RNA–Protein interactions for RNA: ENST00000491439.1

SNAP47-211, Transcript of synaptosome associated protein 47, humanhuman

TSL 3

Gene SNAP47, Length 734 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-211ENST00000491439 SMG6Q86US8 1419 aaKnown RBP14.04□□□□□ -0.16
SNAP47-211ENST00000491439 HSP90AB2PQ58FF8 381 aa14.03□□□□□ -0.16
SNAP47-211ENST00000491439 USHBP1Q8N6Y0 703 aa14.03□□□□□ -0.16
SNAP47-211ENST00000491439 MTFR1LQ9H019 292 aa14.03□□□□□ -0.16
SNAP47-211ENST00000491439 CGNL1Q0VF96 1302 aa14.03□□□□□ -0.16
SNAP47-211ENST00000491439 SHANK3Q9BYB0 1731 aa14.03□□□□□ -0.16
SNAP47-211ENST00000491439 PRIM1P49642 420 aaKnown RBP14.02□□□□□ -0.17
SNAP47-211ENST00000491439 SLC27A3Q5K4L6 730 aa14.02□□□□□ -0.17
SNAP47-211ENST00000491439 AKT1S1Q96B36 256 aa14.02□□□□□ -0.17
SNAP47-211ENST00000491439 ATF5Q9Y2D1 282 aaPredicted RBP14.02□□□□□ -0.17
SNAP47-211ENST00000491439 KIF20BQ96Q89 1820 aa14.01□□□□□ -0.17
SNAP47-211ENST00000491439 NCAPD2Q15021 1401 aa14.01□□□□□ -0.17
SNAP47-211ENST00000491439 PCGF6Q9BYE7 350 aa14.01□□□□□ -0.17
SNAP47-211ENST00000491439 RAPGEF4Q8WZA2 1011 aa14□□□□□ -0.17
SNAP47-211ENST00000491439 EMILIN1Q9Y6C2 1016 aa14□□□□□ -0.17
SNAP47-211ENST00000491439 RGPD2P0DJD1 1756 aa14□□□□□ -0.17
SNAP47-211ENST00000491439 DOT1LQ8TEK3 1739 aa14□□□□□ -0.17
SNAP47-211ENST00000491439 SYTL4Q96C24 671 aaPredicted RBP13.99□□□□□ -0.17
SNAP47-211ENST00000491439 TATP17735 454 aaPredicted RBP13.98□□□□□ -0.17
SNAP47-211ENST00000491439 ANKRD26Q9UPS8 1709 aa13.98□□□□□ -0.17
SNAP47-211ENST00000491439 PNPLA7Q6ZV29 1317 aa13.97□□□□□ -0.17
SNAP47-211ENST00000491439 PCDH11XQ9BZA7 1347 aa13.97□□□□□ -0.17
SNAP47-211ENST00000491439 PCDH11YQ9BZA8 1340 aa13.97□□□□□ -0.17
SNAP47-211ENST00000491439 FHDC1Q9C0D6 1143 aaPredicted RBP13.97□□□□□ -0.17
SNAP47-211ENST00000491439 MAP3K5Q99683 1374 aa13.96□□□□□ -0.17
SNAP47-211ENST00000491439 WASHC2AQ641Q2 1341 aa13.96□□□□□ -0.17
SNAP47-211ENST00000491439 CYP27B1O15528 508 aa13.96□□□□□ -0.17
SNAP47-211ENST00000491439 KCNQ4P56696 695 aa13.96□□□□□ -0.17
SNAP47-211ENST00000491439 SYT17Q9BSW7 474 aa13.96□□□□□ -0.17
SNAP47-211ENST00000491439 LY75O60449 1722 aa13.95□□□□□ -0.18
SNAP47-211ENST00000491439 YY1P25490 414 aa13.95□□□□□ -0.18
SNAP47-211ENST00000491439 SLC16A10Q8TF71 515 aa13.95□□□□□ -0.18
SNAP47-211ENST00000491439 ARXQ96QS3 562 aa13.95□□□□□ -0.18
SNAP47-211ENST00000491439 QSER1Q2KHR3 1735 aa13.95□□□□□ -0.18
SNAP47-211ENST00000491439 HSPA5P11021 654 aaKnown RBP13.94□□□□□ -0.18
SNAP47-211ENST00000491439 POLKQ9UBT6 870 aa13.94□□□□□ -0.18
SNAP47-211ENST00000491439 CCNL1Q9UK58 526 aaPredicted RBP13.94□□□□□ -0.18
SNAP47-211ENST00000491439 PKD1L3Q7Z443 1732 aa13.93□□□□□ -0.18
SNAP47-211ENST00000491439 DCAF8L1A6NGE4 600 aa13.93□□□□□ -0.18
SNAP47-211ENST00000491439 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
SNAP47-211ENST00000491439 TFCP2L1Q9NZI6 479 aa13.93□□□□□ -0.18
SNAP47-211ENST00000491439 PPM1GO15355 546 aaPredicted RBP13.92□□□□□ -0.18
SNAP47-211ENST00000491439 NKX1-1Q15270 411 aaPredicted RBP13.92□□□□□ -0.18
SNAP47-211ENST00000491439 EYA1Q99502 592 aa13.92□□□□□ -0.18
SNAP47-211ENST00000491439 COL24A1Q17RW2 1714 aa13.92□□□□□ -0.18
SNAP47-211ENST00000491439 TOGARAM1Q9Y4F4 1720 aa13.91□□□□□ -0.18
SNAP47-211ENST00000491439 PALLDQ8WX93 1383 aa13.91□□□□□ -0.18
SNAP47-211ENST00000491439 UTRNP46939 3433 aa13.91□□□□□ -0.18
SNAP47-211ENST00000491439 POLR3GLQ9BT43 218 aa13.9□□□□□ -0.18
SNAP47-211ENST00000491439 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.9□□□□□ -0.18
SNAP47-211ENST00000491439 PLEKHG2Q9H7P9 1386 aa13.9□□□□□ -0.18
SNAP47-211ENST00000491439 TUBGCP6Q96RT7 1819 aa13.9□□□□□ -0.18
SNAP47-211ENST00000491439 EIF4A2Q14240 407 aaKnown RBP13.89□□□□□ -0.19
SNAP47-211ENST00000491439 MPRIPQ6WCQ1 1025 aa13.89□□□□□ -0.19
SNAP47-211ENST00000491439 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
SNAP47-211ENST00000491439 SPG7Q9UQ90 795 aa13.89□□□□□ -0.19
SNAP47-211ENST00000491439 POLD1P28340 1107 aa13.88□□□□□ -0.19
SNAP47-211ENST00000491439 COL23A1Q86Y22 540 aaPredicted RBP13.88□□□□□ -0.19
SNAP47-211ENST00000491439 PIGBQ92521 554 aa13.88□□□□□ -0.19
SNAP47-211ENST00000491439 PANK3Q9H999 370 aa13.88□□□□□ -0.19
SNAP47-211ENST00000491439 TNNT2P45379 298 aaPredicted RBP13.87□□□□□ -0.19
SNAP47-211ENST00000491439 SMARCC1Q92922 1105 aaPredicted RBP13.87□□□□□ -0.19
SNAP47-211ENST00000491439 IGSF1Q8N6C5 1336 aa13.87□□□□□ -0.19
SNAP47-211ENST00000491439 C5P01031 1676 aa13.86□□□□□ -0.19
SNAP47-211ENST00000491439 PHKG2P15735 406 aa13.86□□□□□ -0.19
SNAP47-211ENST00000491439 HMGB2P26583 209 aaKnown RBP13.85□□□□□ -0.19
SNAP47-211ENST00000491439 AMIGO3Q86WK7 504 aa13.84□□□□□ -0.19
SNAP47-211ENST00000491439 IFNL2Q8IZJ0 200 aa13.84□□□□□ -0.19
SNAP47-211ENST00000491439 KAT6BQ8WYB5 2073 aa13.83□□□□□ -0.2
SNAP47-211ENST00000491439 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
SNAP47-211ENST00000491439 NLGN2Q8NFZ4 835 aa13.83□□□□□ -0.2
SNAP47-211ENST00000491439 C4BP0C0L5 1744 aa13.83□□□□□ -0.2
SNAP47-211ENST00000491439 MAP2P11137 1827 aaKnown RBP13.83□□□□□ -0.2
SNAP47-211ENST00000491439 LOC102724428A0A0B4J2F2 783 aa13.82□□□□□ -0.2
SNAP47-211ENST00000491439 MSH5O43196 834 aa13.82□□□□□ -0.2
SNAP47-211ENST00000491439 SIK1P57059 783 aa13.82□□□□□ -0.2
SNAP47-211ENST00000491439 MSL1Q68DK7 614 aa13.82□□□□□ -0.2
SNAP47-211ENST00000491439 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
SNAP47-211ENST00000491439 ITGB4P16144 1822 aa13.81□□□□□ -0.2
SNAP47-211ENST00000491439 MORC1Q86VD1 984 aa13.81□□□□□ -0.2
SNAP47-211ENST00000491439 KLHL34Q8N239 644 aa13.81□□□□□ -0.2
SNAP47-211ENST00000491439 ZNF784Q8NCA9 323 aaPredicted RBP13.81□□□□□ -0.2
SNAP47-211ENST00000491439 LINC00116Q8NCU8 138 aa13.81□□□□□ -0.2
SNAP47-211ENST00000491439 AK7Q96M32 723 aa13.81□□□□□ -0.2
SNAP47-211ENST00000491439 ASAP1Q9ULH1 1129 aa13.81□□□□□ -0.2
SNAP47-211ENST00000491439 KDRP35968 1356 aa13.81□□□□□ -0.2
SNAP47-211ENST00000491439 GOLGB1Q14789 3259 aaKnown RBP13.81□□□□□ -0.2
SNAP47-211ENST00000491439 TAF1LQ8IZX4 1826 aa13.8□□□□□ -0.2
SNAP47-211ENST00000491439 ITPK1Q13572 414 aa13.8□□□□□ -0.2
SNAP47-211ENST00000491439 GPR162Q16538 588 aa13.8□□□□□ -0.2
SNAP47-211ENST00000491439 AMER1Q5JTC6 1135 aaPredicted RBP13.8□□□□□ -0.2
SNAP47-211ENST00000491439 ATG3Q9NT62 314 aa13.8□□□□□ -0.2
SNAP47-211ENST00000491439 KIF7Q2M1P5 1343 aa13.8□□□□□ -0.2
SNAP47-211ENST00000491439 KDM6AO15550 1401 aaPredicted RBP13.8□□□□□ -0.2
SNAP47-211ENST00000491439 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.79□□□□□ -0.2
SNAP47-211ENST00000491439 SSFA2P28290 1259 aa13.79□□□□□ -0.2
SNAP47-211ENST00000491439 AEBP1Q8IUX7 1158 aa13.79□□□□□ -0.2
SNAP47-211ENST00000491439 KNSTRNQ9Y448 316 aa13.79□□□□□ -0.2
SNAP47-211ENST00000491439 ERVV-2B6SEH9 535 aa13.78□□□□□ -0.2
SNAP47-211ENST00000491439 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms