RNA–Protein interactions for RNA: ENST00000491166.1

TMCO3-208, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 2

Gene TMCO3, Length 595 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-208ENST00000491166 SLC15A2Q16348 729 aa17.34■□□□□ 0.37
TMCO3-208ENST00000491166 NSD3Q9BZ95 1437 aa17.34■□□□□ 0.37
TMCO3-208ENST00000491166 GOLGB1Q14789 3259 aaKnown RBP17.33■□□□□ 0.37
TMCO3-208ENST00000491166 C11orf95C9JLR9 678 aaPredicted RBP17.33■□□□□ 0.36
TMCO3-208ENST00000491166 HSPA5P11021 654 aaKnown RBP17.33■□□□□ 0.36
TMCO3-208ENST00000491166 ACSBG1Q96GR2 724 aa17.33■□□□□ 0.36
TMCO3-208ENST00000491166 EIF4G2P78344 907 aaKnown RBP eCLIP17.31■□□□□ 0.36
TMCO3-208ENST00000491166 TXNRD1Q16881 649 aa17.31■□□□□ 0.36
TMCO3-208ENST00000491166 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
TMCO3-208ENST00000491166 BCL9O00512 1426 aa17.3■□□□□ 0.36
TMCO3-208ENST00000491166 DDX54Q8TDD1 881 aaKnown RBP17.29■□□□□ 0.36
TMCO3-208ENST00000491166 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
TMCO3-208ENST00000491166 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
TMCO3-208ENST00000491166 HSPA6P17066 643 aa17.28■□□□□ 0.36
TMCO3-208ENST00000491166 HSP90AB2PQ58FF8 381 aa17.28■□□□□ 0.36
TMCO3-208ENST00000491166 NBPF6Q5VWK0 638 aa17.27■□□□□ 0.36
TMCO3-208ENST00000491166 NBPF4Q96M43 638 aa17.27■□□□□ 0.36
TMCO3-208ENST00000491166 EMILIN1Q9Y6C2 1016 aa17.27■□□□□ 0.36
TMCO3-208ENST00000491166 RTL1A6NKG5 1358 aa17.27■□□□□ 0.35
TMCO3-208ENST00000491166 RGPD2P0DJD1 1756 aa17.26■□□□□ 0.35
TMCO3-208ENST00000491166 PPM1GO15355 546 aaPredicted RBP17.26■□□□□ 0.35
TMCO3-208ENST00000491166 CAPN15O75808 1086 aa17.26■□□□□ 0.35
TMCO3-208ENST00000491166 MEGF6O75095 1541 aa17.26■□□□□ 0.35
TMCO3-208ENST00000491166 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
TMCO3-208ENST00000491166 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
TMCO3-208ENST00000491166 CGNL1Q0VF96 1302 aa17.23■□□□□ 0.35
TMCO3-208ENST00000491166 TNNT2P45379 298 aaPredicted RBP17.23■□□□□ 0.35
TMCO3-208ENST00000491166 NLGN2Q8NFZ4 835 aa17.23■□□□□ 0.35
TMCO3-208ENST00000491166 INSRP06213 1382 aa17.23■□□□□ 0.35
TMCO3-208ENST00000491166 FLT4P35916 1363 aa17.23■□□□□ 0.35
TMCO3-208ENST00000491166 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
TMCO3-208ENST00000491166 SMG6Q86US8 1419 aaKnown RBP17.22■□□□□ 0.35
TMCO3-208ENST00000491166 ZNF526Q8TF50 670 aaPredicted RBP17.22■□□□□ 0.35
TMCO3-208ENST00000491166 PANK3Q9H999 370 aa17.22■□□□□ 0.35
TMCO3-208ENST00000491166 ZCRB1Q8TBF4 217 aaKnown RBP17.21■□□□□ 0.35
TMCO3-208ENST00000491166 SYTL4Q96C24 671 aaPredicted RBP17.21■□□□□ 0.35
TMCO3-208ENST00000491166 GPBP1L1Q9HC44 474 aaPredicted RBP17.21■□□□□ 0.35
TMCO3-208ENST00000491166 YBX3P16989 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
TMCO3-208ENST00000491166 PRIM1P49642 420 aaKnown RBP17.19■□□□□ 0.34
TMCO3-208ENST00000491166 RAPGEF4Q8WZA2 1011 aa17.19■□□□□ 0.34
TMCO3-208ENST00000491166 ZNF827Q17R98 1081 aa17.18■□□□□ 0.34
TMCO3-208ENST00000491166 POLKQ9UBT6 870 aa17.18■□□□□ 0.34
TMCO3-208ENST00000491166 KAT6BQ8WYB5 2073 aa17.17■□□□□ 0.34
TMCO3-208ENST00000491166 BTAF1O14981 1849 aa17.17■□□□□ 0.34
TMCO3-208ENST00000491166 TATP17735 454 aaPredicted RBP17.17■□□□□ 0.34
TMCO3-208ENST00000491166 KCNQ4P56696 695 aa17.17■□□□□ 0.34
TMCO3-208ENST00000491166 KIF24Q5T7B8 1368 aa17.16■□□□□ 0.34
TMCO3-208ENST00000491166 POLD1P28340 1107 aa17.16■□□□□ 0.34
TMCO3-208ENST00000491166 GRIN3BO60391 1043 aa17.15■□□□□ 0.34
TMCO3-208ENST00000491166 LRRC4BQ9NT99 713 aa17.15■□□□□ 0.34
TMCO3-208ENST00000491166 PAPPAQ13219 1627 aa17.14■□□□□ 0.33
TMCO3-208ENST00000491166 DOT1LQ8TEK3 1739 aa17.14■□□□□ 0.33
TMCO3-208ENST00000491166 WASHC2AQ641Q2 1341 aa17.14■□□□□ 0.33
TMCO3-208ENST00000491166 NSD2O96028 1365 aa17.14■□□□□ 0.33
TMCO3-208ENST00000491166 EYA1Q99502 592 aa17.13■□□□□ 0.33
TMCO3-208ENST00000491166 KIF7Q2M1P5 1343 aa17.12■□□□□ 0.33
TMCO3-208ENST00000491166 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
TMCO3-208ENST00000491166 CYP27B1O15528 508 aa17.11■□□□□ 0.33
TMCO3-208ENST00000491166 EIF4A2Q14240 407 aaKnown RBP17.11■□□□□ 0.33
TMCO3-208ENST00000491166 COL13A1Q5TAT6 717 aaPredicted RBP17.11■□□□□ 0.33
TMCO3-208ENST00000491166 MAP2P11137 1827 aaKnown RBP17.11■□□□□ 0.33
TMCO3-208ENST00000491166 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
TMCO3-208ENST00000491166 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
TMCO3-208ENST00000491166 MORC1Q86VD1 984 aa17.1■□□□□ 0.33
TMCO3-208ENST00000491166 KNSTRNQ9Y448 316 aa17.09■□□□□ 0.33
TMCO3-208ENST00000491166 NCAPD2Q15021 1401 aa17.08■□□□□ 0.32
TMCO3-208ENST00000491166 SLC27A3Q5K4L6 730 aa17.07■□□□□ 0.32
TMCO3-208ENST00000491166 MPRIPQ6WCQ1 1025 aa17.07■□□□□ 0.32
TMCO3-208ENST00000491166 SLC16A10Q8TF71 515 aa17.07■□□□□ 0.32
TMCO3-208ENST00000491166 ADCY9O60503 1353 aa17.06■□□□□ 0.32
TMCO3-208ENST00000491166 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
TMCO3-208ENST00000491166 APLP1P51693 650 aa17.06■□□□□ 0.32
TMCO3-208ENST00000491166 CNGB1Q14028 1251 aaPredicted RBP17.06■□□□□ 0.32
TMCO3-208ENST00000491166 AKT1S1Q96B36 256 aa17.06■□□□□ 0.32
TMCO3-208ENST00000491166 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
TMCO3-208ENST00000491166 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
TMCO3-208ENST00000491166 AMER1Q5JTC6 1135 aaPredicted RBP17.04■□□□□ 0.32
TMCO3-208ENST00000491166 TNS4Q8IZW8 715 aa17.04■□□□□ 0.32
TMCO3-208ENST00000491166 DNAJC5GQ8N7S2 189 aa17.04■□□□□ 0.32
TMCO3-208ENST00000491166 COL24A1Q17RW2 1714 aa17.04■□□□□ 0.32
TMCO3-208ENST00000491166 PKD1L3Q7Z443 1732 aa17.04■□□□□ 0.32
TMCO3-208ENST00000491166 KIF3CO14782 793 aa17.03■□□□□ 0.32
TMCO3-208ENST00000491166 TFCP2L1Q9NZI6 479 aa17.03■□□□□ 0.32
TMCO3-208ENST00000491166 TOGARAM1Q9Y4F4 1720 aa17.03■□□□□ 0.32
TMCO3-208ENST00000491166 PALLDQ8WX93 1383 aa17.02■□□□□ 0.32
TMCO3-208ENST00000491166 IGSF1Q8N6C5 1336 aa17.02■□□□□ 0.32
TMCO3-208ENST00000491166 CC2D1BQ5T0F9 858 aaKnown RBP17.02■□□□□ 0.32
TMCO3-208ENST00000491166 AEBP1Q8IUX7 1158 aa17.02■□□□□ 0.32
TMCO3-208ENST00000491166 WWC3Q9ULE0 1092 aa17.02■□□□□ 0.32
TMCO3-208ENST00000491166 TUBGCP6Q96RT7 1819 aa17.02■□□□□ 0.31
TMCO3-208ENST00000491166 LY75O60449 1722 aa17.01■□□□□ 0.31
TMCO3-208ENST00000491166 PHKG2P15735 406 aa17.01■□□□□ 0.31
TMCO3-208ENST00000491166 PRELPP51888 382 aa17.01■□□□□ 0.31
TMCO3-208ENST00000491166 PIGBQ92521 554 aa17.01■□□□□ 0.31
TMCO3-208ENST00000491166 MSH5O43196 834 aa17■□□□□ 0.31
TMCO3-208ENST00000491166 NKX1-1Q15270 411 aaPredicted RBP17■□□□□ 0.31
TMCO3-208ENST00000491166 QSER1Q2KHR3 1735 aa17■□□□□ 0.31
TMCO3-208ENST00000491166 MSL1Q68DK7 614 aa16.99■□□□□ 0.31
TMCO3-208ENST00000491166 IFNL2Q8IZJ0 200 aa16.99■□□□□ 0.31
TMCO3-208ENST00000491166 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms