RNA–Protein interactions for RNA: ENST00000491395.5

APP-216, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-216ENST00000491395 RGPD4Q7Z3J3 1758 aa11.49□□□□□ -0.57
APP-216ENST00000491395 PPM1GO15355 546 aaPredicted RBP11.48□□□□□ -0.57
APP-216ENST00000491395 HSPA5P11021 654 aaKnown RBP11.48□□□□□ -0.57
APP-216ENST00000491395 CCER1Q8TC90 406 aaPredicted RBP11.48□□□□□ -0.57
APP-216ENST00000491395 AKT1S1Q96B36 256 aa11.48□□□□□ -0.57
APP-216ENST00000491395 MTFR1LQ9H019 292 aa11.48□□□□□ -0.57
APP-216ENST00000491395 FLT4P35916 1363 aa11.48□□□□□ -0.57
APP-216ENST00000491395 NHSQ6T4R5 1651 aa11.47□□□□□ -0.57
APP-216ENST00000491395 SMG6Q86US8 1419 aaKnown RBP11.47□□□□□ -0.57
APP-216ENST00000491395 CGNL1Q0VF96 1302 aa11.47□□□□□ -0.57
APP-216ENST00000491395 SLC27A3Q5K4L6 730 aa11.47□□□□□ -0.57
APP-216ENST00000491395 NSD2O96028 1365 aa11.46□□□□□ -0.57
APP-216ENST00000491395 KIF24Q5T7B8 1368 aa11.46□□□□□ -0.57
APP-216ENST00000491395 EIF4G2P78344 907 aaKnown RBP eCLIP11.46□□□□□ -0.57
APP-216ENST00000491395 SGIP1Q9BQI5 828 aa11.46□□□□□ -0.57
APP-216ENST00000491395 DCAF8L1A6NGE4 600 aa11.45□□□□□ -0.58
APP-216ENST00000491395 CYP27B1O15528 508 aa11.45□□□□□ -0.58
APP-216ENST00000491395 TNNT2P45379 298 aaPredicted RBP11.45□□□□□ -0.58
APP-216ENST00000491395 FHDC1Q9C0D6 1143 aaPredicted RBP11.45□□□□□ -0.58
APP-216ENST00000491395 POLKQ9UBT6 870 aa11.45□□□□□ -0.58
APP-216ENST00000491395 CCNL1Q9UK58 526 aaPredicted RBP11.45□□□□□ -0.58
APP-216ENST00000491395 FAM208AQ9UK61 1670 aaKnown RBP11.45□□□□□ -0.58
APP-216ENST00000491395 CASZ1Q86V15 1759 aa11.44□□□□□ -0.58
APP-216ENST00000491395 WASHC2AQ641Q2 1341 aa11.44□□□□□ -0.58
APP-216ENST00000491395 PNPLA7Q6ZV29 1317 aa11.44□□□□□ -0.58
APP-216ENST00000491395 ARXQ96QS3 562 aa11.44□□□□□ -0.58
APP-216ENST00000491395 SYT17Q9BSW7 474 aa11.44□□□□□ -0.58
APP-216ENST00000491395 PANK3Q9H999 370 aa11.44□□□□□ -0.58
APP-216ENST00000491395 TFCP2L1Q9NZI6 479 aa11.44□□□□□ -0.58
APP-216ENST00000491395 PCDH11XQ9BZA7 1347 aa11.43□□□□□ -0.58
APP-216ENST00000491395 PCDH11YQ9BZA8 1340 aa11.43□□□□□ -0.58
APP-216ENST00000491395 YY1P25490 414 aa11.43□□□□□ -0.58
APP-216ENST00000491395 MPRIPQ6WCQ1 1025 aa11.43□□□□□ -0.58
APP-216ENST00000491395 EYA1Q99502 592 aa11.43□□□□□ -0.58
APP-216ENST00000491395 BTAF1O14981 1849 aa11.43□□□□□ -0.58
APP-216ENST00000491395 KAT6BQ8WYB5 2073 aa11.43□□□□□ -0.58
APP-216ENST00000491395 PAPPAQ13219 1627 aa11.42□□□□□ -0.58
APP-216ENST00000491395 RGPD2P0DJD1 1756 aa11.41□□□□□ -0.58
APP-216ENST00000491395 EIF4A2Q14240 407 aaKnown RBP11.41□□□□□ -0.58
APP-216ENST00000491395 SLC16A10Q8TF71 515 aa11.41□□□□□ -0.58
APP-216ENST00000491395 SPG7Q9UQ90 795 aa11.41□□□□□ -0.58
APP-216ENST00000491395 MYOM1P52179 1685 aa11.4□□□□□ -0.58
APP-216ENST00000491395 NKX1-1Q15270 411 aaPredicted RBP11.4□□□□□ -0.58
APP-216ENST00000491395 PIGBQ92521 554 aa11.4□□□□□ -0.58
APP-216ENST00000491395 MSH5O43196 834 aa11.39□□□□□ -0.59
APP-216ENST00000491395 POLD1P28340 1107 aa11.39□□□□□ -0.59
APP-216ENST00000491395 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
APP-216ENST00000491395 PALLDQ8WX93 1383 aa11.39□□□□□ -0.59
APP-216ENST00000491395 NCAPD2Q15021 1401 aa11.38□□□□□ -0.59
APP-216ENST00000491395 KIF20BQ96Q89 1820 aa11.38□□□□□ -0.59
APP-216ENST00000491395 MORC1Q86VD1 984 aa11.38□□□□□ -0.59
APP-216ENST00000491395 KLHL34Q8N239 644 aa11.38□□□□□ -0.59
APP-216ENST00000491395 SMARCC1Q92922 1105 aaPredicted RBP11.38□□□□□ -0.59
APP-216ENST00000491395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.596e-14■■□□□ 13.5
APP-216ENST00000491395 SHANK3Q9BYB0 1731 aa11.38□□□□□ -0.59
APP-216ENST00000491395 PHKG2P15735 406 aa11.37□□□□□ -0.59
APP-216ENST00000491395 DOT1LQ8TEK3 1739 aa11.37□□□□□ -0.59
APP-216ENST00000491395 MSL1Q68DK7 614 aa11.36□□□□□ -0.59
APP-216ENST00000491395 SMIM5Q71RC9 77 aa11.36□□□□□ -0.59
APP-216ENST00000491395 IFNL2Q8IZJ0 200 aa11.36□□□□□ -0.59
APP-216ENST00000491395 KNSTRNQ9Y448 316 aa11.36□□□□□ -0.59
APP-216ENST00000491395 MAP3K5Q99683 1374 aa11.36□□□□□ -0.59
APP-216ENST00000491395 AMIGO3Q86WK7 504 aa11.35□□□□□ -0.59
APP-216ENST00000491395 TMOD3Q9NYL9 352 aa11.35□□□□□ -0.59
APP-216ENST00000491395 ASAP1Q9ULH1 1129 aa11.35□□□□□ -0.59
APP-216ENST00000491395 IGSF1Q8N6C5 1336 aa11.35□□□□□ -0.59
APP-216ENST00000491395 LOC102724428A0A0B4J2F2 783 aa11.34□□□□□ -0.59
APP-216ENST00000491395 SIK1P57059 783 aa11.34□□□□□ -0.59
APP-216ENST00000491395 GPR162Q16538 588 aa11.34□□□□□ -0.59
APP-216ENST00000491395 AEBP1Q8IUX7 1158 aa11.34□□□□□ -0.59
APP-216ENST00000491395 NLGN2Q8NFZ4 835 aa11.34□□□□□ -0.59
APP-216ENST00000491395 KIF7Q2M1P5 1343 aa11.34□□□□□ -0.59
APP-216ENST00000491395 HMGB2P26583 209 aaKnown RBP11.33□□□□□ -0.6
APP-216ENST00000491395 ITPK1Q13572 414 aa11.33□□□□□ -0.6
APP-216ENST00000491395 PLEKHO1Q53GL0 409 aaPredicted RBP11.33□□□□□ -0.6
APP-216ENST00000491395 PELP1Q8IZL8 1130 aaKnown RBP11.33□□□□□ -0.6
APP-216ENST00000491395 LINC00116Q8NCU8 138 aa11.33□□□□□ -0.6
APP-216ENST00000491395 FLAD1Q8NFF5 587 aa11.33□□□□□ -0.6
APP-216ENST00000491395 AK7Q96M32 723 aa11.33□□□□□ -0.6
APP-216ENST00000491395 ATG3Q9NT62 314 aa11.33□□□□□ -0.6
APP-216ENST00000491395 PHF14O94880 888 aa11.32□□□□□ -0.6
APP-216ENST00000491395 ATP6V1AP38606 617 aa11.32□□□□□ -0.6
APP-216ENST00000491395 AMER1Q5JTC6 1135 aaPredicted RBP11.32□□□□□ -0.6
APP-216ENST00000491395 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
APP-216ENST00000491395 LY75O60449 1722 aa11.32□□□□□ -0.6
APP-216ENST00000491395 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.31□□□□□ -0.6
APP-216ENST00000491395 ERVV-2B6SEH9 535 aa11.31□□□□□ -0.6
APP-216ENST00000491395 IL13P35225 146 aa11.31□□□□□ -0.6
APP-216ENST00000491395 SULT6B1Q6IMI4 303 aa11.31□□□□□ -0.6
APP-216ENST00000491395 ZNF784Q8NCA9 323 aaPredicted RBP11.31□□□□□ -0.6
APP-216ENST00000491395 DCAF5Q96JK2 942 aa11.31□□□□□ -0.6
APP-216ENST00000491395 ANKRD26Q9UPS8 1709 aa11.3□□□□□ -0.6
APP-216ENST00000491395 HSP90AB1P08238 724 aaKnown RBP11.3□□□□□ -0.6
APP-216ENST00000491395 AMOTQ4VCS5 1084 aa11.3□□□□□ -0.6
APP-216ENST00000491395 SLC4A9Q96Q91 983 aa11.3□□□□□ -0.6
APP-216ENST00000491395 MAP2P11137 1827 aaKnown RBP11.3□□□□□ -0.6
APP-216ENST00000491395 PKD1L3Q7Z443 1732 aa11.29□□□□□ -0.6
APP-216ENST00000491395 TOGARAM1Q9Y4F4 1720 aa11.29□□□□□ -0.6
APP-216ENST00000491395 GNPATO15228 680 aa11.29□□□□□ -0.6
APP-216ENST00000491395 PER1O15534 1290 aaPredicted RBP11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms