RNA–Protein interactions for RNA: ENST00000492314.3

PBX3-210, Transcript of PBX homeobox 3, humanhuman

Gene PBX3, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-210ENST00000492314 SLC27A3Q5K4L6 730 aa13.15□□□□□ -0.3
PBX3-210ENST00000492314 NLRP2Q9NX02 1062 aa13.14□□□□□ -0.31
PBX3-210ENST00000492314 GOLGB1Q14789 3259 aaKnown RBP13.14□□□□□ -0.31
PBX3-210ENST00000492314 PNPLA7Q6ZV29 1317 aa13.13□□□□□ -0.31
PBX3-210ENST00000492314 SHANK3Q9BYB0 1731 aa13.13□□□□□ -0.31
PBX3-210ENST00000492314 LTN1O94822 1766 aa13.13□□□□□ -0.31
PBX3-210ENST00000492314 CEP350Q5VT06 3117 aa13.13□□□□□ -0.31
PBX3-210ENST00000492314 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
PBX3-210ENST00000492314 GPR162Q16538 588 aa13.12□□□□□ -0.31
PBX3-210ENST00000492314 IFFO2Q5TF58 517 aa13.11□□□□□ -0.31
PBX3-210ENST00000492314 NME9Q86XW9 330 aa13.11□□□□□ -0.31
PBX3-210ENST00000492314 ANKRD24Q8TF21 1146 aa13.11□□□□□ -0.31
PBX3-210ENST00000492314 LY75O60449 1722 aa13.1□□□□□ -0.31
PBX3-210ENST00000492314 ROCK2O75116 1388 aaKnown RBP13.1□□□□□ -0.31
PBX3-210ENST00000492314 NSD2O96028 1365 aa13.1□□□□□ -0.31
PBX3-210ENST00000492314 KAT6BQ8WYB5 2073 aa13.09□□□□□ -0.31
PBX3-210ENST00000492314 FAM208AQ9UK61 1670 aaKnown RBP13.09□□□□□ -0.31
PBX3-210ENST00000492314 GIGYF1O75420 1035 aaPredicted RBP13.09□□□□□ -0.31
PBX3-210ENST00000492314 EDC4Q6P2E9 1401 aaKnown RBP13.09□□□□□ -0.31
PBX3-210ENST00000492314 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.09□□□□□ -0.31
PBX3-210ENST00000492314 NLGN2Q8NFZ4 835 aa13.09□□□□□ -0.31
PBX3-210ENST00000492314 ANKRD36BQ8N2N9 1353 aa13.08□□□□□ -0.31
PBX3-210ENST00000492314 SPDYE2BA6NHP3 402 aa13.08□□□□□ -0.32
PBX3-210ENST00000492314 SPDYE6P0CI01 402 aa13.08□□□□□ -0.32
PBX3-210ENST00000492314 POLD1P28340 1107 aa13.08□□□□□ -0.32
PBX3-210ENST00000492314 SPDYE2Q495Y8 402 aa13.08□□□□□ -0.32
PBX3-210ENST00000492314 IP6K1Q92551 441 aa13.08□□□□□ -0.32
PBX3-210ENST00000492314 YBX3P16989 372 aaKnown RBP eCLIP13.07□□□□□ -0.32
PBX3-210ENST00000492314 POTEHQ6S545 545 aa13.07□□□□□ -0.32
PBX3-210ENST00000492314 TRIM26Q12899 539 aaPredicted RBP13.06□□□□□ -0.32
PBX3-210ENST00000492314 PUS7Q96PZ0 661 aaKnown RBP13.06□□□□□ -0.32
PBX3-210ENST00000492314 SLC12A5Q9H2X9 1139 aa13.06□□□□□ -0.32
PBX3-210ENST00000492314 TFCP2L1Q9NZI6 479 aa13.06□□□□□ -0.32
PBX3-210ENST00000492314 DOT1LQ8TEK3 1739 aa13.05□□□□□ -0.32
PBX3-210ENST00000492314 GRIN3BO60391 1043 aa13.05□□□□□ -0.32
PBX3-210ENST00000492314 PRIM1P49642 420 aaKnown RBP13.05□□□□□ -0.32
PBX3-210ENST00000492314 KCNQ4P56696 695 aa13.05□□□□□ -0.32
PBX3-210ENST00000492314 REM2Q8IYK8 340 aaPredicted RBP13.05□□□□□ -0.32
PBX3-210ENST00000492314 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
PBX3-210ENST00000492314 A0A1W2PP64 1363 aa13.05□□□□□ -0.32
PBX3-210ENST00000492314 CHRDL2Q6WN34 429 aa13.03□□□□□ -0.32
PBX3-210ENST00000492314 HDGFL2Q7Z4V5 671 aaPredicted RBP13.03□□□□□ -0.32
PBX3-210ENST00000492314 COL23A1Q86Y22 540 aaPredicted RBP13.03□□□□□ -0.32
PBX3-210ENST00000492314 ADCY9O60503 1353 aa13.03□□□□□ -0.32
PBX3-210ENST00000492314 MEGF6O75095 1541 aa13.03□□□□□ -0.32
PBX3-210ENST00000492314 TERF2IPQ9NYB0 399 aa13.02□□□□□ -0.33
PBX3-210ENST00000492314 MAP3K19Q56UN5 1328 aa13.02□□□□□ -0.33
PBX3-210ENST00000492314 ATP10DQ9P241 1426 aa13.02□□□□□ -0.33
PBX3-210ENST00000492314 HOXC9P31274 260 aa13.01□□□□□ -0.33
PBX3-210ENST00000492314 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
PBX3-210ENST00000492314 ZCRB1Q8TBF4 217 aaKnown RBP13.01□□□□□ -0.33
PBX3-210ENST00000492314 CCNL1Q9UK58 526 aaPredicted RBP13.01□□□□□ -0.33
PBX3-210ENST00000492314 CD2APQ9Y5K6 639 aa13.01□□□□□ -0.33
PBX3-210ENST00000492314 TONSLQ96HA7 1378 aa13.01□□□□□ -0.33
PBX3-210ENST00000492314 PELP1Q8IZL8 1130 aaKnown RBP13□□□□□ -0.33
PBX3-210ENST00000492314 TMC1Q8TDI8 760 aa13□□□□□ -0.33
PBX3-210ENST00000492314 RGPD2P0DJD1 1756 aa12.99□□□□□ -0.33
PBX3-210ENST00000492314 CGNL1Q0VF96 1302 aa12.99□□□□□ -0.33
PBX3-210ENST00000492314 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
PBX3-210ENST00000492314 RTL1A6NKG5 1358 aa12.98□□□□□ -0.33
PBX3-210ENST00000492314 USP47Q96K76 1375 aa12.98□□□□□ -0.33
PBX3-210ENST00000492314 LTV1Q96GA3 475 aaPredicted RBP12.98□□□□□ -0.33
PBX3-210ENST00000492314 C5P01031 1676 aa12.98□□□□□ -0.33
PBX3-210ENST00000492314 TAF1LQ8IZX4 1826 aa12.97□□□□□ -0.33
PBX3-210ENST00000492314 NBPF6Q5VWK0 638 aa12.97□□□□□ -0.33
PBX3-210ENST00000492314 NBPF4Q96M43 638 aa12.97□□□□□ -0.33
PBX3-210ENST00000492314 TESK2Q96S53 571 aa12.97□□□□□ -0.33
PBX3-210ENST00000492314 CARD11Q9BXL7 1154 aa12.97□□□□□ -0.33
PBX3-210ENST00000492314 HMGB2P26583 209 aaKnown RBP12.96□□□□□ -0.33
PBX3-210ENST00000492314 FLAD1Q8NFF5 587 aa12.96□□□□□ -0.33
PBX3-210ENST00000492314 TOGARAM1Q9Y4F4 1720 aa12.96□□□□□ -0.34
PBX3-210ENST00000492314 HSPA6P17066 643 aa12.95□□□□□ -0.34
PBX3-210ENST00000492314 FBLN1P23142 703 aa12.95□□□□□ -0.34
PBX3-210ENST00000492314 MSL1Q68DK7 614 aa12.95□□□□□ -0.34
PBX3-210ENST00000492314 COG3Q96JB2 828 aa12.95□□□□□ -0.34
PBX3-210ENST00000492314 AMPHP49418 695 aa12.94□□□□□ -0.34
PBX3-210ENST00000492314 AMIGO3Q86WK7 504 aa12.94□□□□□ -0.34
PBX3-210ENST00000492314 GPBP1L1Q9HC44 474 aaPredicted RBP12.94□□□□□ -0.34
PBX3-210ENST00000492314 PALLDQ8WX93 1383 aa12.94□□□□□ -0.34
PBX3-210ENST00000492314 CICQ96RK0 1608 aaPredicted RBP12.93□□□□□ -0.34
PBX3-210ENST00000492314 C4BP0C0L5 1744 aa12.93□□□□□ -0.34
PBX3-210ENST00000492314 UBR3Q6ZT12 1888 aa12.93□□□□□ -0.34
PBX3-210ENST00000492314 NCAPD2Q15021 1401 aa12.92□□□□□ -0.34
PBX3-210ENST00000492314 MAP2P11137 1827 aaKnown RBP12.92□□□□□ -0.34
PBX3-210ENST00000492314 INSRP06213 1382 aa12.92□□□□□ -0.34
PBX3-210ENST00000492314 PCDH11XQ9BZA7 1347 aa12.91□□□□□ -0.34
PBX3-210ENST00000492314 PCDH11YQ9BZA8 1340 aa12.91□□□□□ -0.34
PBX3-210ENST00000492314 KIF3CO14782 793 aa12.91□□□□□ -0.34
PBX3-210ENST00000492314 FYB1O15117 783 aa12.91□□□□□ -0.34
PBX3-210ENST00000492314 CYP27B1O15528 508 aa12.91□□□□□ -0.34
PBX3-210ENST00000492314 RAPGEF4Q8WZA2 1011 aa12.91□□□□□ -0.34
PBX3-210ENST00000492314 KIF24Q5T7B8 1368 aa12.91□□□□□ -0.34
PBX3-210ENST00000492314 PITPNM1O00562 1244 aa12.9□□□□□ -0.34
PBX3-210ENST00000492314 RRS1Q15050 365 aaKnown RBP12.9□□□□□ -0.34
PBX3-210ENST00000492314 NKX1-1Q15270 411 aaPredicted RBP12.9□□□□□ -0.34
PBX3-210ENST00000492314 USHBP1Q8N6Y0 703 aa12.9□□□□□ -0.34
PBX3-210ENST00000492314 PCGF6Q9BYE7 350 aa12.9□□□□□ -0.34
PBX3-210ENST00000492314 SSUH2Q9Y2M2 353 aa12.9□□□□□ -0.34
PBX3-210ENST00000492314 PKD1L3Q7Z443 1732 aa12.9□□□□□ -0.34
PBX3-210ENST00000492314 ITGB4P16144 1822 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms