RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), humanhuman

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4A-256ENST00000490663 MTHFSP49914 203 aa25.23■■□□□ 1.63
C4A-256ENST00000490663 FAM196AQ6ZSG2 479 aa25.23■■□□□ 1.63
C4A-256ENST00000490663 COL3A1P02461 1466 aaPredicted RBP25.22■■□□□ 1.63
C4A-256ENST00000490663 RGPD3A6NKT7 1758 aaPredicted RBP25.21■■□□□ 1.63
C4A-256ENST00000490663 RGPD4Q7Z3J3 1758 aa25.21■■□□□ 1.63
C4A-256ENST00000490663 PTF1AQ7RTS3 328 aa25.2■■□□□ 1.62
C4A-256ENST00000490663 SF3B2Q13435 895 aaKnown RBP25.19■■□□□ 1.62
C4A-256ENST00000490663 DDX54Q8TDD1 881 aaKnown RBP25.19■■□□□ 1.62
C4A-256ENST00000490663 RAPGEF4Q8WZA2 1011 aa25.19■■□□□ 1.62
C4A-256ENST00000490663 TATP17735 454 aaPredicted RBP25.18■■□□□ 1.62
C4A-256ENST00000490663 ACSBG1Q96GR2 724 aa25.17■■□□□ 1.62
C4A-256ENST00000490663 IGSF1Q8N6C5 1336 aa25.16■■□□□ 1.62
C4A-256ENST00000490663 CCDC125Q86Z20 511 aa25.16■■□□□ 1.62
C4A-256ENST00000490663 AEBP1Q8IUX7 1158 aa25.15■■□□□ 1.62
C4A-256ENST00000490663 ZCRB1Q8TBF4 217 aaKnown RBP25.15■■□□□ 1.62
C4A-256ENST00000490663 EN1Q05925 392 aaPredicted RBP25.14■■□□□ 1.62
C4A-256ENST00000490663 IL13P35225 146 aa25.13■■□□□ 1.61
C4A-256ENST00000490663 SCN11AQ9UI33 1791 aa25.13■■□□□ 1.61
C4A-256ENST00000490663 KCNQ2O43526 872 aa25.12■■□□□ 1.61
C4A-256ENST00000490663 APBA3O96018 575 aa25.12■■□□□ 1.61
C4A-256ENST00000490663 PPP2R1AP30153 589 aa25.12■■□□□ 1.61
C4A-256ENST00000490663 LY75O60449 1722 aa25.12■■□□□ 1.61
C4A-256ENST00000490663 PARD3Q8TEW0 1356 aa25.11■■□□□ 1.61
C4A-256ENST00000490663 BAG6P46379 1132 aa25.11■■□□□ 1.61
C4A-256ENST00000490663 BCL9O00512 1426 aa25.11■■□□□ 1.61
C4A-256ENST00000490663 DLG5Q8TDM6 1919 aa25.1■■□□□ 1.61
C4A-256ENST00000490663 EZH2Q15910 746 aaKnown RBP25.09■■□□□ 1.61
C4A-256ENST00000490663 SULT6B1Q6IMI4 303 aa25.08■■□□□ 1.61
C4A-256ENST00000490663 DIAPH1O60610 1272 aaKnown RBP25.07■■□□□ 1.6
C4A-256ENST00000490663 HMOX1P09601 288 aa25.07■■□□□ 1.6
C4A-256ENST00000490663 PCDH11XQ9BZA7 1347 aa25.07■■□□□ 1.6
C4A-256ENST00000490663 PCDH11YQ9BZA8 1340 aa25.07■■□□□ 1.6
C4A-256ENST00000490663 ZNF316A6NFI3 1004 aaPredicted RBP25.06■■□□□ 1.6
C4A-256ENST00000490663 CYP27B1O15528 508 aa25.06■■□□□ 1.6
C4A-256ENST00000490663 TAF1LQ8IZX4 1826 aa25.05■■□□□ 1.6
C4A-256ENST00000490663 TUBGCP6Q96RT7 1819 aa25.05■■□□□ 1.6
C4A-256ENST00000490663 BCL11BQ9C0K0 894 aaPredicted RBP25.04■■□□□ 1.6
C4A-256ENST00000490663 KDRP35968 1356 aa25.04■■□□□ 1.6
C4A-256ENST00000490663 U2SURPO15042 1029 aaKnown RBP25.03■■□□□ 1.6
C4A-256ENST00000490663 SYTL4Q96C24 671 aaPredicted RBP25.03■■□□□ 1.6
C4A-256ENST00000490663 CAMKK2Q96RR4 588 aa25.02■■□□□ 1.6
C4A-256ENST00000490663 SPG7Q9UQ90 795 aa25.02■■□□□ 1.6
C4A-256ENST00000490663 CFAP53Q96M91 514 aa25■■□□□ 1.59
C4A-256ENST00000490663 PRIM1P49642 420 aaKnown RBP24.99■■□□□ 1.59
C4A-256ENST00000490663 C5P01031 1676 aa24.97■■□□□ 1.59
C4A-256ENST00000490663 PHKG2P15735 406 aa24.97■■□□□ 1.59
C4A-256ENST00000490663 ZNF530Q6P9A1 599 aaPredicted RBP24.97■■□□□ 1.59
C4A-256ENST00000490663 PAPPAQ13219 1627 aa24.97■■□□□ 1.59
C4A-256ENST00000490663 SIPA1L3O60292 1781 aaPredicted RBP24.95■■□□□ 1.59
C4A-256ENST00000490663 PLEKHO1Q53GL0 409 aaPredicted RBP24.95■■□□□ 1.58
C4A-256ENST00000490663 KDM6AO15550 1401 aaPredicted RBP24.95■■□□□ 1.58
C4A-256ENST00000490663 ADAMTS7Q9UKP4 1686 aa24.94■■□□□ 1.58
C4A-256ENST00000490663 IFNL2Q8IZJ0 200 aa24.94■■□□□ 1.58
C4A-256ENST00000490663 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.94■■□□□ 1.58
C4A-256ENST00000490663 PSDA5PKW4 1024 aaPredicted RBP24.93■■□□□ 1.58
C4A-256ENST00000490663 RALBP1Q15311 655 aa24.92■■□□□ 1.58
C4A-256ENST00000490663 PLEKHG2Q9H7P9 1386 aa24.92■■□□□ 1.58
C4A-256ENST00000490663 PLSCR1O15162 318 aa24.91■■□□□ 1.58
C4A-256ENST00000490663 MPRIPQ6WCQ1 1025 aa24.91■■□□□ 1.58
C4A-256ENST00000490663 PROM2Q8N271 834 aa24.91■■□□□ 1.58
C4A-256ENST00000490663 U2AF1L5P0DN76 240 aaPredicted RBP24.9■■□□□ 1.58
C4A-256ENST00000490663 U2AF1Q01081 240 aaKnown RBP eCLIP24.9■■□□□ 1.58
C4A-256ENST00000490663 MYBBP1AQ9BQG0 1328 aaKnown RBP24.89■■□□□ 1.58
C4A-256ENST00000490663 KCNQ4P56696 695 aa24.89■■□□□ 1.58
C4A-256ENST00000490663 NKX1-1Q15270 411 aaPredicted RBP24.89■■□□□ 1.58
C4A-256ENST00000490663 TXNRD1Q16881 649 aa24.89■■□□□ 1.58
C4A-256ENST00000490663 AMOTQ4VCS5 1084 aa24.89■■□□□ 1.58
C4A-256ENST00000490663 CASZ1Q86V15 1759 aa24.89■■□□□ 1.57
C4A-256ENST00000490663 QSER1Q2KHR3 1735 aa24.89■■□□□ 1.57
C4A-256ENST00000490663 RSPH6AQ9H0K4 717 aa24.88■■□□□ 1.57
C4A-256ENST00000490663 PRKRIP1Q9H875 184 aaPredicted RBP24.88■■□□□ 1.57
C4A-256ENST00000490663 PRKAR2BP31323 418 aa24.87■■□□□ 1.57
C4A-256ENST00000490663 MTHFSDQ2M296 383 aaKnown RBP24.87■■□□□ 1.57
C4A-256ENST00000490663 C1orf141Q5JVX7 400 aa24.87■■□□□ 1.57
C4A-256ENST00000490663 ANO8Q9HCE9 1232 aaPredicted RBP24.87■■□□□ 1.57
C4A-256ENST00000490663 NUDCQ9Y266 331 aa24.87■■□□□ 1.57
C4A-256ENST00000490663 R3HDM1Q15032 1099 aaKnown RBP24.86■■□□□ 1.57
C4A-256ENST00000490663 COL5A3P25940 1745 aaPredicted RBP24.86■■□□□ 1.57
C4A-256ENST00000490663 PIGBQ92521 554 aa24.84■■□□□ 1.57
C4A-256ENST00000490663 PHACTR3Q96KR7 559 aa24.84■■□□□ 1.57
C4A-256ENST00000490663 TJP1Q07157 1748 aa24.83■■□□□ 1.57
C4A-256ENST00000490663 UBR3Q6ZT12 1888 aa24.83■■□□□ 1.57
C4A-256ENST00000490663 UBR2Q8IWV8 1755 aa24.83■■□□□ 1.57
C4A-256ENST00000490663 LRRC4BQ9NT99 713 aa24.83■■□□□ 1.57
C4A-256ENST00000490663 TMOD3Q9NYL9 352 aa24.83■■□□□ 1.57
C4A-256ENST00000490663 C4BP0C0L5 1744 aa24.82■■□□□ 1.56
C4A-256ENST00000490663 MRC1P22897 1456 aa24.82■■□□□ 1.56
C4A-256ENST00000490663 PALLDQ8WX93 1383 aa24.81■■□□□ 1.56
C4A-256ENST00000490663 DCAF5Q96JK2 942 aa24.81■■□□□ 1.56
C4A-256ENST00000490663 LGR6Q9HBX8 967 aa24.81■■□□□ 1.56
C4A-256ENST00000490663 MYH14Q7Z406 1995 aaKnown RBP24.8■■□□□ 1.56
C4A-256ENST00000490663 AKAP4Q5JQC9 854 aa24.8■■□□□ 1.56
C4A-256ENST00000490663 HSP90AB1P08238 724 aaKnown RBP24.79■■□□□ 1.56
C4A-256ENST00000490663 ASAP1Q9ULH1 1129 aa24.79■■□□□ 1.56
C4A-256ENST00000490663 MAP3K5Q99683 1374 aa24.79■■□□□ 1.56
C4A-256ENST00000490663 ZNF831Q5JPB2 1677 aa24.78■■□□□ 1.56
C4A-256ENST00000490663 RNMTO43148 476 aaKnown RBP24.76■■□□□ 1.55
C4A-256ENST00000490663 CABP4P57796 275 aa24.76■■□□□ 1.55
C4A-256ENST00000490663 ZNF827Q17R98 1081 aa24.76■■□□□ 1.55
C4A-256ENST00000490663 NBPF14Q5TI25 921 aa24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms