aa20.03■□□□□ 0.8
SEMA4D-220ENST00000492386 LTKP29376 864 aa20.02■□□□□ 0.8
SEMA4D-220ENST00000492386 RIMS1Q86UR5 1692 aaKnown RBP20.02■□□□□ 0.79
SEMA4D-220ENST00000492386 PTPRUQ92729 1446 aa20.01■□□□□ 0.79
SEMA4D-220ENST00000492386 ARHGEF10O15013 1369 aa20.01■□□□□ 0.79
SEMA4D-220ENST00000492386 OTUD7AQ8TE49 926 aaPredicted RBP20■□□□□ 0.79
SEMA4D-220ENST00000492386 ARXQ96QS3 562 aa20■□□□□ 0.79
SEMA4D-220ENST00000492386 MEIS3Q99687 375 aa20■□□□□ 0.79
SEMA4D-220ENST00000492386 MAP3K19Q56UN5 1328 aa19.99■□□□□ 0.79
SEMA4D-220ENST00000492386 EIF5BO60841 1220 aaKnown RBP19.98■□□□□ 0.79
SEMA4D-220ENST00000492386 HSP90AA1P07900 732 aaKnown RBP19.98■□□□□ 0.79
SEMA4D-220ENST00000492386 GAS2L2Q8NHY3 880 aa19.98■□□□□ 0.79
SEMA4D-220ENST00000492386 GBP4Q96PP9 640 aa19.98■□□□□ 0.79
SEMA4D-220ENST00000492386 FOXD4L1Q9NU39 408 aa19.98■□□□□ 0.79
SEMA4D-220ENST00000492386 SLC4A2P04920 1241 aa19.98■□□□□ 0.79
SEMA4D-220ENST00000492386 PANK2Q9BZ23 570 aa19.98■□□□□ 0.79
SEMA4D-220ENST00000492386 SOX12O15370 315 aa19.97■□□□□ 0.79
SEMA4D-220ENST00000492386 FOXO3O43524 673 aa19.97■□□□□ 0.79
SEMA4D-220ENST00000492386 MIS18AQ9NYP9 233 aa19.97■□□□□ 0.79
SEMA4D-220ENST00000492386 MTHFSDQ2M296 383 aaKnown RBP19.97■□□□□ 0.79
SEMA4D-220ENST00000492386 USP26Q9BXU7 913 aa19.97■□□□□ 0.79
SEMA4D-220ENST00000492386 KDRP35968 1356 aa19.96■□□□□ 0.79
SEMA4D-220ENST00000492386 TTC21AQ8NDW8 1320 aa19.96■□□□□ 0.79
SEMA4D-220ENST00000492386 SMARCA5O60264 1052 aaPredicted RBP19.96■□□□□ 0.79
SEMA4D-220ENST00000492386 RABEP1Q15276 862 aa19.95■□□□□ 0.78
SEMA4D-220ENST00000492386 RGPD8O14715 1765 aaPredicted RBP19.95■□□□□ 0.78
SEMA4D-220ENST00000492386 SBNO1A3KN83 1393 aa19.95■□□□□ 0.78
SEMA4D-220ENST00000492386 SDSP20132 328 aa19.95■□□□□ 0.78
SEMA4D-220ENST00000492386 MRE11P49959 708 aa19.95■□□□□ 0.78
SEMA4D-220ENST00000492386 SLC26A8Q96RN1 970 aa19.95■□□□□ 0.78
SEMA4D-220ENST00000492386 FLT4P35916 1363 aa19.95■□□□□ 0.78
SEMA4D-220ENST00000492386 RRAGDQ9NQL2 400 aaPredicted RBP19.94■□□□□ 0.78
SEMA4D-220ENST00000492386 CEP170BQ9Y4F5 1589 aaPredicted RBP19.94■□□□□ 0.78
SEMA4D-220ENST00000492386 G2E3Q7L622 706 aa19.94■□□□□ 0.78
SEMA4D-220ENST00000492386 TSPYL4Q9UJ04 414 aa19.93■□□□□ 0.78
SEMA4D-220ENST00000492386 ISY1Q9ULR0 285 aaKnown RBP19.93■□□□□ 0.78
SEMA4D-220ENST00000492386 PIK3C2AO00443 1686 aa19.93■□□□□ 0.78
SEMA4D-220ENST00000492386 APBB1O00213 710 aa19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 SSFA2P28290 1259 aa19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 SKOR2Q2VWA4 1001 aaPredicted RBP19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 CLEC17AQ6ZS10 378 aa19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 RTF1Q92541 710 aaKnown RBP19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 GRPEL1Q9HAV7 217 aa19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 AK9Q5TCS8 1911 aa19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 LRRC37A3O60309 1634 aa19.92■□□□□ 0.78
SEMA4D-220ENST00000492386 IGSF1Q8N6C5 1336 aa19.91■□□□□ 0.78
SEMA4D-220ENST00000492386 DIP2AQ14689 1571 aa19.91■□□□□ 0.78
SEMA4D-220ENST00000492386 F6X3S4 739 aa19.91■□□□□ 0.78
SEMA4D-220ENST00000492386 PTMSP20962 102 aa19.91■□□□□ 0.78
SEMA4D-220ENST00000492386 AMOTL2Q9Y2J4 779 aa19.91■□□□□ 0.78
SEMA4D-220ENST00000492386 EYA1Q99502 592 aa19.91■□□□□ 0.78
SEMA4D-220ENST00000492386 CCT4P50991 539 aaKnown RBP19.9■□□□□ 0.78
SEMA4D-220ENST00000492386 FAM208AQ9UK61 1670 aaKnown RBP19.9■□□□□ 0.78
SEMA4D-220ENST00000492386 HMMRO75330 724 aa19.9■□□□□ 0.78
SEMA4D-220ENST00000492386 CASC1Q6TDU7 716 aa19.89■□□□□ 0.77
SEMA4D-220ENST00000492386 SLC4A10Q6U841 1118 aa19.89■□□□□ 0.77
SEMA4D-220ENST00000492386 SLIT1O75093 1534 aa19.89■□□□□ 0.77
SEMA4D-220ENST00000492386 ARHGAP23Q9P227 1491 aa19.88■□□□□ 0.77
SEMA4D-220ENST00000492386 OSBPL3Q9H4L5 887 aa19.88■□□□□ 0.77
SEMA4D-220ENST00000492386 EID1Q9Y6B2 187 aa19.88■□□□□ 0.77
SEMA4D-220ENST00000492386 TUBGCP6Q96RT7 1819 aa19.88■□□□□ 0.77
SEMA4D-220ENST00000492386 XRN1Q8IZH2 1706 aaKnown RBP19.88■□□□□ 0.77
SEMA4D-220ENST00000492386 CEBPAP49715 358 aaPredicted RBP19.87■□□□□ 0.77
SEMA4D-220ENST00000492386 GAS2L3Q86XJ1 694 aa19.87■□□□□ 0.77
SEMA4D-220ENST00000492386 MARF1Q9Y4F3 1742 aaKnown RBP19.87■□□□□ 0.77
SEMA4D-220ENST00000492386 AMPHP49418 695 aa19.87■□□□□ 0.77
SEMA4D-220ENST00000492386 NGDNQ8NEJ9 315 aaKnown RBP19.87■□□□□ 0.77
SEMA4D-220ENST00000492386 TBX22Q9Y458 520 aa19.86■□□□□ 0.77
SEMA4D-220ENST00000492386 HTATSF1O43719 755 aaKnown RBP19.85■□□□□ 0.77
SEMA4D-220ENST00000492386 BAG4O95429 457 aaKnown RBP19.85■□□□□ 0.77
SEMA4D-220ENST00000492386 PDE1AP54750 535 aa19.85■□□□□ 0.77
SEMA4D-220ENST00000492386 CACNA1FO60840 1977 aa19.85■□□□□ 0.77
SEMA4D-220ENST00000492386 NWD1Q149M9 1564 aa19.85■□□□□ 0.77
SEMA4D-220ENST00000492386 REC8O95072 547 aa19.85■□□□□ 0.77
SEMA4D-220ENST00000492386 GNAI2P04899 355 aa19.85■□□□□ 0.77
SEMA4D-220ENST00000492386 N4BP2Q86UW6 1770 aaPredicted RBP19.84■□□□□ 0.77
SEMA4D-220ENST00000492386 STK31Q9BXU1 1019 aa19.84■□□□□ 0.77
SEMA4D-220ENST00000492386 ERC2O15083 957 aa19.84■□□□□ 0.77
SEMA4D-220ENST00000492386 CYP2E1P05181 493 aaPredicted RBP19.84■□□□□ 0.77
SEMA4D-220ENST00000492386 SALL3Q9BXA9 1300 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms