RNA–Protein interactions for RNA: ENST00000491332.1

NCSTN-213, Transcript of nicastrin, humanhuman

TSL 3

Gene NCSTN, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-213ENST00000491332 PCDHGA11Q9Y5H2 935 aa10.13□□□□□ -0.79
NCSTN-213ENST00000491332 DPYDQ12882 1025 aa10.12□□□□□ -0.79
NCSTN-213ENST00000491332 SIX5Q8N196 739 aa10.12□□□□□ -0.79
NCSTN-213ENST00000491332 LARGE2Q8N3Y3 721 aa10.12□□□□□ -0.79
NCSTN-213ENST00000491332 TMPRSS4Q9NRS4 437 aa10.12□□□□□ -0.79
NCSTN-213ENST00000491332 ERVK-9P63128 1117 aa10.11□□□□□ -0.79
NCSTN-213ENST00000491332 AEBP1Q8IUX7 1158 aa10.11□□□□□ -0.79
NCSTN-213ENST00000491332 FAM200AQ8TCP9 573 aa10.11□□□□□ -0.79
NCSTN-213ENST00000491332 PKD2L1Q9P0L9 805 aa10.11□□□□□ -0.79
NCSTN-213ENST00000491332 NR3C2P08235 984 aa10.1□□□□□ -0.79
NCSTN-213ENST00000491332 DHX9Q08211 1270 aaKnown RBP10.1□□□□□ -0.79
NCSTN-213ENST00000491332 FAM69CQ0P6D2 419 aa10.1□□□□□ -0.79
NCSTN-213ENST00000491332 NR5A1Q13285 461 aa10.1□□□□□ -0.79
NCSTN-213ENST00000491332 PRKD2Q9BZL6 878 aa10.1□□□□□ -0.79
NCSTN-213ENST00000491332 V9GY48 417 aaPredicted RBP10.1□□□□□ -0.79
NCSTN-213ENST00000491332 ZBTB7CA1YPR0 619 aa10.09□□□□□ -0.79
NCSTN-213ENST00000491332 BRD1O95696 1058 aa10.09□□□□□ -0.79
NCSTN-213ENST00000491332 MYCP01106 439 aaPredicted RBP10.09□□□□□ -0.79
NCSTN-213ENST00000491332 CC2D2BQ6DHV5 1058 aa10.09□□□□□ -0.79
NCSTN-213ENST00000491332 CCDC116Q8IYX3 515 aa10.09□□□□□ -0.79
NCSTN-213ENST00000491332 ZNF784Q8NCA9 323 aaPredicted RBP10.09□□□□□ -0.79
NCSTN-213ENST00000491332 TPCN2Q8NHX9 752 aa10.09□□□□□ -0.79
NCSTN-213ENST00000491332 SLAIN2Q9P270 581 aa10.09□□□□□ -0.79
NCSTN-213ENST00000491332 FOXC1Q12948 553 aa10.08□□□□□ -0.8
NCSTN-213ENST00000491332 PPP1R26Q5T8A7 1209 aaPredicted RBP10.08□□□□□ -0.8
NCSTN-213ENST00000491332 CCDC102BQ68D86 513 aa10.08□□□□□ -0.8
NCSTN-213ENST00000491332 CYLDQ9NQC7 956 aa10.08□□□□□ -0.8
NCSTN-213ENST00000491332 PSME1Q06323 249 aa10.07□□□□□ -0.8
NCSTN-213ENST00000491332 OSBPL3Q9H4L5 887 aa10.07□□□□□ -0.8
NCSTN-213ENST00000491332 PODXL2Q9NZ53 605 aa10.07□□□□□ -0.8
NCSTN-213ENST00000491332 LILRA1O75019 489 aa10.06□□□□□ -0.8
NCSTN-213ENST00000491332 ALDH1A1P00352 501 aa10.06□□□□□ -0.8
NCSTN-213ENST00000491332 SFI1A8K8P3 1242 aa10.05□□□□□ -0.8
NCSTN-213ENST00000491332 GDF9O60383 454 aa10.05□□□□□ -0.8
NCSTN-213ENST00000491332 SEC13P55735 322 aa10.05□□□□□ -0.8
NCSTN-213ENST00000491332 SWI5Q1ZZU3 235 aa10.05□□□□□ -0.8
NCSTN-213ENST00000491332 CLP1Q92989 425 aaKnown RBP10.05□□□□□ -0.8
NCSTN-213ENST00000491332 KCNA1Q09470 495 aa10.04□□□□□ -0.8
NCSTN-213ENST00000491332 NNTQ13423 1086 aa10.04□□□□□ -0.8
NCSTN-213ENST00000491332 MYT1Q01538 1121 aa10.03□□□□□ -0.8
NCSTN-213ENST00000491332 PHLDB3Q6NSJ2 640 aa10.03□□□□□ -0.8
NCSTN-213ENST00000491332 SNIP1Q8TAD8 396 aaKnown RBP10.03□□□□□ -0.8
NCSTN-213ENST00000491332 TRIM52Q96A61 297 aa10.03□□□□□ -0.8
NCSTN-213ENST00000491332 RBM19Q9Y4C8 960 aaKnown RBP10.03□□□□□ -0.8
NCSTN-213ENST00000491332 EMILIN1Q9Y6C2 1016 aa10.03□□□□□ -0.8
NCSTN-213ENST00000491332 TMEM229AB2RXF0 380 aa10.02□□□□□ -0.81
NCSTN-213ENST00000491332 ADD1P35611 737 aaKnown RBP10.02□□□□□ -0.81
NCSTN-213ENST00000491332 SCNN1DP51172 638 aa10.02□□□□□ -0.81
NCSTN-213ENST00000491332 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.81
NCSTN-213ENST00000491332 ESF1Q9H501 851 aaKnown RBP10.02□□□□□ -0.81
NCSTN-213ENST00000491332 PGPEP1Q9NXJ5 209 aa10.02□□□□□ -0.81
NCSTN-213ENST00000491332 WASF2Q9Y6W5 498 aa10.02□□□□□ -0.81
NCSTN-213ENST00000491332 PATL2C9JE40 543 aaKnown RBP10.01□□□□□ -0.81
NCSTN-213ENST00000491332 J3QL48 77 aa10.01□□□□□ -0.81
NCSTN-213ENST00000491332 STAU1O95793 577 aaKnown RBP10.01□□□□□ -0.81
NCSTN-213ENST00000491332 SSFA2P28290 1259 aa10.01□□□□□ -0.81
NCSTN-213ENST00000491332 B4GALNT3Q6L9W6 998 aa10.01□□□□□ -0.81
NCSTN-213ENST00000491332 TRIM67Q6ZTA4 783 aa10.01□□□□□ -0.81
NCSTN-213ENST00000491332 ZNF358Q9NW07 568 aa10.01□□□□□ -0.81
NCSTN-213ENST00000491332 M0R2N6 131 aa10□□□□□ -0.81
NCSTN-213ENST00000491332 TNFRSF10AO00220 468 aa10□□□□□ -0.81
NCSTN-213ENST00000491332 CYP2U1Q7Z449 544 aa10□□□□□ -0.81
NCSTN-213ENST00000491332 TOR4AQ9NXH8 423 aa10□□□□□ -0.81
NCSTN-213ENST00000491332 WASLO00401 505 aaPredicted RBP9.99□□□□□ -0.81
NCSTN-213ENST00000491332 CYP4X1Q8N118 509 aa9.99□□□□□ -0.81
NCSTN-213ENST00000491332 TSEN2Q8NCE0 465 aaKnown RBP9.99□□□□□ -0.81
NCSTN-213ENST00000491332 KLF16Q9BXK1 252 aaPredicted RBP9.99□□□□□ -0.81
NCSTN-213ENST00000491332 ETNK1Q9HBU6 452 aa9.99□□□□□ -0.81
NCSTN-213ENST00000491332 TTC24A2A3L6 582 aaPredicted RBP9.98□□□□□ -0.81
NCSTN-213ENST00000491332 ATP2B4P23634 1241 aa9.98□□□□□ -0.81
NCSTN-213ENST00000491332 GDF10P55107 478 aa9.98□□□□□ -0.81
NCSTN-213ENST00000491332 LGR5O75473 907 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 SMPD1P17405 629 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 PRR20EP86478 221 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 PRR20CP86479 221 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 PRR20DP86480 221 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 PRR20BP86481 221 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 PRR20AP86496 221 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 OCLNQ16625 522 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 ITPKCQ96DU7 683 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 IVNS1ABPQ9Y6Y0 642 aa9.97□□□□□ -0.81
NCSTN-213ENST00000491332 PRMT3O60678 531 aa9.96□□□□□ -0.82
NCSTN-213ENST00000491332 GNRH1P01148 92 aa9.96□□□□□ -0.82
NCSTN-213ENST00000491332 INHAP05111 366 aa9.96□□□□□ -0.82
NCSTN-213ENST00000491332 CBLBQ13191 982 aa9.96□□□□□ -0.82
NCSTN-213ENST00000491332 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
NCSTN-213ENST00000491332 HINFPQ9BQA5 517 aa9.96□□□□□ -0.82
NCSTN-213ENST00000491332 CXXC1Q9P0U4 656 aaPredicted RBP9.96□□□□□ -0.82
NCSTN-213ENST00000491332 ZIC2O95409 532 aaPredicted RBP9.95□□□□□ -0.82
NCSTN-213ENST00000491332 ADH1AP07327 375 aa9.95□□□□□ -0.82
NCSTN-213ENST00000491332 TXNDC2Q86VQ3 553 aa9.95□□□□□ -0.82
NCSTN-213ENST00000491332 KDF1Q8NAX2 398 aaPredicted RBP9.95□□□□□ -0.82
NCSTN-213ENST00000491332 GZF1Q9H116 711 aaPredicted RBP9.95□□□□□ -0.82
NCSTN-213ENST00000491332 ZFAND3Q9H8U3 227 aa9.95□□□□□ -0.82
NCSTN-213ENST00000491332 ARHGEF10LQ9HCE6 1279 aa9.95□□□□□ -0.82
NCSTN-213ENST00000491332 GNEQ9Y223 722 aaKnown RBP9.95□□□□□ -0.82
NCSTN-213ENST00000491332 TIMP2P16035 220 aa9.94□□□□□ -0.82
NCSTN-213ENST00000491332 WDR4P57081 412 aaKnown RBP9.94□□□□□ -0.82
NCSTN-213ENST00000491332 Q6ZVU0 165 aa9.94□□□□□ -0.82
NCSTN-213ENST00000491332 C1orf216Q8TAB5 229 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms