RNA–Protein interactions for RNA: ENST00000490821.1

ALMS1-205, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

TSL 5

Gene ALMS1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-205ENST00000490821 CENPJQ9HC77 1338 aaPredicted RBP11.39□□□□□ -0.59
ALMS1-205ENST00000490821 PCNTO95613 3336 aa11.39□□□□□ -0.59
ALMS1-205ENST00000490821 LTN1O94822 1766 aa11.39□□□□□ -0.59
ALMS1-205ENST00000490821 SLC27A3Q5K4L6 730 aa11.39□□□□□ -0.59
ALMS1-205ENST00000490821 GPBP1L1Q9HC44 474 aaPredicted RBP11.39□□□□□ -0.59
ALMS1-205ENST00000490821 ERBB3P21860 1342 aa11.38□□□□□ -0.59
ALMS1-205ENST00000490821 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
ALMS1-205ENST00000490821 KCNQ4P56696 695 aa11.38□□□□□ -0.59
ALMS1-205ENST00000490821 TFCP2L1Q9NZI6 479 aa11.38□□□□□ -0.59
ALMS1-205ENST00000490821 USP54Q70EL1 1684 aa11.37□□□□□ -0.59
ALMS1-205ENST00000490821 IL2RBP14784 551 aa11.37□□□□□ -0.59
ALMS1-205ENST00000490821 DOT1LQ8TEK3 1739 aa11.37□□□□□ -0.59
ALMS1-205ENST00000490821 MON2Q7Z3U7 1717 aa11.36□□□□□ -0.59
ALMS1-205ENST00000490821 ZNF526Q8TF50 670 aaPredicted RBP11.36□□□□□ -0.59
ALMS1-205ENST00000490821 TTC21AQ8NDW8 1320 aa11.35□□□□□ -0.59
ALMS1-205ENST00000490821 NLRP2Q9NX02 1062 aa11.35□□□□□ -0.59
ALMS1-205ENST00000490821 NSD2O96028 1365 aa11.35□□□□□ -0.59
ALMS1-205ENST00000490821 KIF3CO14782 793 aa11.34□□□□□ -0.59
ALMS1-205ENST00000490821 COL23A1Q86Y22 540 aaPredicted RBP11.34□□□□□ -0.59
ALMS1-205ENST00000490821 ZNF692Q9BU19 519 aaPredicted RBP11.34□□□□□ -0.59
ALMS1-205ENST00000490821 USP31Q70CQ4 1352 aa11.32□□□□□ -0.6
ALMS1-205ENST00000490821 ANKRD36BQ8N2N9 1353 aa11.32□□□□□ -0.6
ALMS1-205ENST00000490821 MSL1Q68DK7 614 aa11.32□□□□□ -0.6
ALMS1-205ENST00000490821 DNAJC5GQ8N7S2 189 aa11.32□□□□□ -0.6
ALMS1-205ENST00000490821 CD2APQ9Y5K6 639 aa11.32□□□□□ -0.6
ALMS1-205ENST00000490821 TAF1LQ8IZX4 1826 aa11.32□□□□□ -0.6
ALMS1-205ENST00000490821 C5P01031 1676 aa11.31□□□□□ -0.6
ALMS1-205ENST00000490821 FAM208AQ9UK61 1670 aaKnown RBP11.31□□□□□ -0.6
ALMS1-205ENST00000490821 PRIM1P49642 420 aaKnown RBP11.31□□□□□ -0.6
ALMS1-205ENST00000490821 DDX54Q8TDD1 881 aaKnown RBP11.31□□□□□ -0.6
ALMS1-205ENST00000490821 ANKRD24Q8TF21 1146 aa11.31□□□□□ -0.6
ALMS1-205ENST00000490821 EVC2Q86UK5 1308 aa11.31□□□□□ -0.6
ALMS1-205ENST00000490821 KTN1Q86UP2 1357 aaKnown RBP11.3□□□□□ -0.6
ALMS1-205ENST00000490821 APLP1P51693 650 aa11.3□□□□□ -0.6
ALMS1-205ENST00000490821 CCNL1Q9UK58 526 aaPredicted RBP11.3□□□□□ -0.6
ALMS1-205ENST00000490821 RGPD2P0DJD1 1756 aa11.29□□□□□ -0.6
ALMS1-205ENST00000490821 CICQ96RK0 1608 aaPredicted RBP11.29□□□□□ -0.6
ALMS1-205ENST00000490821 SYTL4Q96C24 671 aaPredicted RBP11.29□□□□□ -0.6
ALMS1-205ENST00000490821 WDR90Q96KV7 1748 aa11.29□□□□□ -0.6
ALMS1-205ENST00000490821 TOGARAM1Q9Y4F4 1720 aa11.29□□□□□ -0.6
ALMS1-205ENST00000490821 NME9Q86XW9 330 aa11.28□□□□□ -0.6
ALMS1-205ENST00000490821 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
ALMS1-205ENST00000490821 CD163L1Q9NR16 1453 aa11.27□□□□□ -0.6
ALMS1-205ENST00000490821 COL13A1Q5TAT6 717 aaPredicted RBP11.27□□□□□ -0.61
ALMS1-205ENST00000490821 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
ALMS1-205ENST00000490821 WWC3Q9ULE0 1092 aa11.27□□□□□ -0.61
ALMS1-205ENST00000490821 IGSF1Q8N6C5 1336 aa11.27□□□□□ -0.61
ALMS1-205ENST00000490821 UBR3Q6ZT12 1888 aa11.27□□□□□ -0.61
ALMS1-205ENST00000490821 MEGF6O75095 1541 aa11.25□□□□□ -0.61
ALMS1-205ENST00000490821 AMIGO3Q86WK7 504 aa11.25□□□□□ -0.61
ALMS1-205ENST00000490821 USP47Q96K76 1375 aa11.25□□□□□ -0.61
ALMS1-205ENST00000490821 C4BP0C0L5 1744 aa11.24□□□□□ -0.61
ALMS1-205ENST00000490821 KIAA1551Q9HCM1 1747 aa11.24□□□□□ -0.61
ALMS1-205ENST00000490821 TOMM70O94826 608 aa11.24□□□□□ -0.61
ALMS1-205ENST00000490821 IP6K1Q92551 441 aa11.24□□□□□ -0.61
ALMS1-205ENST00000490821 KIF13BQ9NQT8 1826 aa11.23□□□□□ -0.61
ALMS1-205ENST00000490821 ZCRB1Q8TBF4 217 aaKnown RBP11.23□□□□□ -0.61
ALMS1-205ENST00000490821 LTV1Q96GA3 475 aaPredicted RBP11.23□□□□□ -0.61
ALMS1-205ENST00000490821 ITGB4P16144 1822 aa11.22□□□□□ -0.61
ALMS1-205ENST00000490821 JMYQ8N9B5 988 aa11.22□□□□□ -0.61
ALMS1-205ENST00000490821 FLAD1Q8NFF5 587 aa11.22□□□□□ -0.61
ALMS1-205ENST00000490821 N4BP2Q86UW6 1770 aaPredicted RBP11.21□□□□□ -0.61
ALMS1-205ENST00000490821 PRELPP51888 382 aa11.21□□□□□ -0.61
ALMS1-205ENST00000490821 HTRA3P83110 453 aa11.21□□□□□ -0.61
ALMS1-205ENST00000490821 KLRG1Q96E93 195 aa11.21□□□□□ -0.61
ALMS1-205ENST00000490821 BRCA1P38398 1863 aaKnown RBP11.21□□□□□ -0.62
ALMS1-205ENST00000490821 MAP2P11137 1827 aaKnown RBP11.21□□□□□ -0.62
ALMS1-205ENST00000490821 EDC4Q6P2E9 1401 aaKnown RBP11.2□□□□□ -0.62
ALMS1-205ENST00000490821 PALLDQ8WX93 1383 aa11.2□□□□□ -0.62
ALMS1-205ENST00000490821 SMIM5Q71RC9 77 aa11.2□□□□□ -0.62
ALMS1-205ENST00000490821 NMRK2Q9NPI5 230 aa11.2□□□□□ -0.62
ALMS1-205ENST00000490821 PXDNLA1KZ92 1463 aa11.19□□□□□ -0.62
ALMS1-205ENST00000490821 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
ALMS1-205ENST00000490821 HOXC9P31274 260 aa11.18□□□□□ -0.62
ALMS1-205ENST00000490821 TNS4Q8IZW8 715 aa11.18□□□□□ -0.62
ALMS1-205ENST00000490821 RBM46Q8TBY0 533 aaKnown RBP11.18□□□□□ -0.62
ALMS1-205ENST00000490821 A0A1W2PP64 1363 aa11.17□□□□□ -0.62
ALMS1-205ENST00000490821 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
ALMS1-205ENST00000490821 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.17□□□□□ -0.62
ALMS1-205ENST00000490821 PHF14O94880 888 aa11.17□□□□□ -0.62
ALMS1-205ENST00000490821 FBLN1P23142 703 aa11.17□□□□□ -0.62
ALMS1-205ENST00000490821 L3MBTL2Q969R5 705 aa11.17□□□□□ -0.62
ALMS1-205ENST00000490821 AK7Q96M32 723 aa11.17□□□□□ -0.62
ALMS1-205ENST00000490821 SLC12A5Q9H2X9 1139 aa11.17□□□□□ -0.62
ALMS1-205ENST00000490821 PKD1L3Q7Z443 1732 aa11.17□□□□□ -0.62
ALMS1-205ENST00000490821 HDGFL2Q7Z4V5 671 aaPredicted RBP11.16□□□□□ -0.62
ALMS1-205ENST00000490821 ARFGEF1Q9Y6D6 1849 aa11.16□□□□□ -0.62
ALMS1-205ENST00000490821 CGNL1Q0VF96 1302 aa11.15□□□□□ -0.62
ALMS1-205ENST00000490821 HMGB2P26583 209 aaKnown RBP11.15□□□□□ -0.62
ALMS1-205ENST00000490821 SSFA2P28290 1259 aa11.15□□□□□ -0.62
ALMS1-205ENST00000490821 NBPF6Q5VWK0 638 aa11.15□□□□□ -0.62
ALMS1-205ENST00000490821 MPRIPQ6WCQ1 1025 aa11.15□□□□□ -0.62
ALMS1-205ENST00000490821 TMC1Q8TDI8 760 aa11.15□□□□□ -0.62
ALMS1-205ENST00000490821 NBPF4Q96M43 638 aa11.15□□□□□ -0.62
ALMS1-205ENST00000490821 NSD3Q9BZ95 1437 aa11.15□□□□□ -0.62
ALMS1-205ENST00000490821 FSTL1Q12841 308 aa11.14□□□□□ -0.63
ALMS1-205ENST00000490821 USHBP1Q8N6Y0 703 aa11.14□□□□□ -0.63
ALMS1-205ENST00000490821 BCS1LQ9Y276 419 aa11.14□□□□□ -0.63
ALMS1-205ENST00000490821 SBF1O95248 1867 aa11.14□□□□□ -0.63
ALMS1-205ENST00000490821 C10orf71Q711Q0 1435 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms