RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 ACSBG1Q96GR2 724 aa16.01■□□□□ 0.15
CLCNKA-206ENST00000491433 NMRK2Q9NPI5 230 aa16.01■□□□□ 0.15
CLCNKA-206ENST00000491433 AKT1S1Q96B36 256 aa16■□□□□ 0.15
CLCNKA-206ENST00000491433 TFCP2L1Q9NZI6 479 aa16■□□□□ 0.15
CLCNKA-206ENST00000491433 NLRP2Q9NX02 1062 aa15.99■□□□□ 0.15
CLCNKA-206ENST00000491433 KTN1Q86UP2 1357 aaKnown RBP15.99■□□□□ 0.15
CLCNKA-206ENST00000491433 ERBB3P21860 1342 aa15.98■□□□□ 0.15
CLCNKA-206ENST00000491433 USP54Q70EL1 1684 aa15.96■□□□□ 0.15
CLCNKA-206ENST00000491433 LRRC4BQ9NT99 713 aa15.96■□□□□ 0.15
CLCNKA-206ENST00000491433 LTN1O94822 1766 aa15.95■□□□□ 0.14
CLCNKA-206ENST00000491433 MON2Q7Z3U7 1717 aa15.95■□□□□ 0.14
CLCNKA-206ENST00000491433 HMGB2P26583 209 aaKnown RBP15.95■□□□□ 0.14
CLCNKA-206ENST00000491433 PRDM10Q9NQV6 1147 aa15.95■□□□□ 0.14
CLCNKA-206ENST00000491433 USP31Q70CQ4 1352 aa15.95■□□□□ 0.14
CLCNKA-206ENST00000491433 FAM208AQ9UK61 1670 aaKnown RBP15.92■□□□□ 0.14
CLCNKA-206ENST00000491433 MSH5O43196 834 aa15.92■□□□□ 0.14
CLCNKA-206ENST00000491433 ANKRD24Q8TF21 1146 aa15.92■□□□□ 0.14
CLCNKA-206ENST00000491433 SMC1BQ8NDV3 1235 aa15.91■□□□□ 0.14
CLCNKA-206ENST00000491433 ABHD8Q96I13 439 aa15.91■□□□□ 0.14
CLCNKA-206ENST00000491433 IGSF1Q8N6C5 1336 aa15.91■□□□□ 0.14
CLCNKA-206ENST00000491433 ROCK2O75116 1388 aaKnown RBP15.9■□□□□ 0.14
CLCNKA-206ENST00000491433 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.9■□□□□ 0.14
CLCNKA-206ENST00000491433 RGS19P49795 217 aa15.89■□□□□ 0.13
CLCNKA-206ENST00000491433 HDGFL2Q7Z4V5 671 aaPredicted RBP15.89■□□□□ 0.13
CLCNKA-206ENST00000491433 DDX54Q8TDD1 881 aaKnown RBP15.89■□□□□ 0.13
CLCNKA-206ENST00000491433 TUBGCP6Q96RT7 1819 aa15.89■□□□□ 0.13
CLCNKA-206ENST00000491433 LY75O60449 1722 aa15.88■□□□□ 0.13
CLCNKA-206ENST00000491433 MSL1Q68DK7 614 aa15.88■□□□□ 0.13
CLCNKA-206ENST00000491433 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
CLCNKA-206ENST00000491433 L3MBTL2Q969R5 705 aa15.87■□□□□ 0.13
CLCNKA-206ENST00000491433 SYTL4Q96C24 671 aaPredicted RBP15.87■□□□□ 0.13
CLCNKA-206ENST00000491433 SBNO2Q9Y2G9 1366 aa15.87■□□□□ 0.13
CLCNKA-206ENST00000491433 CICQ96RK0 1608 aaPredicted RBP15.86■□□□□ 0.13
CLCNKA-206ENST00000491433 FOXN1O15353 648 aa15.86■□□□□ 0.13
CLCNKA-206ENST00000491433 EDC4Q6P2E9 1401 aaKnown RBP15.85■□□□□ 0.13
CLCNKA-206ENST00000491433 NME9Q86XW9 330 aa15.85■□□□□ 0.13
CLCNKA-206ENST00000491433 IP6K1Q92551 441 aa15.85■□□□□ 0.13
CLCNKA-206ENST00000491433 TERF2IPQ9NYB0 399 aa15.85■□□□□ 0.13
CLCNKA-206ENST00000491433 KDM2BQ8NHM5 1336 aa15.85■□□□□ 0.13
CLCNKA-206ENST00000491433 DOT1LQ8TEK3 1739 aa15.85■□□□□ 0.13
CLCNKA-206ENST00000491433 C10orf71Q711Q0 1435 aa15.85■□□□□ 0.13
CLCNKA-206ENST00000491433 PRIM1P49642 420 aaKnown RBP15.84■□□□□ 0.13
CLCNKA-206ENST00000491433 CTCFP49711 727 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-206ENST00000491433 FLAD1Q8NFF5 587 aa15.84■□□□□ 0.13
CLCNKA-206ENST00000491433 CCNL1Q9UK58 526 aaPredicted RBP15.84■□□□□ 0.13
CLCNKA-206ENST00000491433 TMC1Q8TDI8 760 aa15.83■□□□□ 0.12
CLCNKA-206ENST00000491433 AIDAQ96BJ3 306 aa15.83■□□□□ 0.12
CLCNKA-206ENST00000491433 USP47Q96K76 1375 aa15.83■□□□□ 0.12
CLCNKA-206ENST00000491433 PLEKHG2Q9H7P9 1386 aa15.83■□□□□ 0.12
CLCNKA-206ENST00000491433 COL23A1Q86Y22 540 aaPredicted RBP15.82■□□□□ 0.12
CLCNKA-206ENST00000491433 ZCRB1Q8TBF4 217 aaKnown RBP15.82■□□□□ 0.12
CLCNKA-206ENST00000491433 CCDC85CA6NKD9 419 aa15.81■□□□□ 0.12
CLCNKA-206ENST00000491433 CD163L1Q9NR16 1453 aa15.81■□□□□ 0.12
CLCNKA-206ENST00000491433 CGNL1Q0VF96 1302 aa15.8■□□□□ 0.12
CLCNKA-206ENST00000491433 LTV1Q96GA3 475 aaPredicted RBP15.8■□□□□ 0.12
CLCNKA-206ENST00000491433 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
CLCNKA-206ENST00000491433 NSD2O96028 1365 aa15.79■□□□□ 0.12
CLCNKA-206ENST00000491433 KCNQ4P56696 695 aa15.79■□□□□ 0.12
CLCNKA-206ENST00000491433 AMPHP49418 695 aa15.78■□□□□ 0.12
CLCNKA-206ENST00000491433 RRAGCQ9HB90 399 aa15.78■□□□□ 0.12
CLCNKA-206ENST00000491433 C5P01031 1676 aa15.78■□□□□ 0.12
CLCNKA-206ENST00000491433 PXDNLA1KZ92 1463 aa15.78■□□□□ 0.12
CLCNKA-206ENST00000491433 ARHGAP27Q6ZUM4 889 aa15.77■□□□□ 0.12
CLCNKA-206ENST00000491433 COG3Q96JB2 828 aa15.77■□□□□ 0.12
CLCNKA-206ENST00000491433 SLC12A5Q9H2X9 1139 aa15.77■□□□□ 0.12
CLCNKA-206ENST00000491433 KCPQ6ZWJ8 1503 aa15.76■□□□□ 0.11
CLCNKA-206ENST00000491433 NSD3Q9BZ95 1437 aa15.76■□□□□ 0.11
CLCNKA-206ENST00000491433 A0A1W2PP64 1363 aa15.75■□□□□ 0.11
CLCNKA-206ENST00000491433 SLC24A1O60721 1099 aa15.75■□□□□ 0.11
CLCNKA-206ENST00000491433 HOXC9P31274 260 aa15.75■□□□□ 0.11
CLCNKA-206ENST00000491433 C9orf131Q5VYM1 1079 aa15.75■□□□□ 0.11
CLCNKA-206ENST00000491433 CARD11Q9BXL7 1154 aa15.75■□□□□ 0.11
CLCNKA-206ENST00000491433 SMG6Q86US8 1419 aaKnown RBP15.75■□□□□ 0.11
CLCNKA-206ENST00000491433 RTL1A6NKG5 1358 aa15.75■□□□□ 0.11
CLCNKA-206ENST00000491433 PDE4DIPQ5VU43 2346 aa15.74■□□□□ 0.11
CLCNKA-206ENST00000491433 TAF1LQ8IZX4 1826 aa15.74■□□□□ 0.11
CLCNKA-206ENST00000491433 LBX1P52954 281 aa15.74■□□□□ 0.11
CLCNKA-206ENST00000491433 RAPGEF4Q8WZA2 1011 aa15.74■□□□□ 0.11
CLCNKA-206ENST00000491433 RGPD2P0DJD1 1756 aa15.74■□□□□ 0.11
CLCNKA-206ENST00000491433 MAP3K19Q56UN5 1328 aa15.73■□□□□ 0.11
CLCNKA-206ENST00000491433 MKRN1Q9UHC7 482 aaKnown RBP15.73■□□□□ 0.11
CLCNKA-206ENST00000491433 BCS1LQ9Y276 419 aa15.73■□□□□ 0.11
CLCNKA-206ENST00000491433 MEGF6O75095 1541 aa15.73■□□□□ 0.11
CLCNKA-206ENST00000491433 TATP17735 454 aaPredicted RBP15.72■□□□□ 0.11
CLCNKA-206ENST00000491433 SMARCC1Q92922 1105 aaPredicted RBP15.72■□□□□ 0.11
CLCNKA-206ENST00000491433 PCDH11XQ9BZA7 1347 aa15.71■□□□□ 0.11
CLCNKA-206ENST00000491433 PCDH11YQ9BZA8 1340 aa15.71■□□□□ 0.11
CLCNKA-206ENST00000491433 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
CLCNKA-206ENST00000491433 AK7Q96M32 723 aa15.71■□□□□ 0.11
CLCNKA-206ENST00000491433 PALLDQ8WX93 1383 aa15.71■□□□□ 0.11
CLCNKA-206ENST00000491433 TNRC6CQ9HCJ0 1690 aaKnown RBP15.7■□□□□ 0.1
CLCNKA-206ENST00000491433 SIN3AQ96ST3 1273 aa15.7■□□□□ 0.1
CLCNKA-206ENST00000491433 CREBZFQ9NS37 354 aa15.7■□□□□ 0.1
CLCNKA-206ENST00000491433 C4BP0C0L5 1744 aa15.69■□□□□ 0.1
CLCNKA-206ENST00000491433 CFAP44Q96MT7 982 aa15.69■□□□□ 0.1
CLCNKA-206ENST00000491433 SSFA2P28290 1259 aa15.67■□□□□ 0.1
CLCNKA-206ENST00000491433 NBPF6Q5VWK0 638 aa15.67■□□□□ 0.1
CLCNKA-206ENST00000491433 MPRIPQ6WCQ1 1025 aa15.67■□□□□ 0.1
CLCNKA-206ENST00000491433 NBPF4Q96M43 638 aa15.67■□□□□ 0.1
CLCNKA-206ENST00000491433 UBR3Q6ZT12 1888 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms