RNA–Protein interactions for RNA: ENST00000491094.6

VPS72-205, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5

Gene VPS72, Length 4,267 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-205ENST00000491094 RBSNQ9H1K0 784 aa13.66□□□□□ -0.22
VPS72-205ENST00000491094 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
VPS72-205ENST00000491094 YEATS2Q9ULM3 1422 aa13.66□□□□□ -0.22
VPS72-205ENST00000491094 REC8O95072 547 aa13.66□□□□□ -0.22
VPS72-205ENST00000491094 ZNF853P0CG23 659 aa13.66□□□□□ -0.22
VPS72-205ENST00000491094 CCDC173Q0VFZ6 552 aa13.65□□□□□ -0.22
VPS72-205ENST00000491094 NSFL1CQ9UNZ2 370 aaKnown RBP13.65□□□□□ -0.22
VPS72-205ENST00000491094 PTMSP20962 102 aa13.65□□□□□ -0.22
VPS72-205ENST00000491094 RPAP2Q8IXW5 612 aaPredicted RBP13.65□□□□□ -0.22
VPS72-205ENST00000491094 FAM13BQ9NYF5 915 aa13.65□□□□□ -0.22
VPS72-205ENST00000491094 ERC2O15083 957 aa13.64□□□□□ -0.23
VPS72-205ENST00000491094 HMMRO75330 724 aa13.64□□□□□ -0.23
VPS72-205ENST00000491094 LMBRD1Q9NUN5 540 aa13.64□□□□□ -0.23
VPS72-205ENST00000491094 SETBP1Q9Y6X0 1596 aa13.64□□□□□ -0.23
VPS72-205ENST00000491094 FAM69CQ0P6D2 419 aa13.64□□□□□ -0.23
VPS72-205ENST00000491094 PNPLA6Q8IY17 1366 aa13.64□□□□□ -0.23
VPS72-205ENST00000491094 ISY1Q9ULR0 285 aaKnown RBP13.64□□□□□ -0.23
VPS72-205ENST00000491094 ZSCAN30Q86W11 494 aa13.63□□□□□ -0.23
VPS72-205ENST00000491094 STK31Q9BXU1 1019 aa13.63□□□□□ -0.23
VPS72-205ENST00000491094 ABCC3O15438 1527 aa13.63□□□□□ -0.23
VPS72-205ENST00000491094 MSH6P52701 1360 aa13.63□□□□□ -0.23
VPS72-205ENST00000491094 AK9Q5TCS8 1911 aa13.63□□□□□ -0.23
VPS72-205ENST00000491094 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
VPS72-205ENST00000491094 AMPHP49418 695 aa13.62□□□□□ -0.23
VPS72-205ENST00000491094 EIF2S2P20042 333 aaKnown RBP13.62□□□□□ -0.23
VPS72-205ENST00000491094 PDE1AP54750 535 aa13.62□□□□□ -0.23
VPS72-205ENST00000491094 DNTTIP2Q5QJE6 756 aaKnown RBP13.62□□□□□ -0.23
VPS72-205ENST00000491094 SLC26A8Q96RN1 970 aa13.62□□□□□ -0.23
VPS72-205ENST00000491094 COL3A1P02461 1466 aaPredicted RBP13.62□□□□□ -0.23
VPS72-205ENST00000491094 ARAP3Q8WWN8 1544 aa13.62□□□□□ -0.23
VPS72-205ENST00000491094 LRRC7Q96NW7 1537 aa13.62□□□□□ -0.23
VPS72-205ENST00000491094 VIRMAQ69YN4 1812 aaKnown RBP13.62□□□□□ -0.23
VPS72-205ENST00000491094 TMX3Q96JJ7 454 aa13.62□□□□□ -0.23
VPS72-205ENST00000491094 CAMSAP1Q5T5Y3 1602 aa13.62□□□□□ -0.23
VPS72-205ENST00000491094 BRPF1P55201 1214 aaPredicted RBP13.61□□□□□ -0.23
VPS72-205ENST00000491094 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
VPS72-205ENST00000491094 CD163L1Q9NR16 1453 aa13.61□□□□□ -0.23
VPS72-205ENST00000491094 NUTM1Q86Y26 1132 aa13.61□□□□□ -0.23
VPS72-205ENST00000491094 DDX54Q8TDD1 881 aaKnown RBP13.61□□□□□ -0.23
VPS72-205ENST00000491094 PALD1Q9ULE6 856 aa13.61□□□□□ -0.23
VPS72-205ENST00000491094 ABCA9Q8IUA7 1624 aa13.61□□□□□ -0.23
VPS72-205ENST00000491094 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
VPS72-205ENST00000491094 TMEM63CQ9P1W3 806 aa13.61□□□□□ -0.23
VPS72-205ENST00000491094 NCOA3Q9Y6Q9 1424 aa13.6□□□□□ -0.23
VPS72-205ENST00000491094 ZDHHC9Q9Y397 364 aa13.6□□□□□ -0.23
VPS72-205ENST00000491094 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
VPS72-205ENST00000491094 PNMA6EA0A0J9YXQ4 647 aa13.59□□□□□ -0.23
VPS72-205ENST00000491094 CHL1O00533 1208 aa13.59□□□□□ -0.23
VPS72-205ENST00000491094 GNAI2P04899 355 aa13.59□□□□□ -0.23
VPS72-205ENST00000491094 HAP1P54257 671 aaPredicted RBP13.59□□□□□ -0.23
VPS72-205ENST00000491094 MCCP23508 829 aa13.59□□□□□ -0.23
VPS72-205ENST00000491094 MTHFSDQ2M296 383 aaKnown RBP13.59□□□□□ -0.23
VPS72-205ENST00000491094 ADGRB2O60241 1585 aa13.59□□□□□ -0.23
VPS72-205ENST00000491094 CWC22Q9HCG8 908 aaKnown RBP13.59□□□□□ -0.23
VPS72-205ENST00000491094 MYO3AQ8NEV4 1616 aa13.58□□□□□ -0.23
VPS72-205ENST00000491094 PTPRMP28827 1452 aa13.58□□□□□ -0.23
VPS72-205ENST00000491094 CHMP3Q9Y3E7 222 aa13.58□□□□□ -0.24
VPS72-205ENST00000491094 RTL1A6NKG5 1358 aa13.58□□□□□ -0.24
VPS72-205ENST00000491094 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
VPS72-205ENST00000491094 LRRCC1Q9C099 1032 aa13.58□□□□□ -0.24
VPS72-205ENST00000491094 LRRFIP2Q9Y608 721 aaKnown RBP13.58□□□□□ -0.24
VPS72-205ENST00000491094 MLH3Q9UHC1 1453 aa13.58□□□□□ -0.24
VPS72-205ENST00000491094 ACEP12821 1306 aa13.58□□□□□ -0.24
VPS72-205ENST00000491094 NEXMIFQ5QGS0 1516 aa13.58□□□□□ -0.24
VPS72-205ENST00000491094 LMTK2Q8IWU2 1503 aa13.58□□□□□ -0.24
VPS72-205ENST00000491094 ZNF830Q96NB3 372 aaPredicted RBP13.58□□□□□ -0.24
VPS72-205ENST00000491094 UNC5CLQ8IV45 518 aa13.57□□□□□ -0.24
VPS72-205ENST00000491094 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
VPS72-205ENST00000491094 PPLO60437 1756 aa13.57□□□□□ -0.24
VPS72-205ENST00000491094 SURF6O75683 361 aaKnown RBP13.57□□□□□ -0.24
VPS72-205ENST00000491094 OS9Q13438 667 aaPredicted RBP13.57□□□□□ -0.24
VPS72-205ENST00000491094 FRMPD1Q5SYB0 1578 aa13.57□□□□□ -0.24
VPS72-205ENST00000491094 METP08581 1390 aa13.57□□□□□ -0.24
VPS72-205ENST00000491094 MX1P20591 662 aa13.56□□□□□ -0.24
VPS72-205ENST00000491094 USHBP1Q8N6Y0 703 aa13.56□□□□□ -0.24
VPS72-205ENST00000491094 ANXA1P04083 346 aa13.56□□□□□ -0.24
VPS72-205ENST00000491094 RRP9O43818 475 aaKnown RBP13.56□□□□□ -0.24
VPS72-205ENST00000491094 PRR36Q9H6K5 1346 aa13.55□□□□□ -0.24
VPS72-205ENST00000491094 GADD45BO75293 160 aaPredicted RBP13.55□□□□□ -0.24
VPS72-205ENST00000491094 ZMYND15Q9H091 742 aa13.55□□□□□ -0.24
VPS72-205ENST00000491094 TTC21BQ7Z4L5 1316 aa13.55□□□□□ -0.24
VPS72-205ENST00000491094 CPA1P15085 419 aa13.55□□□□□ -0.24
VPS72-205ENST00000491094 PPP1R9BQ96SB3 815 aa13.55□□□□□ -0.24
VPS72-205ENST00000491094 ESYT1Q9BSJ8 1104 aa13.55□□□□□ -0.24
VPS72-205ENST00000491094 FLIIQ13045 1269 aa13.55□□□□□ -0.24
VPS72-205ENST00000491094 IFT172Q9UG01 1749 aa13.55□□□□□ -0.24
VPS72-205ENST00000491094 ZNF445P59923 1031 aa13.54□□□□□ -0.24
VPS72-205ENST00000491094 NLRP6P59044 892 aa13.54□□□□□ -0.24
VPS72-205ENST00000491094 ZC3H13Q5T200 1668 aaKnown RBP13.54□□□□□ -0.24
VPS72-205ENST00000491094 ARHGEF28Q8N1W1 1705 aaKnown RBP13.54□□□□□ -0.24
VPS72-205ENST00000491094 MAP3K19Q56UN5 1328 aa13.53□□□□□ -0.24
VPS72-205ENST00000491094 CCT4P50991 539 aaKnown RBP13.53□□□□□ -0.24
VPS72-205ENST00000491094 MED14O60244 1454 aa13.53□□□□□ -0.24
VPS72-205ENST00000491094 PIK3R4Q99570 1358 aa13.53□□□□□ -0.24
VPS72-205ENST00000491094 SPG7Q9UQ90 795 aa13.53□□□□□ -0.24
VPS72-205ENST00000491094 FIBPO43427 364 aa13.53□□□□□ -0.24
VPS72-205ENST00000491094 UBTFL1P0CB47 393 aaPredicted RBP13.53□□□□□ -0.24
VPS72-205ENST00000491094 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.53□□□□□ -0.24
VPS72-205ENST00000491094 ARHGEF40Q8TER5 1519 aa13.53□□□□□ -0.24
VPS72-205ENST00000491094 PTPRCP08575 1304 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms